Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A540:A856
Extra
PDB:
ATOM 1 O3' U A 539 -20.045 76.542 81.125 1.00 18.30 O
ATOM 2 P C A 540 -19.062 75.474 81.813 1.00 25.66 P
ATOM 3 OP1 C A 540 -19.610 74.109 81.595 1.00 23.81 O
ATOM 4 OP2 C A 540 -18.818 75.947 83.190 1.00 20.57 O
ATOM 5 O5' C A 540 -17.694 75.598 80.999 1.00 21.59 O
ATOM 6 C5' C A 540 -17.059 76.869 80.829 1.00 20.47 C
ATOM 7 C4' C A 540 -15.636 76.816 81.318 1.00 21.83 C
ATOM 8 O4' C A 540 -15.393 78.062 82.008 1.00 23.67 O
ATOM 9 C3' C A 540 -15.297 75.702 82.307 1.00 22.74 C
ATOM 10 O3' C A 540 -13.908 75.365 82.175 1.00 21.35 O
ATOM 11 C2' C A 540 -15.473 76.383 83.662 1.00 23.24 C
ATOM 12 O2' C A 540 -14.659 75.822 84.675 1.00 26.01 O
ATOM 13 C1' C A 540 -15.019 77.809 83.347 1.00 23.33 C
ATOM 14 N1 C A 540 -15.624 78.858 84.190 1.00 16.72 N
ATOM 15 C2 C A 540 -14.784 79.759 84.873 1.00 17.14 C
ATOM 16 O2 C A 540 -13.555 79.640 84.768 1.00 15.64 O
ATOM 17 N3 C A 540 -15.341 80.734 85.623 1.00 18.23 N
ATOM 18 C4 C A 540 -16.674 80.829 85.711 1.00 17.34 C
ATOM 19 N4 C A 540 -17.190 81.803 86.457 1.00 20.22 N
ATOM 20 C5 C A 540 -17.542 79.928 85.037 1.00 18.03 C
ATOM 21 C6 C A 540 -16.982 78.966 84.299 1.00 17.64 C
ATOM 22 P A A 541 -13.418 74.326 81.040 1.00 8.13 P
ATOM 23 OP1 A A 541 -14.178 73.054 81.246 1.00 4.86 O
ATOM 24 OP2 A A 541 -11.908 74.299 80.981 1.00 4.86 O
ATOM 25 O5' A A 541 -13.895 75.010 79.683 1.00 0.79 O
TER
ATOM 1 O3' C B 855 -18.815 88.719 85.705 1.00 7.34 O
ATOM 2 P U B 856 -19.152 87.643 86.844 1.00 68.09 P
ATOM 3 OP1 U B 856 -20.273 88.201 87.659 1.00 31.15 O
ATOM 4 OP2 U B 856 -17.893 87.201 87.508 1.00 32.19 O
ATOM 5 O5' U B 856 -19.728 86.418 86.023 1.00 15.23 O
ATOM 6 C5' U B 856 -20.948 86.567 85.292 1.00 15.40 C
ATOM 7 C4' U B 856 -21.392 85.238 84.735 1.00 16.95 C
ATOM 8 O4' U B 856 -20.464 84.816 83.704 1.00 17.58 O
ATOM 9 C3' U B 856 -21.468 84.107 85.751 1.00 16.85 C
ATOM 10 O3' U B 856 -22.588 83.304 85.452 1.00 17.26 O
ATOM 11 C2' U B 856 -20.181 83.337 85.502 1.00 17.44 C
ATOM 12 O2' U B 856 -20.279 81.976 85.840 1.00 18.85 O
ATOM 13 C1' U B 856 -20.006 83.523 83.998 1.00 18.12 C
ATOM 14 N1 U B 856 -18.632 83.372 83.496 1.00 4.73 N
ATOM 15 C2 U B 856 -18.427 82.366 82.589 1.00 4.33 C
ATOM 16 O2 U B 856 -19.344 81.706 82.138 1.00 4.30 O
ATOM 17 N3 U B 856 -17.122 82.168 82.217 1.00 3.92 N
ATOM 18 C4 U B 856 -16.019 82.881 82.640 1.00 5.55 C
ATOM 19 O4 U B 856 -14.877 82.483 82.345 1.00 6.85 O
ATOM 20 C5 U B 856 -16.328 83.960 83.535 1.00 5.09 C
ATOM 21 C6 U B 856 -17.594 84.163 83.921 1.00 4.98 C
