Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2CKY:B19:B17
Extra
PDB:
ATOM 1 O3' U A 18 6.557 -37.959 -87.437 1.00 47.97 O
ATOM 2 P C A 19 5.089 -38.597 -87.669 1.00 49.07 P
ATOM 3 OP1 C A 19 5.291 -39.893 -88.374 1.00 48.89 O
ATOM 4 OP2 C A 19 4.230 -37.567 -88.300 1.00 48.14 O
ATOM 5 O5' C A 19 4.542 -38.876 -86.174 1.00 46.59 O
ATOM 6 C5' C A 19 4.038 -37.839 -85.336 1.00 43.44 C
ATOM 7 C4' C A 19 2.948 -38.354 -84.421 1.00 42.21 C
ATOM 8 O4' C A 19 3.215 -39.729 -84.092 1.00 41.00 O
ATOM 9 C3' C A 19 2.849 -37.660 -83.076 1.00 41.77 C
ATOM 10 O3' C A 19 1.989 -36.560 -83.160 1.00 43.94 O
ATOM 11 C2' C A 19 2.216 -38.737 -82.225 1.00 41.33 C
ATOM 12 O2' C A 19 0.831 -38.866 -82.472 1.00 41.60 O
ATOM 13 C1' C A 19 3.015 -39.946 -82.702 1.00 39.42 C
ATOM 14 N1 C A 19 4.327 -40.127 -81.968 1.00 37.31 N
ATOM 15 C2 C A 19 4.306 -40.352 -80.580 1.00 37.47 C
ATOM 16 O2 C A 19 3.226 -40.397 -79.987 1.00 38.55 O
ATOM 17 N3 C A 19 5.460 -40.508 -79.896 1.00 36.90 N
ATOM 18 C4 C A 19 6.607 -40.455 -80.557 1.00 36.85 C
ATOM 19 N4 C A 19 7.727 -40.619 -79.846 1.00 37.65 N
ATOM 20 C5 C A 19 6.654 -40.231 -81.968 1.00 35.75 C
ATOM 21 C6 C A 19 5.510 -40.082 -82.639 1.00 35.15 C
ATOM 22 P A A 20 2.294 -35.124 -82.522 1.00 45.08 P
ATOM 23 OP1 A A 20 1.595 -34.213 -83.445 1.00 44.94 O
ATOM 24 OP2 A A 20 3.753 -34.998 -82.292 1.00 46.22 O
ATOM 25 O5' A A 20 1.549 -35.004 -81.106 1.00 43.74 O
TER
ATOM 1 O3' G B 16 15.886 -38.827 -81.706 1.00 45.15 O
ATOM 2 P U B 17 14.980 -40.015 -81.107 1.00 45.77 P
ATOM 3 OP1 U B 17 14.232 -39.525 -79.907 1.00 43.37 O
ATOM 4 OP2 U B 17 15.890 -41.187 -80.991 1.00 47.00 O
ATOM 5 O5' U B 17 13.947 -40.240 -82.314 1.00 42.86 O
ATOM 6 C5' U B 17 14.246 -40.841 -83.566 1.00 42.21 C
ATOM 7 C4' U B 17 13.170 -41.882 -83.811 1.00 43.44 C
ATOM 8 O4' U B 17 13.211 -42.801 -82.691 1.00 43.48 O
ATOM 9 C3' U B 17 11.719 -41.394 -83.862 1.00 43.81 C
ATOM 10 O3' U B 17 10.956 -42.151 -84.774 1.00 48.30 O
ATOM 11 C2' U B 17 11.179 -41.613 -82.462 1.00 42.54 C
ATOM 12 O2' U B 17 9.776 -41.800 -82.416 1.00 40.72 O
ATOM 13 C1' U B 17 11.936 -42.886 -82.110 1.00 42.13 C
ATOM 14 N1 U B 17 12.027 -43.065 -80.652 1.00 41.29 N
ATOM 15 C2 U B 17 10.867 -43.472 -80.061 1.00 41.56 C
ATOM 16 O2 U B 17 9.855 -43.672 -80.704 1.00 42.08 O
ATOM 17 N3 U B 17 10.917 -43.656 -78.715 1.00 41.89 N
ATOM 18 C4 U B 17 12.009 -43.420 -77.917 1.00 42.76 C
ATOM 19 O4 U B 17 11.883 -43.624 -76.723 1.00 44.11 O
ATOM 20 C5 U B 17 13.206 -42.983 -78.588 1.00 42.06 C
ATOM 21 C6 U B 17 13.173 -42.822 -79.920 1.00 41.24 C
