Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXE:A61:A39
Extra
PDB:
ATOM 1 O3' U A 60 -22.104 -48.696 2.080 1.00 89.58 O
ATOM 2 P G A 61 -20.614 -48.810 2.662 1.00 87.39 P
ATOM 3 OP1 G A 61 -19.710 -48.250 1.632 1.00 87.69 O
ATOM 4 OP2 G A 61 -20.414 -50.183 3.198 1.00 86.96 O
ATOM 5 O5' G A 61 -20.625 -47.813 3.914 1.00 84.24 O
ATOM 6 C5' G A 61 -21.033 -46.449 3.793 1.00 81.56 C
ATOM 7 C4' G A 61 -21.470 -45.909 5.142 1.00 78.29 C
ATOM 8 O4' G A 61 -22.624 -46.640 5.640 1.00 77.66 O
ATOM 9 C3' G A 61 -20.483 -46.114 6.281 1.00 76.27 C
ATOM 10 O3' G A 61 -19.340 -45.282 6.205 1.00 74.65 O
ATOM 11 C2' G A 61 -21.393 -45.850 7.476 1.00 75.17 C
ATOM 12 O2' G A 61 -21.844 -44.510 7.575 1.00 74.95 O
ATOM 13 C1' G A 61 -22.534 -46.766 7.053 1.00 75.53 C
ATOM 14 N9 G A 61 -22.290 -48.158 7.441 1.00 74.57 N
ATOM 15 C8 G A 61 -21.694 -49.153 6.699 1.00 75.54 C
ATOM 16 N7 G A 61 -21.608 -50.294 7.325 1.00 75.48 N
ATOM 17 C5 G A 61 -22.181 -50.045 8.567 1.00 73.83 C
ATOM 18 C6 G A 61 -22.377 -50.903 9.681 1.00 73.04 C
ATOM 19 O6 G A 61 -22.076 -52.098 9.795 1.00 74.09 O
ATOM 20 N1 G A 61 -22.995 -50.258 10.749 1.00 71.44 N
ATOM 21 C2 G A 61 -23.378 -48.937 10.741 1.00 70.99 C
ATOM 22 N2 G A 61 -23.958 -48.485 11.860 1.00 70.10 N
ATOM 23 N3 G A 61 -23.204 -48.119 9.707 1.00 71.66 N
ATOM 24 C4 G A 61 -22.602 -48.734 8.654 1.00 73.28 C
ATOM 25 P A A 62 -17.906 -45.998 6.266 1.00 73.77 P
ATOM 26 OP1 A A 62 -17.551 -46.405 4.885 1.00 74.93 O
ATOM 27 OP2 A A 62 -17.914 -47.000 7.360 1.00 72.68 O
ATOM 28 O5' A A 62 -16.949 -44.806 6.707 1.00 71.77 O
TER
ATOM 1 O3' C B 38 -20.781 -51.578 14.567 1.00 67.25 O
ATOM 2 P A B 39 -22.384 -51.572 14.530 1.00 67.19 P
ATOM 3 OP1 A B 39 -22.856 -52.657 15.421 1.00 67.20 O
ATOM 4 OP2 A B 39 -22.849 -51.507 13.123 1.00 67.68 O
ATOM 5 O5' A B 39 -22.714 -50.160 15.201 1.00 65.62 O
ATOM 6 C5' A B 39 -22.445 -49.923 16.579 1.00 63.66 C
ATOM 7 C4' A B 39 -22.733 -48.476 16.915 1.00 62.10 C
ATOM 8 O4' A B 39 -21.727 -47.628 16.320 1.00 61.97 O
ATOM 9 C3' A B 39 -24.016 -47.917 16.331 1.00 62.01 C
ATOM 10 O3' A B 39 -25.117 -48.357 17.107 1.00 62.00 O
ATOM 11 C2' A B 39 -23.759 -46.417 16.448 1.00 61.36 C
ATOM 12 O2' A B 39 -23.954 -45.899 17.754 1.00 60.31 O
ATOM 13 C1' A B 39 -22.279 -46.342 16.092 1.00 61.30 C
ATOM 14 N9 A B 39 -22.002 -45.927 14.715 1.00 61.69 N
ATOM 15 C8 A B 39 -21.636 -46.729 13.671 1.00 62.82 C
ATOM 16 N7 A B 39 -21.437 -46.089 12.543 1.00 63.30 N
ATOM 17 C5 A B 39 -21.692 -44.770 12.866 1.00 62.50 C
ATOM 18 C6 A B 39 -21.656 -43.580 12.105 1.00 63.13 C
ATOM 19 N6 A B 39 -21.340 -43.540 10.804 1.00 64.24 N
ATOM 20 N1 A B 39 -21.966 -42.424 12.734 1.00 62.56 N
ATOM 21 C2 A B 39 -22.284 -42.462 14.035 1.00 61.53 C
ATOM 22 N3 A B 39 -22.347 -43.518 14.848 1.00 61.08 N
ATOM 23 C4 A B 39 -22.039 -44.653 14.200 1.00 61.51 C
ATOM 24 P A B 40 -26.496 -48.786 16.414 1.00 62.41 P
