Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:0580:0553
Extra
PDB:
ATOM 1 O3' A A 579 -6.429 103.573 106.133 1.00 73.44 O
ATOM 2 P G A 580 -6.367 104.064 104.604 1.00 72.82 P
ATOM 3 OP1 G A 580 -5.955 105.493 104.637 1.00 70.35 O
ATOM 4 OP2 G A 580 -7.625 103.669 103.916 1.00 72.44 O
ATOM 5 O5' G A 580 -5.207 103.181 103.962 1.00 73.38 O
ATOM 6 C5' G A 580 -3.826 103.389 104.314 1.00 70.17 C
ATOM 7 C4' G A 580 -2.957 102.397 103.588 1.00 68.98 C
ATOM 8 O4' G A 580 -3.297 101.057 104.024 1.00 68.63 O
ATOM 9 C3' G A 580 -3.137 102.347 102.081 1.00 68.30 C
ATOM 10 O3' G A 580 -2.356 103.334 101.431 1.00 70.50 O
ATOM 11 C2' G A 580 -2.623 100.955 101.743 1.00 68.29 C
ATOM 12 O2' G A 580 -1.217 100.883 101.671 1.00 68.78 O
ATOM 13 C1' G A 580 -3.119 100.149 102.946 1.00 68.22 C
ATOM 14 N9 G A 580 -4.397 99.508 102.667 1.00 67.93 N
ATOM 15 C8 G A 580 -5.653 100.023 102.889 1.00 68.56 C
ATOM 16 N7 G A 580 -6.608 99.228 102.491 1.00 69.05 N
ATOM 17 C5 G A 580 -5.942 98.119 101.989 1.00 66.65 C
ATOM 18 C6 G A 580 -6.449 96.933 101.421 1.00 66.50 C
ATOM 19 O6 G A 580 -7.624 96.607 101.246 1.00 70.28 O
ATOM 20 N1 G A 580 -5.430 96.074 101.036 1.00 66.53 N
ATOM 21 C2 G A 580 -4.092 96.324 101.182 1.00 66.91 C
ATOM 22 N2 G A 580 -3.265 95.372 100.735 1.00 66.52 N
ATOM 23 N3 G A 580 -3.602 97.427 101.722 1.00 66.23 N
ATOM 24 C4 G A 580 -4.578 98.275 102.098 1.00 66.56 C
ATOM 25 P A A 581 -3.040 104.692 100.911 1.00 72.67 P
ATOM 26 OP1 A A 581 -2.995 105.665 102.037 1.00 71.61 O
ATOM 27 OP2 A A 581 -4.334 104.389 100.253 1.00 73.08 O
ATOM 28 O5' A A 581 -2.035 105.201 99.786 1.00 74.19 O
TER
ATOM 1 O3' G B 552 -5.929 94.719 96.586 1.00 67.07 O
ATOM 2 P A B 553 -5.483 93.718 97.762 1.00 67.26 P
ATOM 3 OP1 A B 553 -6.125 92.409 97.492 1.00 66.40 O
ATOM 4 OP2 A B 553 -5.658 94.369 99.091 1.00 64.76 O
ATOM 5 O5' A B 553 -3.927 93.514 97.489 1.00 67.57 O
ATOM 6 C5' A B 553 -3.481 92.839 96.293 1.00 66.81 C
ATOM 7 C4' A B 553 -1.979 92.938 96.148 1.00 65.40 C
ATOM 8 O4' A B 553 -1.583 94.280 95.763 1.00 64.96 O
ATOM 9 C3' A B 553 -1.165 92.668 97.398 1.00 64.17 C
ATOM 10 O3' A B 553 -1.044 91.278 97.644 1.00 63.05 O
ATOM 11 C2' A B 553 0.166 93.313 97.045 1.00 62.48 C
ATOM 12 O2' A B 553 0.896 92.499 96.148 1.00 60.72 O
ATOM 13 C1' A B 553 -0.301 94.565 96.303 1.00 62.00 C
ATOM 14 N9 A B 553 -0.410 95.767 97.130 1.00 60.57 N
ATOM 15 C8 A B 553 -1.546 96.310 97.672 1.00 59.93 C
ATOM 16 N7 A B 553 -1.340 97.431 98.319 1.00 60.47 N
ATOM 17 C5 A B 553 0.026 97.637 98.206 1.00 59.89 C
ATOM 18 C6 A B 553 0.871 98.668 98.664 1.00 61.42 C
ATOM 19 N6 A B 553 0.445 99.728 99.353 1.00 61.40 N
ATOM 20 N1 A B 553 2.187 98.571 98.385 1.00 61.23 N
ATOM 21 C2 A B 553 2.616 97.508 97.692 1.00 61.38 C
ATOM 22 N3 A B 553 1.923 96.483 97.204 1.00 61.08 N
ATOM 23 C4 A B 553 0.616 96.609 97.495 1.00 61.00 C