ATOM 22 P U B 18 10.916 -41.643 -86.295 1.00 54.21 P
ATOM 23 OP1 U B 18 10.440 -42.761 -87.154 1.00 54.23 O
ATOM 24 OP2 U B 18 12.230 -40.997 -86.575 1.00 53.86 O
ATOM 25 O5' U B 18 9.750 -40.532 -86.289 1.00 51.29 O
TER
ATOM 2 P C A 19 5.089 -38.597 -87.669 1.00 49.07 P
ATOM 3 OP1 C A 19 5.291 -39.893 -88.374 1.00 48.89 O
ATOM 4 OP2 C A 19 4.230 -37.567 -88.300 1.00 48.14 O
ATOM 5 O5' C A 19 4.542 -38.876 -86.174 1.00 46.59 O
ATOM 6 C5' C A 19 4.038 -37.839 -85.336 1.00 43.44 C
ATOM 7 C4' C A 19 2.948 -38.354 -84.421 1.00 42.21 C
ATOM 8 O4' C A 19 3.215 -39.729 -84.092 1.00 41.00 O
ATOM 9 C3' C A 19 2.849 -37.660 -83.076 1.00 41.77 C
ATOM 10 O3' C A 19 1.989 -36.560 -83.160 1.00 43.94 O
ATOM 11 C2' C A 19 2.216 -38.737 -82.225 1.00 41.33 C
ATOM 12 O2' C A 19 0.831 -38.866 -82.472 1.00 41.60 O
ATOM 13 C1' C A 19 3.015 -39.946 -82.702 1.00 39.42 C
ATOM 14 N1 C A 19 4.327 -40.127 -81.968 1.00 37.31 N
ATOM 15 C2 C A 19 4.306 -40.352 -80.580 1.00 37.47 C
ATOM 16 O2 C A 19 3.226 -40.397 -79.987 1.00 38.55 O
ATOM 17 N3 C A 19 5.460 -40.508 -79.896 1.00 36.90 N
ATOM 18 C4 C A 19 6.607 -40.455 -80.557 1.00 36.85 C
ATOM 19 N4 C A 19 7.727 -40.619 -79.846 1.00 37.65 N
ATOM 20 C5 C A 19 6.654 -40.231 -81.968 1.00 35.75 C
ATOM 21 C6 C A 19 5.510 -40.082 -82.639 1.00 35.15 C
ATOM 22 P A A 20 2.294 -35.124 -82.522 1.00 45.08 P
ATOM 23 OP1 A A 20 1.595 -34.213 -83.445 1.00 44.94 O
ATOM 24 OP2 A A 20 3.753 -34.998 -82.292 1.00 46.22 O
ATOM 25 O5' A A 20 1.549 -35.004 -81.106 1.00 43.74 O
TER
ATOM 1 O3' G B 16 15.886 -38.827 -81.706 1.00 45.15 O
ATOM 2 P U B 17 14.980 -40.015 -81.107 1.00 45.77 P
ATOM 3 OP1 U B 17 14.232 -39.525 -79.907 1.00 43.37 O
ATOM 4 OP2 U B 17 15.890 -41.187 -80.991 1.00 47.00 O
ATOM 5 O5' U B 17 13.947 -40.240 -82.314 1.00 42.86 O
ATOM 6 C5' U B 17 14.246 -40.841 -83.566 1.00 42.21 C
ATOM 7 C4' U B 17 13.170 -41.882 -83.811 1.00 43.44 C
ATOM 8 O4' U B 17 13.211 -42.801 -82.691 1.00 43.48 O
ATOM 9 C3' U B 17 11.719 -41.394 -83.862 1.00 43.81 C
ATOM 10 O3' U B 17 10.956 -42.151 -84.774 1.00 48.30 O
ATOM 11 C2' U B 17 11.179 -41.613 -82.462 1.00 42.54 C
ATOM 12 O2' U B 17 9.776 -41.800 -82.416 1.00 40.72 O
ATOM 13 C1' U B 17 11.936 -42.886 -82.110 1.00 42.13 C
ATOM 14 N1 U B 17 12.027 -43.065 -80.652 1.00 41.29 N
ATOM 15 C2 U B 17 10.867 -43.472 -80.061 1.00 41.56 C
ATOM 16 O2 U B 17 9.855 -43.672 -80.704 1.00 42.08 O
ATOM 17 N3 U B 17 10.917 -43.656 -78.715 1.00 41.89 N
ATOM 18 C4 U B 17 12.009 -43.420 -77.917 1.00 42.76 C
ATOM 19 O4 U B 17 11.883 -43.624 -76.723 1.00 44.11 O
ATOM 20 C5 U B 17 13.206 -42.983 -78.588 1.00 42.06 C
