Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:02377:02325
Extra
PDB:
ATOM 1 O3' U A2376 55.905 116.519 94.236 1.00 36.08 O
ATOM 2 P C A2377 56.236 115.829 92.819 1.00 35.27 P
ATOM 3 OP1 C A2377 55.586 116.667 91.784 1.00 36.13 O
ATOM 4 OP2 C A2377 55.899 114.390 92.913 1.00 36.60 O
ATOM 5 O5' C A2377 57.815 115.954 92.641 1.00 31.89 O
ATOM 6 C5' C A2377 58.483 117.220 92.730 1.00 28.75 C
ATOM 7 C4' C A2377 59.909 117.084 92.255 1.00 29.62 C
ATOM 8 O4' C A2377 60.534 115.957 92.888 1.00 28.83 O
ATOM 9 C3' C A2377 60.109 116.792 90.770 1.00 30.37 C
ATOM 10 O3' C A2377 60.306 118.014 90.054 1.00 31.80 O
ATOM 11 C2' C A2377 61.352 115.885 90.716 1.00 29.53 C
ATOM 12 O2' C A2377 62.425 116.465 90.009 1.00 30.09 O
ATOM 13 C1' C A2377 61.723 115.712 92.192 1.00 29.58 C
ATOM 14 N1 C A2377 62.231 114.380 92.576 1.00 30.36 N
ATOM 15 C2 C A2377 63.384 114.301 93.360 1.00 30.50 C
ATOM 16 O2 C A2377 63.957 115.347 93.694 1.00 31.29 O
ATOM 17 N3 C A2377 63.850 113.088 93.732 1.00 29.71 N
ATOM 18 C4 C A2377 63.218 111.984 93.346 1.00 28.70 C
ATOM 19 N4 C A2377 63.714 110.814 93.737 1.00 29.47 N
ATOM 20 C5 C A2377 62.050 112.031 92.543 1.00 30.44 C
ATOM 21 C6 C A2377 61.593 113.238 92.182 1.00 30.94 C
ATOM 22 P G A2378 59.364 118.378 88.801 1.00 32.11 P
ATOM 23 OP1 G A2378 58.207 117.452 88.788 1.00 30.95 O
ATOM 24 OP2 G A2378 60.205 118.514 87.589 1.00 32.76 O
ATOM 25 O5' G A2378 58.805 119.811 89.189 1.00 31.92 O
TER
ATOM 1 O3' A B2324 60.092 103.493 92.201 1.00 30.69 O
ATOM 2 P U B2325 60.578 103.326 93.720 1.00 30.70 P
ATOM 3 OP1 U B2325 60.419 101.891 94.055 1.00 33.10 O
ATOM 4 OP2 U B2325 59.894 104.345 94.546 1.00 32.48 O
ATOM 5 O5' U B2325 62.126 103.682 93.668 1.00 31.79 O
ATOM 6 C5' U B2325 63.015 103.271 94.721 1.00 31.37 C
ATOM 7 C4' U B2325 64.028 104.353 94.992 1.00 31.61 C
ATOM 8 O4' U B2325 64.814 104.580 93.787 1.00 31.19 O
ATOM 9 C3' U B2325 63.419 105.698 95.361 1.00 31.88 C
ATOM 10 O3' U B2325 64.291 106.378 96.248 1.00 32.96 O
ATOM 11 C2' U B2325 63.362 106.419 94.017 1.00 31.48 C
ATOM 12 O2' U B2325 63.384 107.825 94.156 1.00 33.62 O
ATOM 13 C1' U B2325 64.637 105.914 93.343 1.00 30.60 C
ATOM 14 N1 U B2325 64.560 105.916 91.871 1.00 29.06 N
ATOM 15 C2 U B2325 65.086 107.005 91.185 1.00 28.69 C
ATOM 16 O2 U B2325 65.644 107.936 91.735 1.00 27.28 O
ATOM 17 N3 U B2325 64.940 106.956 89.823 1.00 28.59 N
ATOM 18 C4 U B2325 64.349 105.954 89.087 1.00 31.45 C
ATOM 19 O4 U B2325 64.228 106.083 87.864 1.00 32.49 O
ATOM 20 C5 U B2325 63.862 104.859 89.863 1.00 31.31 C
ATOM 21 C6 U B2325 63.978 104.878 91.192 1.00 29.23 C
