Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3I56:0580:0553
Extra
PDB:
ATOM 1 O3' A A 579 -6.233 103.765 106.440 1.00 52.81 O
ATOM 2 P G A 580 -6.209 104.233 104.901 1.00 52.28 P
ATOM 3 OP1 G A 580 -5.898 105.687 104.883 1.00 49.61 O
ATOM 4 OP2 G A 580 -7.442 103.735 104.235 1.00 51.46 O
ATOM 5 O5' G A 580 -4.991 103.425 104.269 1.00 52.64 O
ATOM 6 C5' G A 580 -3.625 103.746 104.595 1.00 51.65 C
ATOM 7 C4' G A 580 -2.695 102.747 103.953 1.00 51.18 C
ATOM 8 O4' G A 580 -2.992 101.427 104.472 1.00 51.90 O
ATOM 9 C3' G A 580 -2.845 102.590 102.449 1.00 50.53 C
ATOM 10 O3' G A 580 -2.082 103.554 101.751 1.00 48.58 O
ATOM 11 C2' G A 580 -2.293 101.194 102.215 1.00 51.55 C
ATOM 12 O2' G A 580 -0.882 101.161 102.202 1.00 53.13 O
ATOM 13 C1' G A 580 -2.812 100.461 103.451 1.00 52.21 C
ATOM 14 N9 G A 580 -4.101 99.838 103.191 1.00 54.23 N
ATOM 15 C8 G A 580 -5.346 100.358 103.460 1.00 55.92 C
ATOM 16 N7 G A 580 -6.318 99.572 103.088 1.00 57.81 N
ATOM 17 C5 G A 580 -5.675 98.466 102.547 1.00 56.48 C
ATOM 18 C6 G A 580 -6.206 97.288 101.981 1.00 56.62 C
ATOM 19 O6 G A 580 -7.391 96.966 101.850 1.00 58.28 O
ATOM 20 N1 G A 580 -5.202 96.432 101.546 1.00 56.20 N
ATOM 21 C2 G A 580 -3.857 96.675 101.654 1.00 56.33 C
ATOM 22 N2 G A 580 -3.045 95.723 101.181 1.00 56.51 N
ATOM 23 N3 G A 580 -3.347 97.769 102.189 1.00 56.12 N
ATOM 24 C4 G A 580 -4.307 98.616 102.608 1.00 55.48 C
ATOM 25 P A A 581 -2.785 104.888 101.218 1.00 47.97 P
ATOM 26 OP1 A A 581 -2.812 105.845 102.357 1.00 46.87 O
ATOM 27 OP2 A A 581 -4.045 104.518 100.529 1.00 47.78 O
ATOM 28 O5' A A 581 -1.774 105.437 100.121 1.00 48.97 O
TER
ATOM 1 O3' G B 552 -5.707 94.818 96.980 1.00 43.52 O
ATOM 2 P A B 553 -5.182 93.884 98.180 1.00 42.63 P
ATOM 3 OP1 A B 553 -5.769 92.536 97.984 1.00 41.15 O
ATOM 4 OP2 A B 553 -5.359 94.589 99.477 1.00 41.58 O
ATOM 5 O5' A B 553 -3.624 93.745 97.893 1.00 42.25 O
ATOM 6 C5' A B 553 -3.156 93.033 96.733 1.00 44.01 C
ATOM 7 C4' A B 553 -1.658 93.158 96.605 1.00 43.11 C
ATOM 8 O4' A B 553 -1.299 94.519 96.256 1.00 42.94 O
ATOM 9 C3' A B 553 -0.874 92.879 97.872 1.00 43.25 C
ATOM 10 O3' A B 553 -0.704 91.478 98.048 1.00 44.69 O
ATOM 11 C2' A B 553 0.438 93.600 97.596 1.00 42.70 C
ATOM 12 O2' A B 553 1.256 92.838 96.730 1.00 42.17 O
ATOM 13 C1' A B 553 -0.049 94.841 96.840 1.00 41.92 C
ATOM 14 N9 A B 553 -0.200 96.078 97.614 1.00 40.88 N
ATOM 15 C8 A B 553 -1.360 96.639 98.093 1.00 41.17 C
ATOM 16 N7 A B 553 -1.182 97.790 98.699 1.00 42.60 N
ATOM 17 C5 A B 553 0.190 97.999 98.626 1.00 42.74 C
ATOM 18 C6 A B 553 1.027 99.057 99.077 1.00 42.21 C
ATOM 19 N6 A B 553 0.588 100.142 99.716 1.00 42.08 N
ATOM 20 N1 A B 553 2.348 98.954 98.841 1.00 40.85 N
ATOM 21 C2 A B 553 2.798 97.869 98.202 1.00 42.27 C
ATOM 22 N3 A B 553 2.122 96.816 97.731 1.00 41.69 N
ATOM 23 C4 A B 553 0.808 96.944 97.975 1.00 41.65 C
