Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0580:0553
Extra
PDB:
ATOM 1 O3' A A 579 -6.585 102.432 106.154 1.00 49.79 O
ATOM 2 P G A 580 -6.469 102.788 104.592 1.00 48.43 P
ATOM 3 OP1 G A 580 -6.204 104.247 104.505 1.00 49.24 O
ATOM 4 OP2 G A 580 -7.643 102.207 103.881 1.00 49.55 O
ATOM 5 O5' G A 580 -5.183 101.979 104.108 1.00 47.99 O
ATOM 6 C5' G A 580 -3.857 102.310 104.578 1.00 44.65 C
ATOM 7 C4' G A 580 -2.853 101.366 103.964 1.00 44.96 C
ATOM 8 O4' G A 580 -3.107 100.018 104.440 1.00 44.36 O
ATOM 9 C3' G A 580 -2.941 101.266 102.450 1.00 45.74 C
ATOM 10 O3' G A 580 -2.118 102.249 101.835 1.00 47.64 O
ATOM 11 C2' G A 580 -2.388 99.874 102.169 1.00 45.23 C
ATOM 12 O2' G A 580 -0.979 99.852 102.106 1.00 48.37 O
ATOM 13 C1' G A 580 -2.878 99.088 103.392 1.00 44.38 C
ATOM 14 N9 G A 580 -4.121 98.368 103.134 1.00 43.62 N
ATOM 15 C8 G A 580 -5.406 98.821 103.343 1.00 43.52 C
ATOM 16 N7 G A 580 -6.317 97.967 102.962 1.00 43.64 N
ATOM 17 C5 G A 580 -5.594 96.883 102.484 1.00 41.76 C
ATOM 18 C6 G A 580 -6.040 95.670 101.929 1.00 40.79 C
ATOM 19 O6 G A 580 -7.203 95.295 101.739 1.00 44.49 O
ATOM 20 N1 G A 580 -4.976 94.848 101.573 1.00 39.95 N
ATOM 21 C2 G A 580 -3.646 95.159 101.736 1.00 41.28 C
ATOM 22 N2 G A 580 -2.755 94.223 101.340 1.00 39.80 N
ATOM 23 N3 G A 580 -3.217 96.298 102.251 1.00 40.58 N
ATOM 24 C4 G A 580 -4.237 97.107 102.599 1.00 41.77 C
ATOM 25 P A A 581 -2.742 103.652 101.354 1.00 49.96 P
ATOM 26 OP1 A A 581 -2.622 104.610 102.491 1.00 46.64 O
ATOM 27 OP2 A A 581 -4.065 103.439 100.716 1.00 48.64 O
ATOM 28 O5' A A 581 -1.724 104.110 100.217 1.00 49.59 O
TER
ATOM 1 O3' G B 552 -5.919 93.501 97.207 1.00 46.41 O
ATOM 2 P A B 553 -5.404 92.592 98.432 1.00 48.25 P
ATOM 3 OP1 A B 553 -5.962 91.230 98.235 1.00 45.85 O
ATOM 4 OP2 A B 553 -5.602 93.294 99.729 1.00 43.95 O
ATOM 5 O5' A B 553 -3.839 92.473 98.142 1.00 48.44 O
ATOM 6 C5' A B 553 -3.372 91.763 96.967 1.00 46.78 C
ATOM 7 C4' A B 553 -1.879 91.926 96.796 1.00 44.65 C
ATOM 8 O4' A B 553 -1.551 93.280 96.390 1.00 45.41 O
ATOM 9 C3' A B 553 -1.042 91.727 98.044 1.00 44.10 C
ATOM 10 O3' A B 553 -0.880 90.345 98.335 1.00 43.42 O
ATOM 11 C2' A B 553 0.263 92.412 97.661 1.00 41.42 C
ATOM 12 O2' A B 553 1.035 91.600 96.799 1.00 41.02 O
ATOM 13 C1' A B 553 -0.253 93.611 96.862 1.00 40.92 C
ATOM 14 N9 A B 553 -0.333 94.869 97.605 1.00 40.13 N
ATOM 15 C8 A B 553 -1.445 95.475 98.125 1.00 38.69 C
ATOM 16 N7 A B 553 -1.198 96.627 98.706 1.00 40.04 N
ATOM 17 C5 A B 553 0.173 96.788 98.564 1.00 38.31 C
ATOM 18 C6 A B 553 1.056 97.815 98.956 1.00 37.73 C
ATOM 19 N6 A B 553 0.675 98.923 99.593 1.00 38.84 N
ATOM 20 N1 A B 553 2.362 97.666 98.664 1.00 38.08 N
ATOM 21 C2 A B 553 2.751 96.559 98.019 1.00 39.46 C
ATOM 22 N3 A B 553 2.020 95.529 97.592 1.00 40.50 N
ATOM 23 C4 A B 553 0.722 95.707 97.899 1.00 39.77 C
