Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01379:01377
Extra
PDB:
ATOM 1 O3' U A1378 63.387 170.605 65.686 1.00 46.18 O
ATOM 2 P C A1379 63.083 172.125 65.263 1.00 50.06 P
ATOM 3 OP1 C A1379 62.988 172.919 66.515 1.00 50.20 O
ATOM 4 OP2 C A1379 61.963 172.159 64.300 1.00 48.80 O
ATOM 5 O5' C A1379 64.405 172.556 64.487 1.00 48.84 O
ATOM 6 C5' C A1379 65.640 172.807 65.195 1.00 47.90 C
ATOM 7 C4' C A1379 66.438 173.847 64.456 1.00 47.98 C
ATOM 8 O4' C A1379 66.829 173.303 63.171 1.00 47.05 O
ATOM 9 C3' C A1379 65.642 175.107 64.142 1.00 47.56 C
ATOM 10 O3' C A1379 65.769 176.062 65.195 1.00 47.62 O
ATOM 11 C2' C A1379 66.267 175.582 62.843 1.00 47.59 C
ATOM 12 O2' C A1379 67.482 176.261 63.066 1.00 48.06 O
ATOM 13 C1' C A1379 66.572 174.250 62.150 1.00 48.67 C
ATOM 14 N1 C A1379 65.507 173.707 61.271 1.00 50.66 N
ATOM 15 C2 C A1379 64.968 174.512 60.240 1.00 50.19 C
ATOM 16 O2 C A1379 65.377 175.671 60.090 1.00 51.74 O
ATOM 17 N3 C A1379 64.014 173.999 59.436 1.00 50.16 N
ATOM 18 C4 C A1379 63.586 172.750 59.618 1.00 50.67 C
ATOM 19 N4 C A1379 62.641 172.293 58.798 1.00 51.16 N
ATOM 20 C5 C A1379 64.107 171.914 60.650 1.00 51.33 C
ATOM 21 C6 C A1379 65.053 172.427 61.445 1.00 51.08 C
ATOM 22 P C A1380 64.478 176.862 65.717 1.00 47.31 P
ATOM 23 OP1 C A1380 64.935 177.677 66.868 1.00 46.61 O
ATOM 24 OP2 C A1380 63.343 175.924 65.896 1.00 47.89 O
ATOM 25 O5' C A1380 64.119 177.834 64.510 1.00 48.18 O
TER
ATOM 1 O3' G B1376 65.335 163.725 58.774 1.00 37.31 O
ATOM 2 P U B1377 63.745 163.680 58.615 1.00 36.90 P
ATOM 3 OP1 U B1377 63.197 162.756 59.642 1.00 38.23 O
ATOM 4 OP2 U B1377 63.435 163.457 57.186 1.00 36.53 O
ATOM 5 O5' U B1377 63.305 165.149 59.005 1.00 36.52 O
ATOM 6 C5' U B1377 63.476 165.635 60.341 1.00 37.40 C
ATOM 7 C4' U B1377 63.553 167.138 60.327 1.00 37.74 C
ATOM 8 O4' U B1377 64.881 167.561 59.913 1.00 38.07 O
ATOM 9 C3' U B1377 62.576 167.800 59.364 1.00 36.94 C
ATOM 10 O3' U B1377 62.128 169.017 59.926 1.00 36.10 O
ATOM 11 C2' U B1377 63.443 168.028 58.129 1.00 37.20 C
ATOM 12 O2' U B1377 62.980 169.056 57.287 1.00 36.70 O
ATOM 13 C1' U B1377 64.774 168.392 58.778 1.00 37.86 C
ATOM 14 N1 U B1377 65.977 168.207 57.956 1.00 38.56 N
ATOM 15 C2 U B1377 66.596 169.345 57.471 1.00 40.50 C
ATOM 16 O2 U B1377 66.141 170.465 57.629 1.00 42.33 O
ATOM 17 N3 U B1377 67.767 169.125 56.788 1.00 40.67 N
ATOM 18 C4 U B1377 68.359 167.909 56.530 1.00 40.14 C
ATOM 19 O4 U B1377 69.464 167.880 55.988 1.00 40.06 O
ATOM 20 C5 U B1377 67.633 166.776 57.022 1.00 40.01 C
ATOM 21 C6 U B1377 66.495 166.959 57.701 1.00 39.28 C
