Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCS:0580:0553
Extra
PDB:
ATOM 1 O3' A A 579 -6.461 103.198 106.439 1.00 69.07 O
ATOM 2 P G A 580 -6.270 103.656 104.909 1.00 69.77 P
ATOM 3 OP1 G A 580 -5.879 105.091 104.938 1.00 67.58 O
ATOM 4 OP2 G A 580 -7.465 103.234 104.130 1.00 68.60 O
ATOM 5 O5' G A 580 -5.055 102.763 104.389 1.00 68.38 O
ATOM 6 C5' G A 580 -3.690 103.143 104.628 1.00 66.76 C
ATOM 7 C4' G A 580 -2.759 102.156 103.972 1.00 66.20 C
ATOM 8 O4' G A 580 -3.054 100.838 104.494 1.00 67.22 O
ATOM 9 C3' G A 580 -2.906 101.995 102.466 1.00 65.37 C
ATOM 10 O3' G A 580 -2.124 102.941 101.762 1.00 65.38 O
ATOM 11 C2' G A 580 -2.339 100.603 102.236 1.00 65.84 C
ATOM 12 O2' G A 580 -0.929 100.580 102.193 1.00 65.77 O
ATOM 13 C1' G A 580 -2.829 99.867 103.485 1.00 67.00 C
ATOM 14 N9 G A 580 -4.083 99.177 103.221 1.00 67.01 N
ATOM 15 C8 G A 580 -5.355 99.634 103.468 1.00 67.46 C
ATOM 16 N7 G A 580 -6.278 98.810 103.059 1.00 67.84 N
ATOM 17 C5 G A 580 -5.572 97.744 102.522 1.00 66.16 C
ATOM 18 C6 G A 580 -6.031 96.560 101.921 1.00 66.05 C
ATOM 19 O6 G A 580 -7.197 96.200 101.728 1.00 68.77 O
ATOM 20 N1 G A 580 -4.977 95.746 101.523 1.00 65.51 N
ATOM 21 C2 G A 580 -3.650 96.034 101.688 1.00 64.77 C
ATOM 22 N2 G A 580 -2.782 95.107 101.252 1.00 63.15 N
ATOM 23 N3 G A 580 -3.207 97.143 102.243 1.00 65.23 N
ATOM 24 C4 G A 580 -4.217 97.948 102.633 1.00 65.90 C
ATOM 25 P A A 581 -2.759 104.349 101.330 1.00 67.21 P
ATOM 26 OP1 A A 581 -2.656 105.239 102.514 1.00 65.24 O
ATOM 27 OP2 A A 581 -4.080 104.128 100.687 1.00 66.66 O
ATOM 28 O5' A A 581 -1.762 104.876 100.207 1.00 67.00 O
TER
ATOM 1 O3' G B 552 -5.831 94.312 97.213 1.00 61.40 O
ATOM 2 P A B 553 -5.316 93.367 98.410 1.00 64.70 P
ATOM 3 OP1 A B 553 -5.896 92.009 98.220 1.00 61.97 O
ATOM 4 OP2 A B 553 -5.498 94.072 99.699 1.00 62.92 O
ATOM 5 O5' A B 553 -3.754 93.234 98.139 1.00 63.85 O
ATOM 6 C5' A B 553 -3.282 92.524 96.977 1.00 63.02 C
ATOM 7 C4' A B 553 -1.788 92.677 96.820 1.00 59.77 C
ATOM 8 O4' A B 553 -1.447 94.022 96.396 1.00 57.84 O
ATOM 9 C3' A B 553 -0.959 92.476 98.071 1.00 58.46 C
ATOM 10 O3' A B 553 -0.808 91.096 98.372 1.00 57.70 O
ATOM 11 C2' A B 553 0.346 93.143 97.668 1.00 57.24 C
ATOM 12 O2' A B 553 1.067 92.340 96.752 1.00 57.83 O
ATOM 13 C1' A B 553 -0.172 94.361 96.902 1.00 55.42 C
ATOM 14 N9 A B 553 -0.307 95.576 97.701 1.00 53.70 N
ATOM 15 C8 A B 553 -1.453 96.114 98.223 1.00 53.17 C
ATOM 16 N7 A B 553 -1.267 97.258 98.839 1.00 54.52 N
ATOM 17 C5 A B 553 0.102 97.478 98.730 1.00 54.08 C
ATOM 18 C6 A B 553 0.939 98.525 99.174 1.00 53.24 C
ATOM 19 N6 A B 553 0.508 99.581 99.855 1.00 53.71 N
ATOM 20 N1 A B 553 2.252 98.441 98.893 1.00 51.74 N
ATOM 21 C2 A B 553 2.693 97.372 98.226 1.00 53.24 C
ATOM 22 N3 A B 553 2.015 96.325 97.764 1.00 53.80 N
ATOM 23 C4 A B 553 0.706 96.441 98.047 1.00 54.02 C