ATOM 22 P G B 857 -23.625 82.930 86.616 1.00 43.02 P
ATOM 23 OP1 G B 857 -22.995 83.299 87.892 1.00 20.00 O
ATOM 24 OP2 G B 857 -24.020 81.525 86.379 1.00 21.98 O
ATOM 25 O5' G B 857 -24.880 83.888 86.382 1.00 14.73 O
TER
ATOM 2 P C A 540 -19.062 75.474 81.813 1.00 25.66 P
ATOM 3 OP1 C A 540 -19.610 74.109 81.595 1.00 23.81 O
ATOM 4 OP2 C A 540 -18.818 75.947 83.190 1.00 20.57 O
ATOM 5 O5' C A 540 -17.694 75.598 80.999 1.00 21.59 O
ATOM 6 C5' C A 540 -17.059 76.869 80.829 1.00 20.47 C
ATOM 7 C4' C A 540 -15.636 76.816 81.318 1.00 21.83 C
ATOM 8 O4' C A 540 -15.393 78.062 82.008 1.00 23.67 O
ATOM 9 C3' C A 540 -15.297 75.702 82.307 1.00 22.74 C
ATOM 10 O3' C A 540 -13.908 75.365 82.175 1.00 21.35 O
ATOM 11 C2' C A 540 -15.473 76.383 83.662 1.00 23.24 C
ATOM 12 O2' C A 540 -14.659 75.822 84.675 1.00 26.01 O
ATOM 13 C1' C A 540 -15.019 77.809 83.347 1.00 23.33 C
ATOM 14 N1 C A 540 -15.624 78.858 84.190 1.00 16.72 N
ATOM 15 C2 C A 540 -14.784 79.759 84.873 1.00 17.14 C
ATOM 16 O2 C A 540 -13.555 79.640 84.768 1.00 15.64 O
ATOM 17 N3 C A 540 -15.341 80.734 85.623 1.00 18.23 N
ATOM 18 C4 C A 540 -16.674 80.829 85.711 1.00 17.34 C
ATOM 19 N4 C A 540 -17.190 81.803 86.457 1.00 20.22 N
ATOM 20 C5 C A 540 -17.542 79.928 85.037 1.00 18.03 C
ATOM 21 C6 C A 540 -16.982 78.966 84.299 1.00 17.64 C
ATOM 22 P A A 541 -13.418 74.326 81.040 1.00 8.13 P
ATOM 23 OP1 A A 541 -14.178 73.054 81.246 1.00 4.86 O
ATOM 24 OP2 A A 541 -11.908 74.299 80.981 1.00 4.86 O
ATOM 25 O5' A A 541 -13.895 75.010 79.683 1.00 0.79 O
TER
ATOM 1 O3' C B 855 -18.815 88.719 85.705 1.00 7.34 O
ATOM 2 P U B 856 -19.152 87.643 86.844 1.00 68.09 P
ATOM 3 OP1 U B 856 -20.273 88.201 87.659 1.00 31.15 O
ATOM 4 OP2 U B 856 -17.893 87.201 87.508 1.00 32.19 O
ATOM 5 O5' U B 856 -19.728 86.418 86.023 1.00 15.23 O
ATOM 6 C5' U B 856 -20.948 86.567 85.292 1.00 15.40 C
ATOM 7 C4' U B 856 -21.392 85.238 84.735 1.00 16.95 C
ATOM 8 O4' U B 856 -20.464 84.816 83.704 1.00 17.58 O
ATOM 9 C3' U B 856 -21.468 84.107 85.751 1.00 16.85 C
ATOM 10 O3' U B 856 -22.588 83.304 85.452 1.00 17.26 O
ATOM 11 C2' U B 856 -20.181 83.337 85.502 1.00 17.44 C
ATOM 12 O2' U B 856 -20.279 81.976 85.840 1.00 18.85 O
ATOM 13 C1' U B 856 -20.006 83.523 83.998 1.00 18.12 C
ATOM 14 N1 U B 856 -18.632 83.372 83.496 1.00 4.73 N
ATOM 15 C2 U B 856 -18.427 82.366 82.589 1.00 4.33 C
ATOM 16 O2 U B 856 -19.344 81.706 82.138 1.00 4.30 O
ATOM 17 N3 U B 856 -17.122 82.168 82.217 1.00 3.92 N
ATOM 18 C4 U B 856 -16.019 82.881 82.640 1.00 5.55 C
ATOM 19 O4 U B 856 -14.877 82.483 82.345 1.00 6.85 O
