Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02377:02325
Extra
PDB:
ATOM 1 O3' U A2376 55.946 116.805 94.394 1.00 42.72 O
ATOM 2 P C A2377 56.346 116.260 92.940 1.00 44.95 P
ATOM 3 OP1 C A2377 55.755 117.210 91.965 1.00 45.48 O
ATOM 4 OP2 C A2377 56.005 114.818 92.861 1.00 45.01 O
ATOM 5 O5' C A2377 57.931 116.391 92.862 1.00 42.50 O
ATOM 6 C5' C A2377 58.580 117.674 92.893 1.00 40.98 C
ATOM 7 C4' C A2377 60.001 117.549 92.396 1.00 41.09 C
ATOM 8 O4' C A2377 60.618 116.416 93.025 1.00 41.73 O
ATOM 9 C3' C A2377 60.160 117.206 90.923 1.00 40.18 C
ATOM 10 O3' C A2377 60.237 118.418 90.182 1.00 39.96 O
ATOM 11 C2' C A2377 61.491 116.443 90.846 1.00 39.91 C
ATOM 12 O2' C A2377 62.526 117.220 90.288 1.00 41.64 O
ATOM 13 C1' C A2377 61.795 116.138 92.318 1.00 40.46 C
ATOM 14 N1 C A2377 62.245 114.774 92.656 1.00 39.37 N
ATOM 15 C2 C A2377 63.378 114.622 93.460 1.00 36.92 C
ATOM 16 O2 C A2377 63.961 115.631 93.875 1.00 35.18 O
ATOM 17 N3 C A2377 63.809 113.383 93.765 1.00 36.32 N
ATOM 18 C4 C A2377 63.157 112.317 93.307 1.00 36.76 C
ATOM 19 N4 C A2377 63.633 111.114 93.619 1.00 35.90 N
ATOM 20 C5 C A2377 61.994 112.437 92.501 1.00 38.59 C
ATOM 21 C6 C A2377 61.576 113.672 92.198 1.00 39.73 C
ATOM 22 P G A2378 59.476 118.551 88.781 1.00 40.19 P
ATOM 23 OP1 G A2378 58.471 117.467 88.705 1.00 41.55 O
ATOM 24 OP2 G A2378 60.482 118.695 87.708 1.00 38.86 O
ATOM 25 O5' G A2378 58.668 119.910 88.923 1.00 40.06 O
TER
ATOM 1 O3' A B2324 60.225 103.757 92.215 1.00 38.77 O
ATOM 2 P U B2325 60.709 103.580 93.739 1.00 39.87 P
ATOM 3 OP1 U B2325 60.582 102.137 94.057 1.00 42.11 O
ATOM 4 OP2 U B2325 60.008 104.580 94.587 1.00 37.64 O
ATOM 5 O5' U B2325 62.258 103.938 93.696 1.00 38.13 O
ATOM 6 C5' U B2325 63.134 103.586 94.779 1.00 36.51 C
ATOM 7 C4' U B2325 64.107 104.709 95.041 1.00 36.72 C
ATOM 8 O4' U B2325 64.895 104.938 93.837 1.00 36.73 O
ATOM 9 C3' U B2325 63.458 106.046 95.383 1.00 36.21 C
ATOM 10 O3' U B2325 64.302 106.783 96.261 1.00 35.38 O
ATOM 11 C2' U B2325 63.389 106.729 94.023 1.00 36.35 C
ATOM 12 O2' U B2325 63.331 108.135 94.105 1.00 39.02 O
ATOM 13 C1' U B2325 64.697 106.266 93.382 1.00 36.49 C
ATOM 14 N1 U B2325 64.641 106.267 91.909 1.00 36.11 N
ATOM 15 C2 U B2325 65.111 107.389 91.234 1.00 35.45 C
ATOM 16 O2 U B2325 65.649 108.330 91.789 1.00 34.32 O
ATOM 17 N3 U B2325 64.937 107.362 89.877 1.00 35.71 N
ATOM 18 C4 U B2325 64.379 106.350 89.129 1.00 38.35 C
ATOM 19 O4 U B2325 64.188 106.525 87.921 1.00 39.38 O
ATOM 20 C5 U B2325 63.974 105.205 89.885 1.00 38.38 C
ATOM 21 C6 U B2325 64.113 105.203 91.214 1.00 36.71 C