ATOM 25 OP1 A B 40 -27.288 -49.489 17.450 1.00 61.90 O
ATOM 26 OP2 A B 40 -26.217 -49.454 15.120 1.00 63.46 O
ATOM 27 O5' A B 40 -27.164 -47.370 16.082 1.00 61.72 O
TER
ATOM 2 P G A 61 -20.614 -48.810 2.662 1.00 87.39 P
ATOM 3 OP1 G A 61 -19.710 -48.250 1.632 1.00 87.69 O
ATOM 4 OP2 G A 61 -20.414 -50.183 3.198 1.00 86.96 O
ATOM 5 O5' G A 61 -20.625 -47.813 3.914 1.00 84.24 O
ATOM 6 C5' G A 61 -21.033 -46.449 3.793 1.00 81.56 C
ATOM 7 C4' G A 61 -21.470 -45.909 5.142 1.00 78.29 C
ATOM 8 O4' G A 61 -22.624 -46.640 5.640 1.00 77.66 O
ATOM 9 C3' G A 61 -20.483 -46.114 6.281 1.00 76.27 C
ATOM 10 O3' G A 61 -19.340 -45.282 6.205 1.00 74.65 O
ATOM 11 C2' G A 61 -21.393 -45.850 7.476 1.00 75.17 C
ATOM 12 O2' G A 61 -21.844 -44.510 7.575 1.00 74.95 O
ATOM 13 C1' G A 61 -22.534 -46.766 7.053 1.00 75.53 C
ATOM 14 N9 G A 61 -22.290 -48.158 7.441 1.00 74.57 N
ATOM 15 C8 G A 61 -21.694 -49.153 6.699 1.00 75.54 C
ATOM 16 N7 G A 61 -21.608 -50.294 7.325 1.00 75.48 N
ATOM 17 C5 G A 61 -22.181 -50.045 8.567 1.00 73.83 C
ATOM 18 C6 G A 61 -22.377 -50.903 9.681 1.00 73.04 C
ATOM 19 O6 G A 61 -22.076 -52.098 9.795 1.00 74.09 O
ATOM 20 N1 G A 61 -22.995 -50.258 10.749 1.00 71.44 N
ATOM 21 C2 G A 61 -23.378 -48.937 10.741 1.00 70.99 C
ATOM 22 N2 G A 61 -23.958 -48.485 11.860 1.00 70.10 N
ATOM 23 N3 G A 61 -23.204 -48.119 9.707 1.00 71.66 N
ATOM 24 C4 G A 61 -22.602 -48.734 8.654 1.00 73.28 C
ATOM 25 P A A 62 -17.906 -45.998 6.266 1.00 73.77 P
ATOM 26 OP1 A A 62 -17.551 -46.405 4.885 1.00 74.93 O
ATOM 27 OP2 A A 62 -17.914 -47.000 7.360 1.00 72.68 O
ATOM 28 O5' A A 62 -16.949 -44.806 6.707 1.00 71.77 O
TER
ATOM 1 O3' C B 38 -20.781 -51.578 14.567 1.00 67.25 O
ATOM 2 P A B 39 -22.384 -51.572 14.530 1.00 67.19 P
ATOM 3 OP1 A B 39 -22.856 -52.657 15.421 1.00 67.20 O
ATOM 4 OP2 A B 39 -22.849 -51.507 13.123 1.00 67.68 O
ATOM 5 O5' A B 39 -22.714 -50.160 15.201 1.00 65.62 O
ATOM 6 C5' A B 39 -22.445 -49.923 16.579 1.00 63.66 C
ATOM 7 C4' A B 39 -22.733 -48.476 16.915 1.00 62.10 C
ATOM 8 O4' A B 39 -21.727 -47.628 16.320 1.00 61.97 O
ATOM 9 C3' A B 39 -24.016 -47.917 16.331 1.00 62.01 C
ATOM 10 O3' A B 39 -25.117 -48.357 17.107 1.00 62.00 O
ATOM 11 C2' A B 39 -23.759 -46.417 16.448 1.00 61.36 C
ATOM 12 O2' A B 39 -23.954 -45.899 17.754 1.00 60.31 O
ATOM 13 C1' A B 39 -22.279 -46.342 16.092 1.00 61.30 C
ATOM 14 N9 A B 39 -22.002 -45.927 14.715 1.00 61.69 N
ATOM 15 C8 A B 39 -21.636 -46.729 13.671 1.00 62.82 C
ATOM 16 N7 A B 39 -21.437 -46.089 12.543 1.00 63.30 N
ATOM 17 C5 A B 39 -21.692 -44.770 12.866 1.00 62.50 C
ATOM 18 C6 A B 39 -21.656 -43.580 12.105 1.00 63.13 C
ATOM 19 N6 A B 39 -21.340 -43.540 10.804 1.00 64.24 N
ATOM 20 N1 A B 39 -21.966 -42.424 12.734 1.00 62.56 N
ATOM 21 C2 A B 39 -22.284 -42.462 14.035 1.00 61.53 C
ATOM 22 N3 A B 39 -22.347 -43.518 14.848 1.00 61.08 N