ATOM 22 P A B2326 63.933 106.461 97.809 1.00 32.93 P
ATOM 23 OP1 A B2326 63.651 105.064 98.234 1.00 32.61 O
ATOM 24 OP2 A B2326 62.914 107.508 98.039 1.00 30.87 O
ATOM 25 O5' A B2326 65.305 106.956 98.450 1.00 33.28 O
TER
ATOM 2 P C A2377 56.236 115.829 92.819 1.00 35.27 P
ATOM 3 OP1 C A2377 55.586 116.667 91.784 1.00 36.13 O
ATOM 4 OP2 C A2377 55.899 114.390 92.913 1.00 36.60 O
ATOM 5 O5' C A2377 57.815 115.954 92.641 1.00 31.89 O
ATOM 6 C5' C A2377 58.483 117.220 92.730 1.00 28.75 C
ATOM 7 C4' C A2377 59.909 117.084 92.255 1.00 29.62 C
ATOM 8 O4' C A2377 60.534 115.957 92.888 1.00 28.83 O
ATOM 9 C3' C A2377 60.109 116.792 90.770 1.00 30.37 C
ATOM 10 O3' C A2377 60.306 118.014 90.054 1.00 31.80 O
ATOM 11 C2' C A2377 61.352 115.885 90.716 1.00 29.53 C
ATOM 12 O2' C A2377 62.425 116.465 90.009 1.00 30.09 O
ATOM 13 C1' C A2377 61.723 115.712 92.192 1.00 29.58 C
ATOM 14 N1 C A2377 62.231 114.380 92.576 1.00 30.36 N
ATOM 15 C2 C A2377 63.384 114.301 93.360 1.00 30.50 C
ATOM 16 O2 C A2377 63.957 115.347 93.694 1.00 31.29 O
ATOM 17 N3 C A2377 63.850 113.088 93.732 1.00 29.71 N
ATOM 18 C4 C A2377 63.218 111.984 93.346 1.00 28.70 C
ATOM 19 N4 C A2377 63.714 110.814 93.737 1.00 29.47 N
ATOM 20 C5 C A2377 62.050 112.031 92.543 1.00 30.44 C
ATOM 21 C6 C A2377 61.593 113.238 92.182 1.00 30.94 C
ATOM 22 P G A2378 59.364 118.378 88.801 1.00 32.11 P
ATOM 23 OP1 G A2378 58.207 117.452 88.788 1.00 30.95 O
ATOM 24 OP2 G A2378 60.205 118.514 87.589 1.00 32.76 O
ATOM 25 O5' G A2378 58.805 119.811 89.189 1.00 31.92 O
TER
ATOM 1 O3' A B2324 60.092 103.493 92.201 1.00 30.69 O
ATOM 2 P U B2325 60.578 103.326 93.720 1.00 30.70 P
ATOM 3 OP1 U B2325 60.419 101.891 94.055 1.00 33.10 O
ATOM 4 OP2 U B2325 59.894 104.345 94.546 1.00 32.48 O
ATOM 5 O5' U B2325 62.126 103.682 93.668 1.00 31.79 O
ATOM 6 C5' U B2325 63.015 103.271 94.721 1.00 31.37 C
ATOM 7 C4' U B2325 64.028 104.353 94.992 1.00 31.61 C
ATOM 8 O4' U B2325 64.814 104.580 93.787 1.00 31.19 O
ATOM 9 C3' U B2325 63.419 105.698 95.361 1.00 31.88 C
ATOM 10 O3' U B2325 64.291 106.378 96.248 1.00 32.96 O
ATOM 11 C2' U B2325 63.362 106.419 94.017 1.00 31.48 C
ATOM 12 O2' U B2325 63.384 107.825 94.156 1.00 33.62 O
ATOM 13 C1' U B2325 64.637 105.914 93.343 1.00 30.60 C
ATOM 14 N1 U B2325 64.560 105.916 91.871 1.00 29.06 N
ATOM 15 C2 U B2325 65.086 107.005 91.185 1.00 28.69 C
ATOM 16 O2 U B2325 65.644 107.936 91.735 1.00 27.28 O
ATOM 17 N3 U B2325 64.940 106.956 89.823 1.00 28.59 N
ATOM 18 C4 U B2325 64.349 105.954 89.087 1.00 31.45 C
ATOM 19 O4 U B2325 64.228 106.083 87.864 1.00 32.49 O