ATOM 22 P U B1378 60.818 169.018 60.849 1.00 40.42 P
ATOM 23 OP1 U B1378 59.938 167.905 60.412 1.00 43.72 O
ATOM 24 OP2 U B1378 60.278 170.402 60.919 1.00 40.51 O
ATOM 25 O5' U B1378 61.353 168.612 62.287 1.00 42.08 O
TER
ATOM 2 P C A1379 63.083 172.125 65.263 1.00 50.06 P
ATOM 3 OP1 C A1379 62.988 172.919 66.515 1.00 50.20 O
ATOM 4 OP2 C A1379 61.963 172.159 64.300 1.00 48.80 O
ATOM 5 O5' C A1379 64.405 172.556 64.487 1.00 48.84 O
ATOM 6 C5' C A1379 65.640 172.807 65.195 1.00 47.90 C
ATOM 7 C4' C A1379 66.438 173.847 64.456 1.00 47.98 C
ATOM 8 O4' C A1379 66.829 173.303 63.171 1.00 47.05 O
ATOM 9 C3' C A1379 65.642 175.107 64.142 1.00 47.56 C
ATOM 10 O3' C A1379 65.769 176.062 65.195 1.00 47.62 O
ATOM 11 C2' C A1379 66.267 175.582 62.843 1.00 47.59 C
ATOM 12 O2' C A1379 67.482 176.261 63.066 1.00 48.06 O
ATOM 13 C1' C A1379 66.572 174.250 62.150 1.00 48.67 C
ATOM 14 N1 C A1379 65.507 173.707 61.271 1.00 50.66 N
ATOM 15 C2 C A1379 64.968 174.512 60.240 1.00 50.19 C
ATOM 16 O2 C A1379 65.377 175.671 60.090 1.00 51.74 O
ATOM 17 N3 C A1379 64.014 173.999 59.436 1.00 50.16 N
ATOM 18 C4 C A1379 63.586 172.750 59.618 1.00 50.67 C
ATOM 19 N4 C A1379 62.641 172.293 58.798 1.00 51.16 N
ATOM 20 C5 C A1379 64.107 171.914 60.650 1.00 51.33 C
ATOM 21 C6 C A1379 65.053 172.427 61.445 1.00 51.08 C
ATOM 22 P C A1380 64.478 176.862 65.717 1.00 47.31 P
ATOM 23 OP1 C A1380 64.935 177.677 66.868 1.00 46.61 O
ATOM 24 OP2 C A1380 63.343 175.924 65.896 1.00 47.89 O
ATOM 25 O5' C A1380 64.119 177.834 64.510 1.00 48.18 O
TER
ATOM 1 O3' G B1376 65.335 163.725 58.774 1.00 37.31 O
ATOM 2 P U B1377 63.745 163.680 58.615 1.00 36.90 P
ATOM 3 OP1 U B1377 63.197 162.756 59.642 1.00 38.23 O
ATOM 4 OP2 U B1377 63.435 163.457 57.186 1.00 36.53 O
ATOM 5 O5' U B1377 63.305 165.149 59.005 1.00 36.52 O
ATOM 6 C5' U B1377 63.476 165.635 60.341 1.00 37.40 C
ATOM 7 C4' U B1377 63.553 167.138 60.327 1.00 37.74 C
ATOM 8 O4' U B1377 64.881 167.561 59.913 1.00 38.07 O
ATOM 9 C3' U B1377 62.576 167.800 59.364 1.00 36.94 C
ATOM 10 O3' U B1377 62.128 169.017 59.926 1.00 36.10 O
ATOM 11 C2' U B1377 63.443 168.028 58.129 1.00 37.20 C
ATOM 12 O2' U B1377 62.980 169.056 57.287 1.00 36.70 O
ATOM 13 C1' U B1377 64.774 168.392 58.778 1.00 37.86 C
ATOM 14 N1 U B1377 65.977 168.207 57.956 1.00 38.56 N
ATOM 15 C2 U B1377 66.596 169.345 57.471 1.00 40.50 C
ATOM 16 O2 U B1377 66.141 170.465 57.629 1.00 42.33 O
ATOM 17 N3 U B1377 67.767 169.125 56.788 1.00 40.67 N
ATOM 18 C4 U B1377 68.359 167.909 56.530 1.00 40.14 C
ATOM 19 O4 U B1377 69.464 167.880 55.988 1.00 40.06 O