ATOM 21 C6 U B 17 13.173 -42.822 -79.920 1.00 41.24 C
ATOM 22 P U B 18 10.916 -41.643 -86.295 1.00 54.21 P
ATOM 23 OP1 U B 18 10.440 -42.761 -87.154 1.00 54.23 O
ATOM 24 OP2 U B 18 12.230 -40.997 -86.575 1.00 53.86 O
ATOM 25 O5' U B 18 9.750 -40.532 -86.289 1.00 51.29 O
TER
Atoms:
C2: (4.306,-40.352,-80.580)
OP1: (5.291,-39.893,-88.374)
OP2: (4.230,-37.567,-88.300)
C4: (6.607,-40.455,-80.557)
O5': (4.542,-38.876,-86.174)
C3': (2.849,-37.660,-83.076)
C1': (3.015,-39.946,-82.702)
O4': (3.215,-39.729,-84.092)
C5': (4.038,-37.839,-85.336)
P: (5.089,-38.597,-87.669)
O2: (3.226,-40.397,-79.987)
C4': (2.948,-38.354,-84.421)
C2': (2.216,-38.737,-82.225)
O2': (0.831,-38.866,-82.472)
N1: (4.327,-40.127,-81.968)
N3: (5.460,-40.508,-79.896)
N4: (7.727,-40.619,-79.846)
C6: (5.510,-40.082,-82.639)
C5: (6.654,-40.231,-81.968)
O3': (1.989,-36.560,-83.160)
OP1: (5.291,-39.893,-88.374)
OP2: (4.230,-37.567,-88.300)
C4: (6.607,-40.455,-80.557)
O5': (4.542,-38.876,-86.174)
C3': (2.849,-37.660,-83.076)
C1': (3.015,-39.946,-82.702)
O4': (3.215,-39.729,-84.092)
C5': (4.038,-37.839,-85.336)
P: (5.089,-38.597,-87.669)
O2: (3.226,-40.397,-79.987)
C4': (2.948,-38.354,-84.421)
C2': (2.216,-38.737,-82.225)
O2': (0.831,-38.866,-82.472)
N1: (4.327,-40.127,-81.968)
N3: (5.460,-40.508,-79.896)
N4: (7.727,-40.619,-79.846)
C6: (5.510,-40.082,-82.639)
C5: (6.654,-40.231,-81.968)
O3': (1.989,-36.560,-83.160)
C4: (12.009,-43.420,-77.917)
N3: (10.917,-43.656,-78.715)
OP1: (14.232,-39.525,-79.907)
OP2: (15.890,-41.187,-80.991)
C2: (10.867,-43.472,-80.061)
C1': (11.936,-42.886,-82.110)
C3': (11.719,-41.394,-83.862)
O5': (13.947,-40.240,-82.314)
O4': (13.211,-42.801,-82.691)
C5': (14.246,-40.841,-83.566)
P: (14.980,-40.015,-81.107)
C4': (13.170,-41.882,-83.811)
C2': (11.179,-41.613,-82.462)
O2': (9.776,-41.800,-82.416)
N1: (12.027,-43.065,-80.652)
O4: (11.883,-43.624,-76.723)
O2: (9.855,-43.672,-80.704)
C6: (13.173,-42.822,-79.920)
C5: (13.206,-42.983,-78.588)
O3': (10.956,-42.151,-84.774)
N3: (10.917,-43.656,-78.715)
OP1: (14.232,-39.525,-79.907)
OP2: (15.890,-41.187,-80.991)
C2: (10.867,-43.472,-80.061)
C1': (11.936,-42.886,-82.110)
C3': (11.719,-41.394,-83.862)
O5': (13.947,-40.240,-82.314)
O4': (13.211,-42.801,-82.691)
C5': (14.246,-40.841,-83.566)
P: (14.980,-40.015,-81.107)
C4': (13.170,-41.882,-83.811)
C2': (11.179,-41.613,-82.462)
O2': (9.776,-41.800,-82.416)
N1: (12.027,-43.065,-80.652)
O4: (11.883,-43.624,-76.723)
O2: (9.855,-43.672,-80.704)
C6: (13.173,-42.822,-79.920)
C5: (13.206,-42.983,-78.588)
O3': (10.956,-42.151,-84.774)
Image (generated by PyMOL):