Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0494:0497
Extra
PDB:
ATOM 1 O3' C A 493 13.441 161.389 53.398 1.00 44.63 O
ATOM 2 P G A 494 12.165 160.418 53.430 1.00 42.71 P
ATOM 3 OP1 G A 494 11.565 160.441 52.080 1.00 43.00 O
ATOM 4 OP2 G A 494 11.335 160.758 54.612 1.00 41.83 O
ATOM 5 O5' G A 494 12.791 158.975 53.652 1.00 43.84 O
ATOM 6 C5' G A 494 13.608 158.362 52.641 1.00 44.42 C
ATOM 7 C4' G A 494 14.229 157.102 53.181 1.00 45.11 C
ATOM 8 O4' G A 494 15.158 157.448 54.240 1.00 46.46 O
ATOM 9 C3' G A 494 13.251 156.152 53.844 1.00 45.45 C
ATOM 10 O3' G A 494 12.601 155.337 52.891 1.00 48.03 O
ATOM 11 C2' G A 494 14.155 155.374 54.783 1.00 45.56 C
ATOM 12 O2' G A 494 14.935 154.411 54.103 1.00 46.28 O
ATOM 13 C1' G A 494 15.068 156.494 55.285 1.00 45.80 C
ATOM 14 N9 G A 494 14.493 157.153 56.455 1.00 45.14 N
ATOM 15 C8 G A 494 13.619 158.213 56.469 1.00 44.29 C
ATOM 16 N7 G A 494 13.217 158.528 57.669 1.00 44.71 N
ATOM 17 C5 G A 494 13.876 157.631 58.496 1.00 44.04 C
ATOM 18 C6 G A 494 13.820 157.469 59.897 1.00 43.45 C
ATOM 19 O6 G A 494 13.138 158.091 60.717 1.00 44.48 O
ATOM 20 N1 G A 494 14.662 156.452 60.325 1.00 42.78 N
ATOM 21 C2 G A 494 15.450 155.685 59.508 1.00 43.37 C
ATOM 22 N2 G A 494 16.206 154.764 60.104 1.00 43.70 N
ATOM 23 N3 G A 494 15.496 155.814 58.200 1.00 43.69 N
ATOM 24 C4 G A 494 14.689 156.797 57.764 1.00 44.12 C
ATOM 25 P A A 495 11.021 155.082 53.012 1.00 50.94 P
ATOM 26 OP1 A A 495 10.587 154.452 51.733 1.00 52.21 O
ATOM 27 OP2 A A 495 10.374 156.344 53.468 1.00 50.36 O
ATOM 28 O5' A A 495 10.900 154.004 54.179 1.00 49.54 O
TER
ATOM 1 O3' A B 496 14.311 152.447 62.537 1.00 44.51 O
ATOM 2 P A B 497 14.331 153.873 63.268 1.00 46.75 P
ATOM 3 OP1 A B 497 13.552 153.704 64.518 1.00 46.90 O
ATOM 4 OP2 A B 497 13.956 154.939 62.304 1.00 44.49 O
ATOM 5 O5' A B 497 15.849 154.060 63.695 1.00 45.17 O
ATOM 6 C5' A B 497 16.857 154.194 62.707 1.00 45.63 C
ATOM 7 C4' A B 497 18.215 154.051 63.327 1.00 46.20 C
ATOM 8 O4' A B 497 19.208 154.232 62.293 1.00 46.64 O
ATOM 9 C3' A B 497 18.569 155.063 64.403 1.00 46.90 C
ATOM 10 O3' A B 497 19.509 154.504 65.301 1.00 50.94 O
ATOM 11 C2' A B 497 19.163 156.219 63.610 1.00 45.83 C
ATOM 12 O2' A B 497 20.157 156.913 64.331 1.00 45.11 O
ATOM 13 C1' A B 497 19.774 155.520 62.395 1.00 45.36 C
ATOM 14 N9 A B 497 19.498 156.235 61.147 1.00 44.16 N
ATOM 15 C8 A B 497 18.446 157.069 60.849 1.00 43.79 C
ATOM 16 N7 A B 497 18.524 157.616 59.663 1.00 44.42 N
ATOM 17 C5 A B 497 19.697 157.096 59.135 1.00 44.97 C
ATOM 18 C6 A B 497 20.356 157.291 57.905 1.00 44.89 C
ATOM 19 N6 A B 497 19.922 158.105 56.942 1.00 44.48 N
ATOM 20 N1 A B 497 21.500 156.611 57.695 1.00 44.98 N
ATOM 21 C2 A B 497 21.947 155.797 58.655 1.00 44.68 C
ATOM 22 N3 A B 497 21.426 155.535 59.848 1.00 44.39 N
ATOM 23 C4 A B 497 20.292 156.226 60.030 1.00 44.42 C