ATOM 20 C5 U B1377 67.633 166.776 57.022 1.00 40.01 C
ATOM 21 C6 U B1377 66.495 166.959 57.701 1.00 39.28 C
ATOM 22 P U B1378 60.818 169.018 60.849 1.00 40.42 P
ATOM 23 OP1 U B1378 59.938 167.905 60.412 1.00 43.72 O
ATOM 24 OP2 U B1378 60.278 170.402 60.919 1.00 40.51 O
ATOM 25 O5' U B1378 61.353 168.612 62.287 1.00 42.08 O
TER
Atoms:
C2: (64.968,174.512,60.240)
OP1: (62.988,172.919,66.515)
OP2: (61.963,172.159,64.300)
C4: (63.586,172.750,59.618)
O5': (64.405,172.556,64.487)
C3': (65.642,175.107,64.142)
C1': (66.572,174.250,62.150)
O4': (66.829,173.303,63.171)
C5': (65.640,172.807,65.195)
P: (63.083,172.125,65.263)
O2: (65.377,175.671,60.090)
C4': (66.438,173.847,64.456)
C2': (66.267,175.582,62.843)
O2': (67.482,176.261,63.066)
N1: (65.507,173.707,61.271)
N3: (64.014,173.999,59.436)
N4: (62.641,172.293,58.798)
C6: (65.053,172.427,61.445)
C5: (64.107,171.914,60.650)
O3': (65.769,176.062,65.195)
OP1: (62.988,172.919,66.515)
OP2: (61.963,172.159,64.300)
C4: (63.586,172.750,59.618)
O5': (64.405,172.556,64.487)
C3': (65.642,175.107,64.142)
C1': (66.572,174.250,62.150)
O4': (66.829,173.303,63.171)
C5': (65.640,172.807,65.195)
P: (63.083,172.125,65.263)
O2: (65.377,175.671,60.090)
C4': (66.438,173.847,64.456)
C2': (66.267,175.582,62.843)
O2': (67.482,176.261,63.066)
N1: (65.507,173.707,61.271)
N3: (64.014,173.999,59.436)
N4: (62.641,172.293,58.798)
C6: (65.053,172.427,61.445)
C5: (64.107,171.914,60.650)
O3': (65.769,176.062,65.195)
C4: (68.359,167.909,56.530)
N3: (67.767,169.125,56.788)
OP1: (63.197,162.756,59.642)
OP2: (63.435,163.457,57.186)
C2: (66.596,169.345,57.471)
C1': (64.774,168.392,58.778)
C3': (62.576,167.800,59.364)
O5': (63.305,165.149,59.005)
O4': (64.881,167.561,59.913)
C5': (63.476,165.635,60.341)
P: (63.745,163.680,58.615)
C4': (63.553,167.138,60.327)
C2': (63.443,168.028,58.129)
O2': (62.980,169.056,57.287)
N1: (65.977,168.207,57.956)
O4: (69.464,167.880,55.988)
O2: (66.141,170.465,57.629)
C6: (66.495,166.959,57.701)
C5: (67.633,166.776,57.022)
O3': (62.128,169.017,59.926)
N3: (67.767,169.125,56.788)
OP1: (63.197,162.756,59.642)
OP2: (63.435,163.457,57.186)
C2: (66.596,169.345,57.471)
C1': (64.774,168.392,58.778)
C3': (62.576,167.800,59.364)
O5': (63.305,165.149,59.005)
O4': (64.881,167.561,59.913)
C5': (63.476,165.635,60.341)
P: (63.745,163.680,58.615)
C4': (63.553,167.138,60.327)
C2': (63.443,168.028,58.129)
O2': (62.980,169.056,57.287)
N1: (65.977,168.207,57.956)
O4: (69.464,167.880,55.988)
O2: (66.141,170.465,57.629)
C6: (66.495,166.959,57.701)
C5: (67.633,166.776,57.022)
O3': (62.128,169.017,59.926)
Image (generated by PyMOL):