ATOM 24 P A B 554 -0.944 89.850 99.862 1.00 42.20 P
ATOM 25 OP1 A B 554 -1.168 88.370 99.835 1.00 38.87 O
ATOM 26 OP2 A B 554 -1.876 90.738 100.622 1.00 39.30 O
ATOM 27 O5' A B 554 0.515 90.148 100.428 1.00 42.00 O
TER
ATOM 2 P G A 580 -6.469 102.788 104.592 1.00 48.43 P
ATOM 3 OP1 G A 580 -6.204 104.247 104.505 1.00 49.24 O
ATOM 4 OP2 G A 580 -7.643 102.207 103.881 1.00 49.55 O
ATOM 5 O5' G A 580 -5.183 101.979 104.108 1.00 47.99 O
ATOM 6 C5' G A 580 -3.857 102.310 104.578 1.00 44.65 C
ATOM 7 C4' G A 580 -2.853 101.366 103.964 1.00 44.96 C
ATOM 8 O4' G A 580 -3.107 100.018 104.440 1.00 44.36 O
ATOM 9 C3' G A 580 -2.941 101.266 102.450 1.00 45.74 C
ATOM 10 O3' G A 580 -2.118 102.249 101.835 1.00 47.64 O
ATOM 11 C2' G A 580 -2.388 99.874 102.169 1.00 45.23 C
ATOM 12 O2' G A 580 -0.979 99.852 102.106 1.00 48.37 O
ATOM 13 C1' G A 580 -2.878 99.088 103.392 1.00 44.38 C
ATOM 14 N9 G A 580 -4.121 98.368 103.134 1.00 43.62 N
ATOM 15 C8 G A 580 -5.406 98.821 103.343 1.00 43.52 C
ATOM 16 N7 G A 580 -6.317 97.967 102.962 1.00 43.64 N
ATOM 17 C5 G A 580 -5.594 96.883 102.484 1.00 41.76 C
ATOM 18 C6 G A 580 -6.040 95.670 101.929 1.00 40.79 C
ATOM 19 O6 G A 580 -7.203 95.295 101.739 1.00 44.49 O
ATOM 20 N1 G A 580 -4.976 94.848 101.573 1.00 39.95 N
ATOM 21 C2 G A 580 -3.646 95.159 101.736 1.00 41.28 C
ATOM 22 N2 G A 580 -2.755 94.223 101.340 1.00 39.80 N
ATOM 23 N3 G A 580 -3.217 96.298 102.251 1.00 40.58 N
ATOM 24 C4 G A 580 -4.237 97.107 102.599 1.00 41.77 C
ATOM 25 P A A 581 -2.742 103.652 101.354 1.00 49.96 P
ATOM 26 OP1 A A 581 -2.622 104.610 102.491 1.00 46.64 O
ATOM 27 OP2 A A 581 -4.065 103.439 100.716 1.00 48.64 O
ATOM 28 O5' A A 581 -1.724 104.110 100.217 1.00 49.59 O
TER
ATOM 1 O3' G B 552 -5.919 93.501 97.207 1.00 46.41 O
ATOM 2 P A B 553 -5.404 92.592 98.432 1.00 48.25 P
ATOM 3 OP1 A B 553 -5.962 91.230 98.235 1.00 45.85 O
ATOM 4 OP2 A B 553 -5.602 93.294 99.729 1.00 43.95 O
ATOM 5 O5' A B 553 -3.839 92.473 98.142 1.00 48.44 O
ATOM 6 C5' A B 553 -3.372 91.763 96.967 1.00 46.78 C
ATOM 7 C4' A B 553 -1.879 91.926 96.796 1.00 44.65 C
ATOM 8 O4' A B 553 -1.551 93.280 96.390 1.00 45.41 O
ATOM 9 C3' A B 553 -1.042 91.727 98.044 1.00 44.10 C
ATOM 10 O3' A B 553 -0.880 90.345 98.335 1.00 43.42 O
ATOM 11 C2' A B 553 0.263 92.412 97.661 1.00 41.42 C
ATOM 12 O2' A B 553 1.035 91.600 96.799 1.00 41.02 O
ATOM 13 C1' A B 553 -0.253 93.611 96.862 1.00 40.92 C
ATOM 14 N9 A B 553 -0.333 94.869 97.605 1.00 40.13 N
ATOM 15 C8 A B 553 -1.445 95.475 98.125 1.00 38.69 C
ATOM 16 N7 A B 553 -1.198 96.627 98.706 1.00 40.04 N
ATOM 17 C5 A B 553 0.173 96.788 98.564 1.00 38.31 C
ATOM 18 C6 A B 553 1.056 97.815 98.956 1.00 37.73 C
ATOM 19 N6 A B 553 0.675 98.923 99.593 1.00 38.84 N
ATOM 20 N1 A B 553 2.362 97.666 98.664 1.00 38.08 N
ATOM 21 C2 A B 553 2.751 96.559 98.019 1.00 39.46 C