ATOM 24 P A B 554 -0.913 90.602 99.897 1.00 59.57 P
ATOM 25 OP1 A B 554 -1.140 89.131 99.842 1.00 58.64 O
ATOM 26 OP2 A B 554 -1.856 91.483 100.657 1.00 56.18 O
ATOM 27 O5' A B 554 0.541 90.852 100.493 1.00 58.98 O
TER
ATOM 2 P G A 580 -6.270 103.656 104.909 1.00 69.77 P
ATOM 3 OP1 G A 580 -5.879 105.091 104.938 1.00 67.58 O
ATOM 4 OP2 G A 580 -7.465 103.234 104.130 1.00 68.60 O
ATOM 5 O5' G A 580 -5.055 102.763 104.389 1.00 68.38 O
ATOM 6 C5' G A 580 -3.690 103.143 104.628 1.00 66.76 C
ATOM 7 C4' G A 580 -2.759 102.156 103.972 1.00 66.20 C
ATOM 8 O4' G A 580 -3.054 100.838 104.494 1.00 67.22 O
ATOM 9 C3' G A 580 -2.906 101.995 102.466 1.00 65.37 C
ATOM 10 O3' G A 580 -2.124 102.941 101.762 1.00 65.38 O
ATOM 11 C2' G A 580 -2.339 100.603 102.236 1.00 65.84 C
ATOM 12 O2' G A 580 -0.929 100.580 102.193 1.00 65.77 O
ATOM 13 C1' G A 580 -2.829 99.867 103.485 1.00 67.00 C
ATOM 14 N9 G A 580 -4.083 99.177 103.221 1.00 67.01 N
ATOM 15 C8 G A 580 -5.355 99.634 103.468 1.00 67.46 C
ATOM 16 N7 G A 580 -6.278 98.810 103.059 1.00 67.84 N
ATOM 17 C5 G A 580 -5.572 97.744 102.522 1.00 66.16 C
ATOM 18 C6 G A 580 -6.031 96.560 101.921 1.00 66.05 C
ATOM 19 O6 G A 580 -7.197 96.200 101.728 1.00 68.77 O
ATOM 20 N1 G A 580 -4.977 95.746 101.523 1.00 65.51 N
ATOM 21 C2 G A 580 -3.650 96.034 101.688 1.00 64.77 C
ATOM 22 N2 G A 580 -2.782 95.107 101.252 1.00 63.15 N
ATOM 23 N3 G A 580 -3.207 97.143 102.243 1.00 65.23 N
ATOM 24 C4 G A 580 -4.217 97.948 102.633 1.00 65.90 C
ATOM 25 P A A 581 -2.759 104.349 101.330 1.00 67.21 P
ATOM 26 OP1 A A 581 -2.656 105.239 102.514 1.00 65.24 O
ATOM 27 OP2 A A 581 -4.080 104.128 100.687 1.00 66.66 O
ATOM 28 O5' A A 581 -1.762 104.876 100.207 1.00 67.00 O
TER
ATOM 1 O3' G B 552 -5.831 94.312 97.213 1.00 61.40 O
ATOM 2 P A B 553 -5.316 93.367 98.410 1.00 64.70 P
ATOM 3 OP1 A B 553 -5.896 92.009 98.220 1.00 61.97 O
ATOM 4 OP2 A B 553 -5.498 94.072 99.699 1.00 62.92 O
ATOM 5 O5' A B 553 -3.754 93.234 98.139 1.00 63.85 O
ATOM 6 C5' A B 553 -3.282 92.524 96.977 1.00 63.02 C
ATOM 7 C4' A B 553 -1.788 92.677 96.820 1.00 59.77 C
ATOM 8 O4' A B 553 -1.447 94.022 96.396 1.00 57.84 O
ATOM 9 C3' A B 553 -0.959 92.476 98.071 1.00 58.46 C
ATOM 10 O3' A B 553 -0.808 91.096 98.372 1.00 57.70 O
ATOM 11 C2' A B 553 0.346 93.143 97.668 1.00 57.24 C
ATOM 12 O2' A B 553 1.067 92.340 96.752 1.00 57.83 O
ATOM 13 C1' A B 553 -0.172 94.361 96.902 1.00 55.42 C
ATOM 14 N9 A B 553 -0.307 95.576 97.701 1.00 53.70 N
ATOM 15 C8 A B 553 -1.453 96.114 98.223 1.00 53.17 C
ATOM 16 N7 A B 553 -1.267 97.258 98.839 1.00 54.52 N
ATOM 17 C5 A B 553 0.102 97.478 98.730 1.00 54.08 C
ATOM 18 C6 A B 553 0.939 98.525 99.174 1.00 53.24 C
ATOM 19 N6 A B 553 0.508 99.581 99.855 1.00 53.71 N
ATOM 20 N1 A B 553 2.252 98.441 98.893 1.00 51.74 N
ATOM 21 C2 A B 553 2.693 97.372 98.226 1.00 53.24 C