ATOM 23 C4 A B 39 -22.039 -44.653 14.200 1.00 61.51 C
ATOM 24 P A B 40 -26.496 -48.786 16.414 1.00 62.41 P
ATOM 25 OP1 A B 40 -27.288 -49.489 17.450 1.00 61.90 O
ATOM 26 OP2 A B 40 -26.217 -49.454 15.120 1.00 63.46 O
ATOM 27 O5' A B 40 -27.164 -47.370 16.082 1.00 61.72 O
TER
Atoms:
OP1: (-19.710,-48.250,1.632)
OP2: (-20.414,-50.183,3.198)
C3': (-20.483,-46.114,6.281)
C1': (-22.534,-46.766,7.053)
C5': (-21.033,-46.449,3.793)
O6: (-22.076,-52.098,9.795)
O4': (-22.624,-46.640,5.640)
C8: (-21.694,-49.153,6.699)
C2: (-23.378,-48.937,10.741)
C6: (-22.377,-50.903,9.681)
C5: (-22.181,-50.045,8.567)
C4: (-22.602,-48.734,8.654)
P: (-20.614,-48.810,2.662)
C4': (-21.470,-45.909,5.142)
C2': (-21.393,-45.850,7.476)
O2': (-21.844,-44.510,7.575)
N1: (-22.995,-50.258,10.749)
N2: (-23.958,-48.485,11.860)
N3: (-23.204,-48.119,9.707)
N7: (-21.608,-50.294,7.325)
N9: (-22.290,-48.158,7.441)
O5': (-20.625,-47.813,3.914)
O3': (-19.340,-45.282,6.205)
OP2: (-20.414,-50.183,3.198)
C3': (-20.483,-46.114,6.281)
C1': (-22.534,-46.766,7.053)
C5': (-21.033,-46.449,3.793)
O6: (-22.076,-52.098,9.795)
O4': (-22.624,-46.640,5.640)
C8: (-21.694,-49.153,6.699)
C2: (-23.378,-48.937,10.741)
C6: (-22.377,-50.903,9.681)
C5: (-22.181,-50.045,8.567)
C4: (-22.602,-48.734,8.654)
P: (-20.614,-48.810,2.662)
C4': (-21.470,-45.909,5.142)
C2': (-21.393,-45.850,7.476)
O2': (-21.844,-44.510,7.575)
N1: (-22.995,-50.258,10.749)
N2: (-23.958,-48.485,11.860)
N3: (-23.204,-48.119,9.707)
N7: (-21.608,-50.294,7.325)
N9: (-22.290,-48.158,7.441)
O5': (-20.625,-47.813,3.914)
O3': (-19.340,-45.282,6.205)
OP1: (-22.856,-52.657,15.421)
OP2: (-22.849,-51.507,13.123)
C3': (-24.016,-47.917,16.331)
C1': (-22.279,-46.342,16.092)
C5': (-22.445,-49.923,16.579)
O4': (-21.727,-47.628,16.320)
C8: (-21.636,-46.729,13.671)
O2': (-23.954,-45.899,17.754)
C6: (-21.656,-43.580,12.105)
C5: (-21.692,-44.770,12.866)
C4: (-22.039,-44.653,14.200)
P: (-22.384,-51.572,14.530)
C4': (-22.733,-48.476,16.915)
C2': (-23.759,-46.417,16.448)
C2: (-22.284,-42.462,14.035)
N1: (-21.966,-42.424,12.734)
N3: (-22.347,-43.518,14.848)
N6: (-21.340,-43.540,10.804)
N7: (-21.437,-46.089,12.543)
N9: (-22.002,-45.927,14.715)
O5': (-22.714,-50.160,15.201)
O3': (-25.117,-48.357,17.107)
OP2: (-22.849,-51.507,13.123)
C3': (-24.016,-47.917,16.331)
C1': (-22.279,-46.342,16.092)
C5': (-22.445,-49.923,16.579)
O4': (-21.727,-47.628,16.320)
C8: (-21.636,-46.729,13.671)
O2': (-23.954,-45.899,17.754)
C6: (-21.656,-43.580,12.105)
C5: (-21.692,-44.770,12.866)
C4: (-22.039,-44.653,14.200)
P: (-22.384,-51.572,14.530)
C4': (-22.733,-48.476,16.915)
C2': (-23.759,-46.417,16.448)
C2: (-22.284,-42.462,14.035)
N1: (-21.966,-42.424,12.734)
N3: (-22.347,-43.518,14.848)
N6: (-21.340,-43.540,10.804)
N7: (-21.437,-46.089,12.543)
N9: (-22.002,-45.927,14.715)
O5': (-22.714,-50.160,15.201)
O3': (-25.117,-48.357,17.107)
Image (generated by PyMOL):