Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02377:02325
Extra
PDB:
ATOM 1 O3' U A2376 56.284 116.652 94.513 1.00 36.24 O
ATOM 2 P C A2377 56.537 116.044 93.046 1.00 36.63 P
ATOM 3 OP1 C A2377 55.783 116.905 92.110 1.00 38.13 O
ATOM 4 OP2 C A2377 56.277 114.592 93.069 1.00 37.10 O
ATOM 5 O5' C A2377 58.095 116.226 92.770 1.00 34.34 O
ATOM 6 C5' C A2377 58.716 117.527 92.763 1.00 33.37 C
ATOM 7 C4' C A2377 60.144 117.411 92.287 1.00 32.98 C
ATOM 8 O4' C A2377 60.759 116.308 92.964 1.00 33.67 O
ATOM 9 C3' C A2377 60.325 117.021 90.825 1.00 33.53 C
ATOM 10 O3' C A2377 60.457 118.209 90.051 1.00 35.02 O
ATOM 11 C2' C A2377 61.640 116.231 90.793 1.00 31.63 C
ATOM 12 O2' C A2377 62.688 116.946 90.177 1.00 31.43 O
ATOM 13 C1' C A2377 61.937 116.002 92.279 1.00 31.50 C
ATOM 14 N1 C A2377 62.376 114.651 92.670 1.00 31.85 N
ATOM 15 C2 C A2377 63.527 114.526 93.448 1.00 31.03 C
ATOM 16 O2 C A2377 64.119 115.548 93.807 1.00 29.52 O
ATOM 17 N3 C A2377 63.967 113.297 93.788 1.00 32.48 N
ATOM 18 C4 C A2377 63.305 112.217 93.378 1.00 32.08 C
ATOM 19 N4 C A2377 63.797 111.022 93.708 1.00 32.16 N
ATOM 20 C5 C A2377 62.115 112.313 92.605 1.00 32.43 C
ATOM 21 C6 C A2377 61.688 113.537 92.276 1.00 31.45 C
ATOM 22 P G A2378 59.487 118.466 88.808 1.00 35.81 P
ATOM 23 OP1 G A2378 58.393 117.459 88.878 1.00 36.21 O
ATOM 24 OP2 G A2378 60.312 118.569 87.581 1.00 36.39 O
ATOM 25 O5' G A2378 58.864 119.890 89.126 1.00 34.02 O
TER
ATOM 1 O3' A B2324 60.422 103.519 92.109 1.00 30.43 O
ATOM 2 P U B2325 60.806 103.322 93.655 1.00 32.27 P
ATOM 3 OP1 U B2325 60.915 101.857 93.884 1.00 34.23 O
ATOM 4 OP2 U B2325 59.879 104.133 94.483 1.00 31.41 O
ATOM 5 O5' U B2325 62.265 103.934 93.794 1.00 32.02 O
ATOM 6 C5' U B2325 63.128 103.533 94.864 1.00 30.05 C
ATOM 7 C4' U B2325 64.158 104.596 95.108 1.00 31.80 C
ATOM 8 O4' U B2325 64.930 104.772 93.888 1.00 31.63 O
ATOM 9 C3' U B2325 63.568 105.961 95.438 1.00 33.44 C
ATOM 10 O3' U B2325 64.434 106.665 96.318 1.00 32.78 O
ATOM 11 C2' U B2325 63.512 106.635 94.073 1.00 32.63 C
ATOM 12 O2' U B2325 63.533 108.043 94.154 1.00 35.78 O
ATOM 13 C1' U B2325 64.781 106.098 93.417 1.00 32.24 C
ATOM 14 N1 U B2325 64.704 106.072 91.947 1.00 32.22 N
ATOM 15 C2 U B2325 65.242 107.148 91.240 1.00 32.17 C
ATOM 16 O2 U B2325 65.810 108.086 91.775 1.00 31.50 O
ATOM 17 N3 U B2325 65.091 107.078 89.879 1.00 31.79 N
ATOM 18 C4 U B2325 64.488 106.068 89.161 1.00 34.33 C
ATOM 19 O4 U B2325 64.347 106.189 87.940 1.00 35.81 O
ATOM 20 C5 U B2325 63.992 104.988 89.957 1.00 34.47 C
ATOM 21 C6 U B2325 64.110 105.027 91.286 1.00 31.60 C