ATOM 24 P A B 554 -0.829 90.834 99.519 1.00 46.33 P
ATOM 25 OP1 A B 554 -0.923 89.355 99.344 1.00 43.48 O
ATOM 26 OP2 A B 554 -1.884 91.558 100.277 1.00 45.90 O
ATOM 27 O5' A B 554 0.560 91.180 100.218 1.00 44.71 O
TER
ATOM 2 P G A 580 -6.209 104.233 104.901 1.00 52.28 P
ATOM 3 OP1 G A 580 -5.898 105.687 104.883 1.00 49.61 O
ATOM 4 OP2 G A 580 -7.442 103.735 104.235 1.00 51.46 O
ATOM 5 O5' G A 580 -4.991 103.425 104.269 1.00 52.64 O
ATOM 6 C5' G A 580 -3.625 103.746 104.595 1.00 51.65 C
ATOM 7 C4' G A 580 -2.695 102.747 103.953 1.00 51.18 C
ATOM 8 O4' G A 580 -2.992 101.427 104.472 1.00 51.90 O
ATOM 9 C3' G A 580 -2.845 102.590 102.449 1.00 50.53 C
ATOM 10 O3' G A 580 -2.082 103.554 101.751 1.00 48.58 O
ATOM 11 C2' G A 580 -2.293 101.194 102.215 1.00 51.55 C
ATOM 12 O2' G A 580 -0.882 101.161 102.202 1.00 53.13 O
ATOM 13 C1' G A 580 -2.812 100.461 103.451 1.00 52.21 C
ATOM 14 N9 G A 580 -4.101 99.838 103.191 1.00 54.23 N
ATOM 15 C8 G A 580 -5.346 100.358 103.460 1.00 55.92 C
ATOM 16 N7 G A 580 -6.318 99.572 103.088 1.00 57.81 N
ATOM 17 C5 G A 580 -5.675 98.466 102.547 1.00 56.48 C
ATOM 18 C6 G A 580 -6.206 97.288 101.981 1.00 56.62 C
ATOM 19 O6 G A 580 -7.391 96.966 101.850 1.00 58.28 O
ATOM 20 N1 G A 580 -5.202 96.432 101.546 1.00 56.20 N
ATOM 21 C2 G A 580 -3.857 96.675 101.654 1.00 56.33 C
ATOM 22 N2 G A 580 -3.045 95.723 101.181 1.00 56.51 N
ATOM 23 N3 G A 580 -3.347 97.769 102.189 1.00 56.12 N
ATOM 24 C4 G A 580 -4.307 98.616 102.608 1.00 55.48 C
ATOM 25 P A A 581 -2.785 104.888 101.218 1.00 47.97 P
ATOM 26 OP1 A A 581 -2.812 105.845 102.357 1.00 46.87 O
ATOM 27 OP2 A A 581 -4.045 104.518 100.529 1.00 47.78 O
ATOM 28 O5' A A 581 -1.774 105.437 100.121 1.00 48.97 O
TER
ATOM 1 O3' G B 552 -5.707 94.818 96.980 1.00 43.52 O
ATOM 2 P A B 553 -5.182 93.884 98.180 1.00 42.63 P
ATOM 3 OP1 A B 553 -5.769 92.536 97.984 1.00 41.15 O
ATOM 4 OP2 A B 553 -5.359 94.589 99.477 1.00 41.58 O
ATOM 5 O5' A B 553 -3.624 93.745 97.893 1.00 42.25 O
ATOM 6 C5' A B 553 -3.156 93.033 96.733 1.00 44.01 C
ATOM 7 C4' A B 553 -1.658 93.158 96.605 1.00 43.11 C
ATOM 8 O4' A B 553 -1.299 94.519 96.256 1.00 42.94 O
ATOM 9 C3' A B 553 -0.874 92.879 97.872 1.00 43.25 C
ATOM 10 O3' A B 553 -0.704 91.478 98.048 1.00 44.69 O
ATOM 11 C2' A B 553 0.438 93.600 97.596 1.00 42.70 C
ATOM 12 O2' A B 553 1.256 92.838 96.730 1.00 42.17 O
ATOM 13 C1' A B 553 -0.049 94.841 96.840 1.00 41.92 C
ATOM 14 N9 A B 553 -0.200 96.078 97.614 1.00 40.88 N
ATOM 15 C8 A B 553 -1.360 96.639 98.093 1.00 41.17 C
ATOM 16 N7 A B 553 -1.182 97.790 98.699 1.00 42.60 N
ATOM 17 C5 A B 553 0.190 97.999 98.626 1.00 42.74 C
ATOM 18 C6 A B 553 1.027 99.057 99.077 1.00 42.21 C
ATOM 19 N6 A B 553 0.588 100.142 99.716 1.00 42.08 N
ATOM 20 N1 A B 553 2.348 98.954 98.841 1.00 40.85 N
ATOM 21 C2 A B 553 2.798 97.869 98.202 1.00 42.27 C