ATOM 20 C5 U B 856 -16.328 83.960 83.535 1.00 5.09 C
ATOM 21 C6 U B 856 -17.594 84.163 83.921 1.00 4.98 C
ATOM 22 P G B 857 -23.625 82.930 86.616 1.00 43.02 P
ATOM 23 OP1 G B 857 -22.995 83.299 87.892 1.00 20.00 O
ATOM 24 OP2 G B 857 -24.020 81.525 86.379 1.00 21.98 O
ATOM 25 O5' G B 857 -24.880 83.888 86.382 1.00 14.73 O
TER
Atoms:
C2: (-14.784,79.759,84.873)
OP1: (-19.610,74.109,81.595)
OP2: (-18.818,75.947,83.190)
C4: (-16.674,80.829,85.711)
O5': (-17.694,75.598,80.999)
C3': (-15.297,75.702,82.307)
C1': (-15.019,77.809,83.347)
O4': (-15.393,78.062,82.008)
C5': (-17.059,76.869,80.829)
P: (-19.062,75.474,81.813)
O2: (-13.555,79.640,84.768)
C4': (-15.636,76.816,81.318)
C2': (-15.473,76.383,83.662)
O2': (-14.659,75.822,84.675)
N1: (-15.624,78.858,84.190)
N3: (-15.341,80.734,85.623)
N4: (-17.190,81.803,86.457)
C6: (-16.982,78.966,84.299)
C5: (-17.542,79.928,85.037)
O3': (-13.908,75.365,82.175)
OP1: (-19.610,74.109,81.595)
OP2: (-18.818,75.947,83.190)
C4: (-16.674,80.829,85.711)
O5': (-17.694,75.598,80.999)
C3': (-15.297,75.702,82.307)
C1': (-15.019,77.809,83.347)
O4': (-15.393,78.062,82.008)
C5': (-17.059,76.869,80.829)
P: (-19.062,75.474,81.813)
O2: (-13.555,79.640,84.768)
C4': (-15.636,76.816,81.318)
C2': (-15.473,76.383,83.662)
O2': (-14.659,75.822,84.675)
N1: (-15.624,78.858,84.190)
N3: (-15.341,80.734,85.623)
N4: (-17.190,81.803,86.457)
C6: (-16.982,78.966,84.299)
C5: (-17.542,79.928,85.037)
O3': (-13.908,75.365,82.175)
C4: (-16.019,82.881,82.640)
N3: (-17.122,82.168,82.217)
OP1: (-20.273,88.201,87.659)
OP2: (-17.893,87.201,87.508)
C2: (-18.427,82.366,82.589)
C1': (-20.006,83.523,83.998)
C3': (-21.468,84.107,85.751)
O5': (-19.728,86.418,86.023)
O4': (-20.464,84.816,83.704)
C5': (-20.948,86.567,85.292)
P: (-19.152,87.643,86.844)
C4': (-21.392,85.238,84.735)
C2': (-20.181,83.337,85.502)
O2': (-20.279,81.976,85.840)
N1: (-18.632,83.372,83.496)
O4: (-14.877,82.483,82.345)
O2: (-19.344,81.706,82.138)
C6: (-17.594,84.163,83.921)
C5: (-16.328,83.960,83.535)
O3': (-22.588,83.304,85.452)
N3: (-17.122,82.168,82.217)
OP1: (-20.273,88.201,87.659)
OP2: (-17.893,87.201,87.508)
C2: (-18.427,82.366,82.589)
C1': (-20.006,83.523,83.998)
C3': (-21.468,84.107,85.751)
O5': (-19.728,86.418,86.023)
O4': (-20.464,84.816,83.704)
C5': (-20.948,86.567,85.292)
P: (-19.152,87.643,86.844)
C4': (-21.392,85.238,84.735)
C2': (-20.181,83.337,85.502)
O2': (-20.279,81.976,85.840)
N1: (-18.632,83.372,83.496)
O4: (-14.877,82.483,82.345)
O2: (-19.344,81.706,82.138)
C6: (-17.594,84.163,83.921)
C5: (-16.328,83.960,83.535)
O3': (-22.588,83.304,85.452)
Image (generated by PyMOL):