ATOM 22 N3 A B 553 2.020 95.529 97.592 1.00 40.50 N
ATOM 23 C4 A B 553 0.722 95.707 97.899 1.00 39.77 C
ATOM 24 P A B 554 -0.944 89.850 99.862 1.00 42.20 P
ATOM 25 OP1 A B 554 -1.168 88.370 99.835 1.00 38.87 O
ATOM 26 OP2 A B 554 -1.876 90.738 100.622 1.00 39.30 O
ATOM 27 O5' A B 554 0.515 90.148 100.428 1.00 42.00 O
TER
Atoms:
OP1: (-6.204,104.247,104.505)
OP2: (-7.643,102.207,103.881)
C3': (-2.941,101.266,102.450)
C1': (-2.878,99.088,103.392)
C5': (-3.857,102.310,104.578)
O6: (-7.203,95.295,101.739)
O4': (-3.107,100.018,104.440)
C8: (-5.406,98.821,103.343)
C2: (-3.646,95.159,101.736)
C6: (-6.040,95.670,101.929)
C5: (-5.594,96.883,102.484)
C4: (-4.237,97.107,102.599)
P: (-6.469,102.788,104.592)
C4': (-2.853,101.366,103.964)
C2': (-2.388,99.874,102.169)
O2': (-0.979,99.852,102.106)
N1: (-4.976,94.848,101.573)
N2: (-2.755,94.223,101.340)
N3: (-3.217,96.298,102.251)
N7: (-6.317,97.967,102.962)
N9: (-4.121,98.368,103.134)
O5': (-5.183,101.979,104.108)
O3': (-2.118,102.249,101.835)
OP2: (-7.643,102.207,103.881)
C3': (-2.941,101.266,102.450)
C1': (-2.878,99.088,103.392)
C5': (-3.857,102.310,104.578)
O6: (-7.203,95.295,101.739)
O4': (-3.107,100.018,104.440)
C8: (-5.406,98.821,103.343)
C2: (-3.646,95.159,101.736)
C6: (-6.040,95.670,101.929)
C5: (-5.594,96.883,102.484)
C4: (-4.237,97.107,102.599)
P: (-6.469,102.788,104.592)
C4': (-2.853,101.366,103.964)
C2': (-2.388,99.874,102.169)
O2': (-0.979,99.852,102.106)
N1: (-4.976,94.848,101.573)
N2: (-2.755,94.223,101.340)
N3: (-3.217,96.298,102.251)
N7: (-6.317,97.967,102.962)
N9: (-4.121,98.368,103.134)
O5': (-5.183,101.979,104.108)
O3': (-2.118,102.249,101.835)
OP1: (-5.962,91.230,98.235)
OP2: (-5.602,93.294,99.729)
C3': (-1.042,91.727,98.044)
C1': (-0.253,93.611,96.862)
C5': (-3.372,91.763,96.967)
O4': (-1.551,93.280,96.390)
C8: (-1.445,95.475,98.125)
O2': (1.035,91.600,96.799)
C6: (1.056,97.815,98.956)
C5: (0.173,96.788,98.564)
C4: (0.722,95.707,97.899)
P: (-5.404,92.592,98.432)
C4': (-1.879,91.926,96.796)
C2': (0.263,92.412,97.661)
C2: (2.751,96.559,98.019)
N1: (2.362,97.666,98.664)
N3: (2.020,95.529,97.592)
N6: (0.675,98.923,99.593)
N7: (-1.198,96.627,98.706)
N9: (-0.333,94.869,97.605)
O5': (-3.839,92.473,98.142)
O3': (-0.880,90.345,98.335)
OP2: (-5.602,93.294,99.729)
C3': (-1.042,91.727,98.044)
C1': (-0.253,93.611,96.862)
C5': (-3.372,91.763,96.967)
O4': (-1.551,93.280,96.390)
C8: (-1.445,95.475,98.125)
O2': (1.035,91.600,96.799)
C6: (1.056,97.815,98.956)
C5: (0.173,96.788,98.564)
C4: (0.722,95.707,97.899)
P: (-5.404,92.592,98.432)
C4': (-1.879,91.926,96.796)
C2': (0.263,92.412,97.661)
C2: (2.751,96.559,98.019)
N1: (2.362,97.666,98.664)
N3: (2.020,95.529,97.592)
N6: (0.675,98.923,99.593)
N7: (-1.198,96.627,98.706)
N9: (-0.333,94.869,97.605)
O5': (-3.839,92.473,98.142)
O3': (-0.880,90.345,98.335)
Image (generated by PyMOL):