ATOM 22 P A B2326 64.171 106.605 97.901 1.00 33.31 P
ATOM 23 OP1 A B2326 63.931 105.176 98.225 1.00 33.24 O
ATOM 24 OP2 A B2326 63.172 107.619 98.292 1.00 32.72 O
ATOM 25 O5' A B2326 65.566 107.054 98.518 1.00 35.55 O
TER
ATOM 2 P C A2377 56.537 116.044 93.046 1.00 36.63 P
ATOM 3 OP1 C A2377 55.783 116.905 92.110 1.00 38.13 O
ATOM 4 OP2 C A2377 56.277 114.592 93.069 1.00 37.10 O
ATOM 5 O5' C A2377 58.095 116.226 92.770 1.00 34.34 O
ATOM 6 C5' C A2377 58.716 117.527 92.763 1.00 33.37 C
ATOM 7 C4' C A2377 60.144 117.411 92.287 1.00 32.98 C
ATOM 8 O4' C A2377 60.759 116.308 92.964 1.00 33.67 O
ATOM 9 C3' C A2377 60.325 117.021 90.825 1.00 33.53 C
ATOM 10 O3' C A2377 60.457 118.209 90.051 1.00 35.02 O
ATOM 11 C2' C A2377 61.640 116.231 90.793 1.00 31.63 C
ATOM 12 O2' C A2377 62.688 116.946 90.177 1.00 31.43 O
ATOM 13 C1' C A2377 61.937 116.002 92.279 1.00 31.50 C
ATOM 14 N1 C A2377 62.376 114.651 92.670 1.00 31.85 N
ATOM 15 C2 C A2377 63.527 114.526 93.448 1.00 31.03 C
ATOM 16 O2 C A2377 64.119 115.548 93.807 1.00 29.52 O
ATOM 17 N3 C A2377 63.967 113.297 93.788 1.00 32.48 N
ATOM 18 C4 C A2377 63.305 112.217 93.378 1.00 32.08 C
ATOM 19 N4 C A2377 63.797 111.022 93.708 1.00 32.16 N
ATOM 20 C5 C A2377 62.115 112.313 92.605 1.00 32.43 C
ATOM 21 C6 C A2377 61.688 113.537 92.276 1.00 31.45 C
ATOM 22 P G A2378 59.487 118.466 88.808 1.00 35.81 P
ATOM 23 OP1 G A2378 58.393 117.459 88.878 1.00 36.21 O
ATOM 24 OP2 G A2378 60.312 118.569 87.581 1.00 36.39 O
ATOM 25 O5' G A2378 58.864 119.890 89.126 1.00 34.02 O
TER
ATOM 1 O3' A B2324 60.422 103.519 92.109 1.00 30.43 O
ATOM 2 P U B2325 60.806 103.322 93.655 1.00 32.27 P
ATOM 3 OP1 U B2325 60.915 101.857 93.884 1.00 34.23 O
ATOM 4 OP2 U B2325 59.879 104.133 94.483 1.00 31.41 O
ATOM 5 O5' U B2325 62.265 103.934 93.794 1.00 32.02 O
ATOM 6 C5' U B2325 63.128 103.533 94.864 1.00 30.05 C
ATOM 7 C4' U B2325 64.158 104.596 95.108 1.00 31.80 C
ATOM 8 O4' U B2325 64.930 104.772 93.888 1.00 31.63 O
ATOM 9 C3' U B2325 63.568 105.961 95.438 1.00 33.44 C
ATOM 10 O3' U B2325 64.434 106.665 96.318 1.00 32.78 O
ATOM 11 C2' U B2325 63.512 106.635 94.073 1.00 32.63 C
ATOM 12 O2' U B2325 63.533 108.043 94.154 1.00 35.78 O
ATOM 13 C1' U B2325 64.781 106.098 93.417 1.00 32.24 C
ATOM 14 N1 U B2325 64.704 106.072 91.947 1.00 32.22 N
ATOM 15 C2 U B2325 65.242 107.148 91.240 1.00 32.17 C
ATOM 16 O2 U B2325 65.810 108.086 91.775 1.00 31.50 O
ATOM 17 N3 U B2325 65.091 107.078 89.879 1.00 31.79 N
ATOM 18 C4 U B2325 64.488 106.068 89.161 1.00 34.33 C
ATOM 19 O4 U B2325 64.347 106.189 87.940 1.00 35.81 O