ATOM 22 P A B2326 63.998 106.801 97.837 1.00 34.01 P
ATOM 23 OP1 A B2326 63.773 105.397 98.252 1.00 32.33 O
ATOM 24 OP2 A B2326 62.963 107.817 98.114 1.00 32.65 O
ATOM 25 O5' A B2326 65.373 107.298 98.466 1.00 33.70 O
TER
ATOM 2 P C A2377 56.346 116.260 92.940 1.00 44.95 P
ATOM 3 OP1 C A2377 55.755 117.210 91.965 1.00 45.48 O
ATOM 4 OP2 C A2377 56.005 114.818 92.861 1.00 45.01 O
ATOM 5 O5' C A2377 57.931 116.391 92.862 1.00 42.50 O
ATOM 6 C5' C A2377 58.580 117.674 92.893 1.00 40.98 C
ATOM 7 C4' C A2377 60.001 117.549 92.396 1.00 41.09 C
ATOM 8 O4' C A2377 60.618 116.416 93.025 1.00 41.73 O
ATOM 9 C3' C A2377 60.160 117.206 90.923 1.00 40.18 C
ATOM 10 O3' C A2377 60.237 118.418 90.182 1.00 39.96 O
ATOM 11 C2' C A2377 61.491 116.443 90.846 1.00 39.91 C
ATOM 12 O2' C A2377 62.526 117.220 90.288 1.00 41.64 O
ATOM 13 C1' C A2377 61.795 116.138 92.318 1.00 40.46 C
ATOM 14 N1 C A2377 62.245 114.774 92.656 1.00 39.37 N
ATOM 15 C2 C A2377 63.378 114.622 93.460 1.00 36.92 C
ATOM 16 O2 C A2377 63.961 115.631 93.875 1.00 35.18 O
ATOM 17 N3 C A2377 63.809 113.383 93.765 1.00 36.32 N
ATOM 18 C4 C A2377 63.157 112.317 93.307 1.00 36.76 C
ATOM 19 N4 C A2377 63.633 111.114 93.619 1.00 35.90 N
ATOM 20 C5 C A2377 61.994 112.437 92.501 1.00 38.59 C
ATOM 21 C6 C A2377 61.576 113.672 92.198 1.00 39.73 C
ATOM 22 P G A2378 59.476 118.551 88.781 1.00 40.19 P
ATOM 23 OP1 G A2378 58.471 117.467 88.705 1.00 41.55 O
ATOM 24 OP2 G A2378 60.482 118.695 87.708 1.00 38.86 O
ATOM 25 O5' G A2378 58.668 119.910 88.923 1.00 40.06 O
TER
ATOM 1 O3' A B2324 60.225 103.757 92.215 1.00 38.77 O
ATOM 2 P U B2325 60.709 103.580 93.739 1.00 39.87 P
ATOM 3 OP1 U B2325 60.582 102.137 94.057 1.00 42.11 O
ATOM 4 OP2 U B2325 60.008 104.580 94.587 1.00 37.64 O
ATOM 5 O5' U B2325 62.258 103.938 93.696 1.00 38.13 O
ATOM 6 C5' U B2325 63.134 103.586 94.779 1.00 36.51 C
ATOM 7 C4' U B2325 64.107 104.709 95.041 1.00 36.72 C
ATOM 8 O4' U B2325 64.895 104.938 93.837 1.00 36.73 O
ATOM 9 C3' U B2325 63.458 106.046 95.383 1.00 36.21 C
ATOM 10 O3' U B2325 64.302 106.783 96.261 1.00 35.38 O
ATOM 11 C2' U B2325 63.389 106.729 94.023 1.00 36.35 C
ATOM 12 O2' U B2325 63.331 108.135 94.105 1.00 39.02 O
ATOM 13 C1' U B2325 64.697 106.266 93.382 1.00 36.49 C
ATOM 14 N1 U B2325 64.641 106.267 91.909 1.00 36.11 N
ATOM 15 C2 U B2325 65.111 107.389 91.234 1.00 35.45 C
ATOM 16 O2 U B2325 65.649 108.330 91.789 1.00 34.32 O
ATOM 17 N3 U B2325 64.937 107.362 89.877 1.00 35.71 N
ATOM 18 C4 U B2325 64.379 106.350 89.129 1.00 38.35 C
ATOM 19 O4 U B2325 64.188 106.525 87.921 1.00 39.38 O