ATOM 24 P A B 554 -1.171 90.729 99.146 1.00 62.67 P
ATOM 25 OP1 A B 554 -1.340 89.249 99.050 1.00 60.79 O
ATOM 26 OP2 A B 554 -2.189 91.553 99.851 1.00 61.89 O
ATOM 27 O5' A B 554 0.240 91.057 99.819 1.00 64.87 O
TER
ATOM 2 P G A 580 -6.367 104.064 104.604 1.00 72.82 P
ATOM 3 OP1 G A 580 -5.955 105.493 104.637 1.00 70.35 O
ATOM 4 OP2 G A 580 -7.625 103.669 103.916 1.00 72.44 O
ATOM 5 O5' G A 580 -5.207 103.181 103.962 1.00 73.38 O
ATOM 6 C5' G A 580 -3.826 103.389 104.314 1.00 70.17 C
ATOM 7 C4' G A 580 -2.957 102.397 103.588 1.00 68.98 C
ATOM 8 O4' G A 580 -3.297 101.057 104.024 1.00 68.63 O
ATOM 9 C3' G A 580 -3.137 102.347 102.081 1.00 68.30 C
ATOM 10 O3' G A 580 -2.356 103.334 101.431 1.00 70.50 O
ATOM 11 C2' G A 580 -2.623 100.955 101.743 1.00 68.29 C
ATOM 12 O2' G A 580 -1.217 100.883 101.671 1.00 68.78 O
ATOM 13 C1' G A 580 -3.119 100.149 102.946 1.00 68.22 C
ATOM 14 N9 G A 580 -4.397 99.508 102.667 1.00 67.93 N
ATOM 15 C8 G A 580 -5.653 100.023 102.889 1.00 68.56 C
ATOM 16 N7 G A 580 -6.608 99.228 102.491 1.00 69.05 N
ATOM 17 C5 G A 580 -5.942 98.119 101.989 1.00 66.65 C
ATOM 18 C6 G A 580 -6.449 96.933 101.421 1.00 66.50 C
ATOM 19 O6 G A 580 -7.624 96.607 101.246 1.00 70.28 O
ATOM 20 N1 G A 580 -5.430 96.074 101.036 1.00 66.53 N
ATOM 21 C2 G A 580 -4.092 96.324 101.182 1.00 66.91 C
ATOM 22 N2 G A 580 -3.265 95.372 100.735 1.00 66.52 N
ATOM 23 N3 G A 580 -3.602 97.427 101.722 1.00 66.23 N
ATOM 24 C4 G A 580 -4.578 98.275 102.098 1.00 66.56 C
ATOM 25 P A A 581 -3.040 104.692 100.911 1.00 72.67 P
ATOM 26 OP1 A A 581 -2.995 105.665 102.037 1.00 71.61 O
ATOM 27 OP2 A A 581 -4.334 104.389 100.253 1.00 73.08 O
ATOM 28 O5' A A 581 -2.035 105.201 99.786 1.00 74.19 O
TER
ATOM 1 O3' G B 552 -5.929 94.719 96.586 1.00 67.07 O
ATOM 2 P A B 553 -5.483 93.718 97.762 1.00 67.26 P
ATOM 3 OP1 A B 553 -6.125 92.409 97.492 1.00 66.40 O
ATOM 4 OP2 A B 553 -5.658 94.369 99.091 1.00 64.76 O
ATOM 5 O5' A B 553 -3.927 93.514 97.489 1.00 67.57 O
ATOM 6 C5' A B 553 -3.481 92.839 96.293 1.00 66.81 C
ATOM 7 C4' A B 553 -1.979 92.938 96.148 1.00 65.40 C
ATOM 8 O4' A B 553 -1.583 94.280 95.763 1.00 64.96 O
ATOM 9 C3' A B 553 -1.165 92.668 97.398 1.00 64.17 C
ATOM 10 O3' A B 553 -1.044 91.278 97.644 1.00 63.05 O
ATOM 11 C2' A B 553 0.166 93.313 97.045 1.00 62.48 C
ATOM 12 O2' A B 553 0.896 92.499 96.148 1.00 60.72 O
ATOM 13 C1' A B 553 -0.301 94.565 96.303 1.00 62.00 C
ATOM 14 N9 A B 553 -0.410 95.767 97.130 1.00 60.57 N
ATOM 15 C8 A B 553 -1.546 96.310 97.672 1.00 59.93 C
ATOM 16 N7 A B 553 -1.340 97.431 98.319 1.00 60.47 N
ATOM 17 C5 A B 553 0.026 97.637 98.206 1.00 59.89 C
ATOM 18 C6 A B 553 0.871 98.668 98.664 1.00 61.42 C
ATOM 19 N6 A B 553 0.445 99.728 99.353 1.00 61.40 N
ATOM 20 N1 A B 553 2.187 98.571 98.385 1.00 61.23 N
ATOM 21 C2 A B 553 2.616 97.508 97.692 1.00 61.38 C