ATOM 20 C5 U B2325 63.862 104.859 89.863 1.00 31.31 C
ATOM 21 C6 U B2325 63.978 104.878 91.192 1.00 29.23 C
ATOM 22 P A B2326 63.933 106.461 97.809 1.00 32.93 P
ATOM 23 OP1 A B2326 63.651 105.064 98.234 1.00 32.61 O
ATOM 24 OP2 A B2326 62.914 107.508 98.039 1.00 30.87 O
ATOM 25 O5' A B2326 65.305 106.956 98.450 1.00 33.28 O
TER
Atoms:
C2: (63.384,114.301,93.360)
OP1: (55.586,116.667,91.784)
OP2: (55.899,114.390,92.913)
C4: (63.218,111.984,93.346)
O5': (57.815,115.954,92.641)
C3': (60.109,116.792,90.770)
C1': (61.723,115.712,92.192)
O4': (60.534,115.957,92.888)
C5': (58.483,117.220,92.730)
P: (56.236,115.829,92.819)
O2: (63.957,115.347,93.694)
C4': (59.909,117.084,92.255)
C2': (61.352,115.885,90.716)
O2': (62.425,116.465,90.009)
N1: (62.231,114.380,92.576)
N3: (63.850,113.088,93.732)
N4: (63.714,110.814,93.737)
C6: (61.593,113.238,92.182)
C5: (62.050,112.031,92.543)
O3': (60.306,118.014,90.054)
OP1: (55.586,116.667,91.784)
OP2: (55.899,114.390,92.913)
C4: (63.218,111.984,93.346)
O5': (57.815,115.954,92.641)
C3': (60.109,116.792,90.770)
C1': (61.723,115.712,92.192)
O4': (60.534,115.957,92.888)
C5': (58.483,117.220,92.730)
P: (56.236,115.829,92.819)
O2: (63.957,115.347,93.694)
C4': (59.909,117.084,92.255)
C2': (61.352,115.885,90.716)
O2': (62.425,116.465,90.009)
N1: (62.231,114.380,92.576)
N3: (63.850,113.088,93.732)
N4: (63.714,110.814,93.737)
C6: (61.593,113.238,92.182)
C5: (62.050,112.031,92.543)
O3': (60.306,118.014,90.054)
C4: (64.349,105.954,89.087)
N3: (64.940,106.956,89.823)
OP1: (60.419,101.891,94.055)
OP2: (59.894,104.345,94.546)
C2: (65.086,107.005,91.185)
C1': (64.637,105.914,93.343)
C3': (63.419,105.698,95.361)
O5': (62.126,103.682,93.668)
O4': (64.814,104.580,93.787)
C5': (63.015,103.271,94.721)
P: (60.578,103.326,93.720)
C4': (64.028,104.353,94.992)
C2': (63.362,106.419,94.017)
O2': (63.384,107.825,94.156)
N1: (64.560,105.916,91.871)
O4: (64.228,106.083,87.864)
O2: (65.644,107.936,91.735)
C6: (63.978,104.878,91.192)
C5: (63.862,104.859,89.863)
O3': (64.291,106.378,96.248)
N3: (64.940,106.956,89.823)
OP1: (60.419,101.891,94.055)
OP2: (59.894,104.345,94.546)
C2: (65.086,107.005,91.185)
C1': (64.637,105.914,93.343)
C3': (63.419,105.698,95.361)
O5': (62.126,103.682,93.668)
O4': (64.814,104.580,93.787)
C5': (63.015,103.271,94.721)
P: (60.578,103.326,93.720)
C4': (64.028,104.353,94.992)
C2': (63.362,106.419,94.017)
O2': (63.384,107.825,94.156)
N1: (64.560,105.916,91.871)
O4: (64.228,106.083,87.864)
O2: (65.644,107.936,91.735)
C6: (63.978,104.878,91.192)
C5: (63.862,104.859,89.863)
O3': (64.291,106.378,96.248)
Image (generated by PyMOL):