ATOM 20 C5 U B2325 63.974 105.205 89.885 1.00 38.38 C
ATOM 21 C6 U B2325 64.113 105.203 91.214 1.00 36.71 C
ATOM 22 P A B2326 63.998 106.801 97.837 1.00 34.01 P
ATOM 23 OP1 A B2326 63.773 105.397 98.252 1.00 32.33 O
ATOM 24 OP2 A B2326 62.963 107.817 98.114 1.00 32.65 O
ATOM 25 O5' A B2326 65.373 107.298 98.466 1.00 33.70 O
TER
Atoms:
C2: (63.378,114.622,93.460)
OP1: (55.755,117.210,91.965)
OP2: (56.005,114.818,92.861)
C4: (63.157,112.317,93.307)
O5': (57.931,116.391,92.862)
C3': (60.160,117.206,90.923)
C1': (61.795,116.138,92.318)
O4': (60.618,116.416,93.025)
C5': (58.580,117.674,92.893)
P: (56.346,116.260,92.940)
O2: (63.961,115.631,93.875)
C4': (60.001,117.549,92.396)
C2': (61.491,116.443,90.846)
O2': (62.526,117.220,90.288)
N1: (62.245,114.774,92.656)
N3: (63.809,113.383,93.765)
N4: (63.633,111.114,93.619)
C6: (61.576,113.672,92.198)
C5: (61.994,112.437,92.501)
O3': (60.237,118.418,90.182)
OP1: (55.755,117.210,91.965)
OP2: (56.005,114.818,92.861)
C4: (63.157,112.317,93.307)
O5': (57.931,116.391,92.862)
C3': (60.160,117.206,90.923)
C1': (61.795,116.138,92.318)
O4': (60.618,116.416,93.025)
C5': (58.580,117.674,92.893)
P: (56.346,116.260,92.940)
O2: (63.961,115.631,93.875)
C4': (60.001,117.549,92.396)
C2': (61.491,116.443,90.846)
O2': (62.526,117.220,90.288)
N1: (62.245,114.774,92.656)
N3: (63.809,113.383,93.765)
N4: (63.633,111.114,93.619)
C6: (61.576,113.672,92.198)
C5: (61.994,112.437,92.501)
O3': (60.237,118.418,90.182)
C4: (64.379,106.350,89.129)
N3: (64.937,107.362,89.877)
OP1: (60.582,102.137,94.057)
OP2: (60.008,104.580,94.587)
C2: (65.111,107.389,91.234)
C1': (64.697,106.266,93.382)
C3': (63.458,106.046,95.383)
O5': (62.258,103.938,93.696)
O4': (64.895,104.938,93.837)
C5': (63.134,103.586,94.779)
P: (60.709,103.580,93.739)
C4': (64.107,104.709,95.041)
C2': (63.389,106.729,94.023)
O2': (63.331,108.135,94.105)
N1: (64.641,106.267,91.909)
O4: (64.188,106.525,87.921)
O2: (65.649,108.330,91.789)
C6: (64.113,105.203,91.214)
C5: (63.974,105.205,89.885)
O3': (64.302,106.783,96.261)
N3: (64.937,107.362,89.877)
OP1: (60.582,102.137,94.057)
OP2: (60.008,104.580,94.587)
C2: (65.111,107.389,91.234)
C1': (64.697,106.266,93.382)
C3': (63.458,106.046,95.383)
O5': (62.258,103.938,93.696)
O4': (64.895,104.938,93.837)
C5': (63.134,103.586,94.779)
P: (60.709,103.580,93.739)
C4': (64.107,104.709,95.041)
C2': (63.389,106.729,94.023)
O2': (63.331,108.135,94.105)
N1: (64.641,106.267,91.909)
O4: (64.188,106.525,87.921)
O2: (65.649,108.330,91.789)
C6: (64.113,105.203,91.214)
C5: (63.974,105.205,89.885)
O3': (64.302,106.783,96.261)
Image (generated by PyMOL):