ATOM 22 N3 A B 553 1.923 96.483 97.204 1.00 61.08 N
ATOM 23 C4 A B 553 0.616 96.609 97.495 1.00 61.00 C
ATOM 24 P A B 554 -1.171 90.729 99.146 1.00 62.67 P
ATOM 25 OP1 A B 554 -1.340 89.249 99.050 1.00 60.79 O
ATOM 26 OP2 A B 554 -2.189 91.553 99.851 1.00 61.89 O
ATOM 27 O5' A B 554 0.240 91.057 99.819 1.00 64.87 O
TER
Atoms:
OP1: (-5.955,105.493,104.637)
OP2: (-7.625,103.669,103.916)
C3': (-3.137,102.347,102.081)
C1': (-3.119,100.149,102.946)
C5': (-3.826,103.389,104.314)
O6: (-7.624,96.607,101.246)
O4': (-3.297,101.057,104.024)
C8: (-5.653,100.023,102.889)
C2: (-4.092,96.324,101.182)
C6: (-6.449,96.933,101.421)
C5: (-5.942,98.119,101.989)
C4: (-4.578,98.275,102.098)
P: (-6.367,104.064,104.604)
C4': (-2.957,102.397,103.588)
C2': (-2.623,100.955,101.743)
O2': (-1.217,100.883,101.671)
N1: (-5.430,96.074,101.036)
N2: (-3.265,95.372,100.735)
N3: (-3.602,97.427,101.722)
N7: (-6.608,99.228,102.491)
N9: (-4.397,99.508,102.667)
O5': (-5.207,103.181,103.962)
O3': (-2.356,103.334,101.431)
OP2: (-7.625,103.669,103.916)
C3': (-3.137,102.347,102.081)
C1': (-3.119,100.149,102.946)
C5': (-3.826,103.389,104.314)
O6: (-7.624,96.607,101.246)
O4': (-3.297,101.057,104.024)
C8: (-5.653,100.023,102.889)
C2: (-4.092,96.324,101.182)
C6: (-6.449,96.933,101.421)
C5: (-5.942,98.119,101.989)
C4: (-4.578,98.275,102.098)
P: (-6.367,104.064,104.604)
C4': (-2.957,102.397,103.588)
C2': (-2.623,100.955,101.743)
O2': (-1.217,100.883,101.671)
N1: (-5.430,96.074,101.036)
N2: (-3.265,95.372,100.735)
N3: (-3.602,97.427,101.722)
N7: (-6.608,99.228,102.491)
N9: (-4.397,99.508,102.667)
O5': (-5.207,103.181,103.962)
O3': (-2.356,103.334,101.431)
OP1: (-6.125,92.409,97.492)
OP2: (-5.658,94.369,99.091)
C3': (-1.165,92.668,97.398)
C1': (-0.301,94.565,96.303)
C5': (-3.481,92.839,96.293)
O4': (-1.583,94.280,95.763)
C8: (-1.546,96.310,97.672)
O2': (0.896,92.499,96.148)
C6: (0.871,98.668,98.664)
C5: (0.026,97.637,98.206)
C4: (0.616,96.609,97.495)
P: (-5.483,93.718,97.762)
C4': (-1.979,92.938,96.148)
C2': (0.166,93.313,97.045)
C2: (2.616,97.508,97.692)
N1: (2.187,98.571,98.385)
N3: (1.923,96.483,97.204)
N6: (0.445,99.728,99.353)
N7: (-1.340,97.431,98.319)
N9: (-0.410,95.767,97.130)
O5': (-3.927,93.514,97.489)
O3': (-1.044,91.278,97.644)
OP2: (-5.658,94.369,99.091)
C3': (-1.165,92.668,97.398)
C1': (-0.301,94.565,96.303)
C5': (-3.481,92.839,96.293)
O4': (-1.583,94.280,95.763)
C8: (-1.546,96.310,97.672)
O2': (0.896,92.499,96.148)
C6: (0.871,98.668,98.664)
C5: (0.026,97.637,98.206)
C4: (0.616,96.609,97.495)
P: (-5.483,93.718,97.762)
C4': (-1.979,92.938,96.148)
C2': (0.166,93.313,97.045)
C2: (2.616,97.508,97.692)
N1: (2.187,98.571,98.385)
N3: (1.923,96.483,97.204)
N6: (0.445,99.728,99.353)
N7: (-1.340,97.431,98.319)
N9: (-0.410,95.767,97.130)
O5': (-3.927,93.514,97.489)
O3': (-1.044,91.278,97.644)
Image (generated by PyMOL):