ATOM 24 P U B 498 19.304 154.691 66.882 1.00 54.29 P
ATOM 25 OP1 U B 498 17.844 154.655 67.171 1.00 53.07 O
ATOM 26 OP2 U B 498 20.106 155.853 67.319 1.00 54.13 O
ATOM 27 O5' U B 498 19.966 153.382 67.499 1.00 58.37 O
TER
ATOM 2 P G A 494 12.165 160.418 53.430 1.00 42.71 P
ATOM 3 OP1 G A 494 11.565 160.441 52.080 1.00 43.00 O
ATOM 4 OP2 G A 494 11.335 160.758 54.612 1.00 41.83 O
ATOM 5 O5' G A 494 12.791 158.975 53.652 1.00 43.84 O
ATOM 6 C5' G A 494 13.608 158.362 52.641 1.00 44.42 C
ATOM 7 C4' G A 494 14.229 157.102 53.181 1.00 45.11 C
ATOM 8 O4' G A 494 15.158 157.448 54.240 1.00 46.46 O
ATOM 9 C3' G A 494 13.251 156.152 53.844 1.00 45.45 C
ATOM 10 O3' G A 494 12.601 155.337 52.891 1.00 48.03 O
ATOM 11 C2' G A 494 14.155 155.374 54.783 1.00 45.56 C
ATOM 12 O2' G A 494 14.935 154.411 54.103 1.00 46.28 O
ATOM 13 C1' G A 494 15.068 156.494 55.285 1.00 45.80 C
ATOM 14 N9 G A 494 14.493 157.153 56.455 1.00 45.14 N
ATOM 15 C8 G A 494 13.619 158.213 56.469 1.00 44.29 C
ATOM 16 N7 G A 494 13.217 158.528 57.669 1.00 44.71 N
ATOM 17 C5 G A 494 13.876 157.631 58.496 1.00 44.04 C
ATOM 18 C6 G A 494 13.820 157.469 59.897 1.00 43.45 C
ATOM 19 O6 G A 494 13.138 158.091 60.717 1.00 44.48 O
ATOM 20 N1 G A 494 14.662 156.452 60.325 1.00 42.78 N
ATOM 21 C2 G A 494 15.450 155.685 59.508 1.00 43.37 C
ATOM 22 N2 G A 494 16.206 154.764 60.104 1.00 43.70 N
ATOM 23 N3 G A 494 15.496 155.814 58.200 1.00 43.69 N
ATOM 24 C4 G A 494 14.689 156.797 57.764 1.00 44.12 C
ATOM 25 P A A 495 11.021 155.082 53.012 1.00 50.94 P
ATOM 26 OP1 A A 495 10.587 154.452 51.733 1.00 52.21 O
ATOM 27 OP2 A A 495 10.374 156.344 53.468 1.00 50.36 O
ATOM 28 O5' A A 495 10.900 154.004 54.179 1.00 49.54 O
TER
ATOM 1 O3' A B 496 14.311 152.447 62.537 1.00 44.51 O
ATOM 2 P A B 497 14.331 153.873 63.268 1.00 46.75 P
ATOM 3 OP1 A B 497 13.552 153.704 64.518 1.00 46.90 O
ATOM 4 OP2 A B 497 13.956 154.939 62.304 1.00 44.49 O
ATOM 5 O5' A B 497 15.849 154.060 63.695 1.00 45.17 O
ATOM 6 C5' A B 497 16.857 154.194 62.707 1.00 45.63 C
ATOM 7 C4' A B 497 18.215 154.051 63.327 1.00 46.20 C
ATOM 8 O4' A B 497 19.208 154.232 62.293 1.00 46.64 O
ATOM 9 C3' A B 497 18.569 155.063 64.403 1.00 46.90 C
ATOM 10 O3' A B 497 19.509 154.504 65.301 1.00 50.94 O
ATOM 11 C2' A B 497 19.163 156.219 63.610 1.00 45.83 C
ATOM 12 O2' A B 497 20.157 156.913 64.331 1.00 45.11 O
ATOM 13 C1' A B 497 19.774 155.520 62.395 1.00 45.36 C
ATOM 14 N9 A B 497 19.498 156.235 61.147 1.00 44.16 N
ATOM 15 C8 A B 497 18.446 157.069 60.849 1.00 43.79 C
ATOM 16 N7 A B 497 18.524 157.616 59.663 1.00 44.42 N
ATOM 17 C5 A B 497 19.697 157.096 59.135 1.00 44.97 C
ATOM 18 C6 A B 497 20.356 157.291 57.905 1.00 44.89 C
ATOM 19 N6 A B 497 19.922 158.105 56.942 1.00 44.48 N
ATOM 20 N1 A B 497 21.500 156.611 57.695 1.00 44.98 N
ATOM 21 C2 A B 497 21.947 155.797 58.655 1.00 44.68 C