ATOM 20 C5 U B2325 63.992 104.988 89.957 1.00 34.47 C
ATOM 21 C6 U B2325 64.110 105.027 91.286 1.00 31.60 C
ATOM 22 P A B2326 64.171 106.605 97.901 1.00 33.31 P
ATOM 23 OP1 A B2326 63.931 105.176 98.225 1.00 33.24 O
ATOM 24 OP2 A B2326 63.172 107.619 98.292 1.00 32.72 O
ATOM 25 O5' A B2326 65.566 107.054 98.518 1.00 35.55 O
TER
Atoms:
C2: (63.527,114.526,93.448)
OP1: (55.783,116.905,92.110)
OP2: (56.277,114.592,93.069)
C4: (63.305,112.217,93.378)
O5': (58.095,116.226,92.770)
C3': (60.325,117.021,90.825)
C1': (61.937,116.002,92.279)
O4': (60.759,116.308,92.964)
C5': (58.716,117.527,92.763)
P: (56.537,116.044,93.046)
O2: (64.119,115.548,93.807)
C4': (60.144,117.411,92.287)
C2': (61.640,116.231,90.793)
O2': (62.688,116.946,90.177)
N1: (62.376,114.651,92.670)
N3: (63.967,113.297,93.788)
N4: (63.797,111.022,93.708)
C6: (61.688,113.537,92.276)
C5: (62.115,112.313,92.605)
O3': (60.457,118.209,90.051)
OP1: (55.783,116.905,92.110)
OP2: (56.277,114.592,93.069)
C4: (63.305,112.217,93.378)
O5': (58.095,116.226,92.770)
C3': (60.325,117.021,90.825)
C1': (61.937,116.002,92.279)
O4': (60.759,116.308,92.964)
C5': (58.716,117.527,92.763)
P: (56.537,116.044,93.046)
O2: (64.119,115.548,93.807)
C4': (60.144,117.411,92.287)
C2': (61.640,116.231,90.793)
O2': (62.688,116.946,90.177)
N1: (62.376,114.651,92.670)
N3: (63.967,113.297,93.788)
N4: (63.797,111.022,93.708)
C6: (61.688,113.537,92.276)
C5: (62.115,112.313,92.605)
O3': (60.457,118.209,90.051)
C4: (64.488,106.068,89.161)
N3: (65.091,107.078,89.879)
OP1: (60.915,101.857,93.884)
OP2: (59.879,104.133,94.483)
C2: (65.242,107.148,91.240)
C1': (64.781,106.098,93.417)
C3': (63.568,105.961,95.438)
O5': (62.265,103.934,93.794)
O4': (64.930,104.772,93.888)
C5': (63.128,103.533,94.864)
P: (60.806,103.322,93.655)
C4': (64.158,104.596,95.108)
C2': (63.512,106.635,94.073)
O2': (63.533,108.043,94.154)
N1: (64.704,106.072,91.947)
O4: (64.347,106.189,87.940)
O2: (65.810,108.086,91.775)
C6: (64.110,105.027,91.286)
C5: (63.992,104.988,89.957)
O3': (64.434,106.665,96.318)
N3: (65.091,107.078,89.879)
OP1: (60.915,101.857,93.884)
OP2: (59.879,104.133,94.483)
C2: (65.242,107.148,91.240)
C1': (64.781,106.098,93.417)
C3': (63.568,105.961,95.438)
O5': (62.265,103.934,93.794)
O4': (64.930,104.772,93.888)
C5': (63.128,103.533,94.864)
P: (60.806,103.322,93.655)
C4': (64.158,104.596,95.108)
C2': (63.512,106.635,94.073)
O2': (63.533,108.043,94.154)
N1: (64.704,106.072,91.947)
O4: (64.347,106.189,87.940)
O2: (65.810,108.086,91.775)
C6: (64.110,105.027,91.286)
C5: (63.992,104.988,89.957)
O3': (64.434,106.665,96.318)
Image (generated by PyMOL):