ATOM 22 N3 A B 553 2.122 96.816 97.731 1.00 41.69 N
ATOM 23 C4 A B 553 0.808 96.944 97.975 1.00 41.65 C
ATOM 24 P A B 554 -0.829 90.834 99.519 1.00 46.33 P
ATOM 25 OP1 A B 554 -0.923 89.355 99.344 1.00 43.48 O
ATOM 26 OP2 A B 554 -1.884 91.558 100.277 1.00 45.90 O
ATOM 27 O5' A B 554 0.560 91.180 100.218 1.00 44.71 O
TER
Atoms:
OP1: (-5.898,105.687,104.883)
OP2: (-7.442,103.735,104.235)
C3': (-2.845,102.590,102.449)
C1': (-2.812,100.461,103.451)
C5': (-3.625,103.746,104.595)
O6: (-7.391,96.966,101.850)
O4': (-2.992,101.427,104.472)
C8: (-5.346,100.358,103.460)
C2: (-3.857,96.675,101.654)
C6: (-6.206,97.288,101.981)
C5: (-5.675,98.466,102.547)
C4: (-4.307,98.616,102.608)
P: (-6.209,104.233,104.901)
C4': (-2.695,102.747,103.953)
C2': (-2.293,101.194,102.215)
O2': (-0.882,101.161,102.202)
N1: (-5.202,96.432,101.546)
N2: (-3.045,95.723,101.181)
N3: (-3.347,97.769,102.189)
N7: (-6.318,99.572,103.088)
N9: (-4.101,99.838,103.191)
O5': (-4.991,103.425,104.269)
O3': (-2.082,103.554,101.751)
OP2: (-7.442,103.735,104.235)
C3': (-2.845,102.590,102.449)
C1': (-2.812,100.461,103.451)
C5': (-3.625,103.746,104.595)
O6: (-7.391,96.966,101.850)
O4': (-2.992,101.427,104.472)
C8: (-5.346,100.358,103.460)
C2: (-3.857,96.675,101.654)
C6: (-6.206,97.288,101.981)
C5: (-5.675,98.466,102.547)
C4: (-4.307,98.616,102.608)
P: (-6.209,104.233,104.901)
C4': (-2.695,102.747,103.953)
C2': (-2.293,101.194,102.215)
O2': (-0.882,101.161,102.202)
N1: (-5.202,96.432,101.546)
N2: (-3.045,95.723,101.181)
N3: (-3.347,97.769,102.189)
N7: (-6.318,99.572,103.088)
N9: (-4.101,99.838,103.191)
O5': (-4.991,103.425,104.269)
O3': (-2.082,103.554,101.751)
OP1: (-5.769,92.536,97.984)
OP2: (-5.359,94.589,99.477)
C3': (-0.874,92.879,97.872)
C1': (-0.049,94.841,96.840)
C5': (-3.156,93.033,96.733)
O4': (-1.299,94.519,96.256)
C8: (-1.360,96.639,98.093)
O2': (1.256,92.838,96.730)
C6: (1.027,99.057,99.077)
C5: (0.190,97.999,98.626)
C4: (0.808,96.944,97.975)
P: (-5.182,93.884,98.180)
C4': (-1.658,93.158,96.605)
C2': (0.438,93.600,97.596)
C2: (2.798,97.869,98.202)
N1: (2.348,98.954,98.841)
N3: (2.122,96.816,97.731)
N6: (0.588,100.142,99.716)
N7: (-1.182,97.790,98.699)
N9: (-0.200,96.078,97.614)
O5': (-3.624,93.745,97.893)
O3': (-0.704,91.478,98.048)
OP2: (-5.359,94.589,99.477)
C3': (-0.874,92.879,97.872)
C1': (-0.049,94.841,96.840)
C5': (-3.156,93.033,96.733)
O4': (-1.299,94.519,96.256)
C8: (-1.360,96.639,98.093)
O2': (1.256,92.838,96.730)
C6: (1.027,99.057,99.077)
C5: (0.190,97.999,98.626)
C4: (0.808,96.944,97.975)
P: (-5.182,93.884,98.180)
C4': (-1.658,93.158,96.605)
C2': (0.438,93.600,97.596)
C2: (2.798,97.869,98.202)
N1: (2.348,98.954,98.841)
N3: (2.122,96.816,97.731)
N6: (0.588,100.142,99.716)
N7: (-1.182,97.790,98.699)
N9: (-0.200,96.078,97.614)
O5': (-3.624,93.745,97.893)
O3': (-0.704,91.478,98.048)
Image (generated by PyMOL):