ATOM 22 N3 A B 497 21.426 155.535 59.848 1.00 44.39 N
ATOM 23 C4 A B 497 20.292 156.226 60.030 1.00 44.42 C
ATOM 24 P U B 498 19.304 154.691 66.882 1.00 54.29 P
ATOM 25 OP1 U B 498 17.844 154.655 67.171 1.00 53.07 O
ATOM 26 OP2 U B 498 20.106 155.853 67.319 1.00 54.13 O
ATOM 27 O5' U B 498 19.966 153.382 67.499 1.00 58.37 O
TER
Atoms:
OP1: (11.565,160.441,52.080)
OP2: (11.335,160.758,54.612)
C3': (13.251,156.152,53.844)
C1': (15.068,156.494,55.285)
C5': (13.608,158.362,52.641)
O6: (13.138,158.091,60.717)
O4': (15.158,157.448,54.240)
C8: (13.619,158.213,56.469)
C2: (15.450,155.685,59.508)
C6: (13.820,157.469,59.897)
C5: (13.876,157.631,58.496)
C4: (14.689,156.797,57.764)
P: (12.165,160.418,53.430)
C4': (14.229,157.102,53.181)
C2': (14.155,155.374,54.783)
O2': (14.935,154.411,54.103)
N1: (14.662,156.452,60.325)
N2: (16.206,154.764,60.104)
N3: (15.496,155.814,58.200)
N7: (13.217,158.528,57.669)
N9: (14.493,157.153,56.455)
O5': (12.791,158.975,53.652)
O3': (12.601,155.337,52.891)
OP2: (11.335,160.758,54.612)
C3': (13.251,156.152,53.844)
C1': (15.068,156.494,55.285)
C5': (13.608,158.362,52.641)
O6: (13.138,158.091,60.717)
O4': (15.158,157.448,54.240)
C8: (13.619,158.213,56.469)
C2: (15.450,155.685,59.508)
C6: (13.820,157.469,59.897)
C5: (13.876,157.631,58.496)
C4: (14.689,156.797,57.764)
P: (12.165,160.418,53.430)
C4': (14.229,157.102,53.181)
C2': (14.155,155.374,54.783)
O2': (14.935,154.411,54.103)
N1: (14.662,156.452,60.325)
N2: (16.206,154.764,60.104)
N3: (15.496,155.814,58.200)
N7: (13.217,158.528,57.669)
N9: (14.493,157.153,56.455)
O5': (12.791,158.975,53.652)
O3': (12.601,155.337,52.891)
OP1: (13.552,153.704,64.518)
OP2: (13.956,154.939,62.304)
C3': (18.569,155.063,64.403)
C1': (19.774,155.520,62.395)
C5': (16.857,154.194,62.707)
O4': (19.208,154.232,62.293)
C8: (18.446,157.069,60.849)
O2': (20.157,156.913,64.331)
C6: (20.356,157.291,57.905)
C5: (19.697,157.096,59.135)
C4: (20.292,156.226,60.030)
P: (14.331,153.873,63.268)
C4': (18.215,154.051,63.327)
C2': (19.163,156.219,63.610)
C2: (21.947,155.797,58.655)
N1: (21.500,156.611,57.695)
N3: (21.426,155.535,59.848)
N6: (19.922,158.105,56.942)
N7: (18.524,157.616,59.663)
N9: (19.498,156.235,61.147)
O5': (15.849,154.060,63.695)
O3': (19.509,154.504,65.301)
OP2: (13.956,154.939,62.304)
C3': (18.569,155.063,64.403)
C1': (19.774,155.520,62.395)
C5': (16.857,154.194,62.707)
O4': (19.208,154.232,62.293)
C8: (18.446,157.069,60.849)
O2': (20.157,156.913,64.331)
C6: (20.356,157.291,57.905)
C5: (19.697,157.096,59.135)
C4: (20.292,156.226,60.030)
P: (14.331,153.873,63.268)
C4': (18.215,154.051,63.327)
C2': (19.163,156.219,63.610)
C2: (21.947,155.797,58.655)
N1: (21.500,156.611,57.695)
N3: (21.426,155.535,59.848)
N6: (19.922,158.105,56.942)
N7: (18.524,157.616,59.663)
N9: (19.498,156.235,61.147)
O5': (15.849,154.060,63.695)
O3': (19.509,154.504,65.301)
Image (generated by PyMOL):