ATOM 22 N3 A B 553 2.015 96.325 97.764 1.00 53.80 N
ATOM 23 C4 A B 553 0.706 96.441 98.047 1.00 54.02 C
ATOM 24 P A B 554 -0.913 90.602 99.897 1.00 59.57 P
ATOM 25 OP1 A B 554 -1.140 89.131 99.842 1.00 58.64 O
ATOM 26 OP2 A B 554 -1.856 91.483 100.657 1.00 56.18 O
ATOM 27 O5' A B 554 0.541 90.852 100.493 1.00 58.98 O
TER
Atoms:
OP1: (-5.879,105.091,104.938)
OP2: (-7.465,103.234,104.130)
C3': (-2.906,101.995,102.466)
C1': (-2.829,99.867,103.485)
C5': (-3.690,103.143,104.628)
O6: (-7.197,96.200,101.728)
O4': (-3.054,100.838,104.494)
C8: (-5.355,99.634,103.468)
C2: (-3.650,96.034,101.688)
C6: (-6.031,96.560,101.921)
C5: (-5.572,97.744,102.522)
C4: (-4.217,97.948,102.633)
P: (-6.270,103.656,104.909)
C4': (-2.759,102.156,103.972)
C2': (-2.339,100.603,102.236)
O2': (-0.929,100.580,102.193)
N1: (-4.977,95.746,101.523)
N2: (-2.782,95.107,101.252)
N3: (-3.207,97.143,102.243)
N7: (-6.278,98.810,103.059)
N9: (-4.083,99.177,103.221)
O5': (-5.055,102.763,104.389)
O3': (-2.124,102.941,101.762)
OP2: (-7.465,103.234,104.130)
C3': (-2.906,101.995,102.466)
C1': (-2.829,99.867,103.485)
C5': (-3.690,103.143,104.628)
O6: (-7.197,96.200,101.728)
O4': (-3.054,100.838,104.494)
C8: (-5.355,99.634,103.468)
C2: (-3.650,96.034,101.688)
C6: (-6.031,96.560,101.921)
C5: (-5.572,97.744,102.522)
C4: (-4.217,97.948,102.633)
P: (-6.270,103.656,104.909)
C4': (-2.759,102.156,103.972)
C2': (-2.339,100.603,102.236)
O2': (-0.929,100.580,102.193)
N1: (-4.977,95.746,101.523)
N2: (-2.782,95.107,101.252)
N3: (-3.207,97.143,102.243)
N7: (-6.278,98.810,103.059)
N9: (-4.083,99.177,103.221)
O5': (-5.055,102.763,104.389)
O3': (-2.124,102.941,101.762)
OP1: (-5.896,92.009,98.220)
OP2: (-5.498,94.072,99.699)
C3': (-0.959,92.476,98.071)
C1': (-0.172,94.361,96.902)
C5': (-3.282,92.524,96.977)
O4': (-1.447,94.022,96.396)
C8: (-1.453,96.114,98.223)
O2': (1.067,92.340,96.752)
C6: (0.939,98.525,99.174)
C5: (0.102,97.478,98.730)
C4: (0.706,96.441,98.047)
P: (-5.316,93.367,98.410)
C4': (-1.788,92.677,96.820)
C2': (0.346,93.143,97.668)
C2: (2.693,97.372,98.226)
N1: (2.252,98.441,98.893)
N3: (2.015,96.325,97.764)
N6: (0.508,99.581,99.855)
N7: (-1.267,97.258,98.839)
N9: (-0.307,95.576,97.701)
O5': (-3.754,93.234,98.139)
O3': (-0.808,91.096,98.372)
OP2: (-5.498,94.072,99.699)
C3': (-0.959,92.476,98.071)
C1': (-0.172,94.361,96.902)
C5': (-3.282,92.524,96.977)
O4': (-1.447,94.022,96.396)
C8: (-1.453,96.114,98.223)
O2': (1.067,92.340,96.752)
C6: (0.939,98.525,99.174)
C5: (0.102,97.478,98.730)
C4: (0.706,96.441,98.047)
P: (-5.316,93.367,98.410)
C4': (-1.788,92.677,96.820)
C2': (0.346,93.143,97.668)
C2: (2.693,97.372,98.226)
N1: (2.252,98.441,98.893)
N3: (2.015,96.325,97.764)
N6: (0.508,99.581,99.855)
N7: (-1.267,97.258,98.839)
N9: (-0.307,95.576,97.701)
O5': (-3.754,93.234,98.139)
O3': (-0.808,91.096,98.372)
Image (generated by PyMOL):