Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02513:02650
Extra
PDB:
ATOM 1 O3' U A2512 28.645 145.605 139.407 1.00 48.97 O
ATOM 2 P G A2513 29.825 144.569 139.757 1.00 50.12 P
ATOM 3 OP1 G A2513 29.370 143.723 140.889 1.00 50.58 O
ATOM 4 OP2 G A2513 31.099 145.323 139.872 1.00 48.15 O
ATOM 5 O5' G A2513 29.907 143.644 138.468 1.00 51.67 O
ATOM 6 C5' G A2513 28.794 142.823 138.065 1.00 51.28 C
ATOM 7 C4' G A2513 29.168 142.019 136.839 1.00 51.32 C
ATOM 8 O4' G A2513 29.330 142.919 135.702 1.00 49.78 O
ATOM 9 C3' G A2513 30.486 141.264 136.969 1.00 50.16 C
ATOM 10 O3' G A2513 30.434 140.054 136.237 1.00 51.57 O
ATOM 11 C2' G A2513 31.480 142.231 136.338 1.00 49.81 C
ATOM 12 O2' G A2513 32.668 141.626 135.871 1.00 48.03 O
ATOM 13 C1' G A2513 30.644 142.810 135.197 1.00 49.55 C
ATOM 14 N9 G A2513 31.088 144.127 134.745 1.00 49.56 N
ATOM 15 C8 G A2513 31.658 145.122 135.505 1.00 47.86 C
ATOM 16 N7 G A2513 32.010 146.165 134.804 1.00 48.02 N
ATOM 17 C5 G A2513 31.642 145.847 133.503 1.00 48.74 C
ATOM 18 C6 G A2513 31.794 146.581 132.302 1.00 48.52 C
ATOM 19 O6 G A2513 32.319 147.689 132.138 1.00 49.84 O
ATOM 20 N1 G A2513 31.271 145.895 131.212 1.00 48.24 N
ATOM 21 C2 G A2513 30.684 144.657 131.264 1.00 48.17 C
ATOM 22 N2 G A2513 30.226 144.169 130.098 1.00 43.09 N
ATOM 23 N3 G A2513 30.552 143.951 132.377 1.00 49.08 N
ATOM 24 C4 G A2513 31.051 144.602 133.451 1.00 49.29 C
ATOM 25 P A A2514 31.271 138.782 136.748 1.00 54.68 P
ATOM 26 OP1 A A2514 30.647 138.323 138.021 1.00 56.27 O
ATOM 27 OP2 A A2514 32.718 139.115 136.723 1.00 53.12 O
ATOM 28 O5' A A2514 30.973 137.682 135.638 1.00 52.57 O
TER
ATOM 1 O3' G B2649 33.174 146.698 126.722 1.00 51.10 O
ATOM 2 P A B2650 31.962 147.660 127.159 1.00 54.95 P
ATOM 3 OP1 A B2650 32.481 149.051 127.290 1.00 54.72 O
ATOM 4 OP2 A B2650 31.260 147.026 128.314 1.00 51.44 O
ATOM 5 O5' A B2650 31.017 147.599 125.882 1.00 50.18 O
ATOM 6 C5' A B2650 29.796 148.330 125.825 1.00 46.59 C
ATOM 7 C4' A B2650 28.690 147.424 125.359 1.00 45.83 C
ATOM 8 O4' A B2650 28.513 146.364 126.338 1.00 44.64 O
ATOM 9 C3' A B2650 27.331 148.098 125.208 1.00 46.14 C
ATOM 10 O3' A B2650 26.549 147.436 124.211 1.00 46.57 O
ATOM 11 C2' A B2650 26.693 147.820 126.561 1.00 45.60 C
ATOM 12 O2' A B2650 25.283 147.859 126.523 1.00 47.15 O
ATOM 13 C1' A B2650 27.191 146.401 126.826 1.00 45.09 C
ATOM 14 N9 A B2650 27.190 146.032 128.240 1.00 45.05 N
ATOM 15 C8 A B2650 27.785 146.670 129.301 1.00 44.24 C
ATOM 16 N7 A B2650 27.509 146.126 130.463 1.00 44.84 N
ATOM 17 C5 A B2650 26.693 145.049 130.144 1.00 44.00 C
ATOM 18 C6 A B2650 26.039 144.090 130.934 1.00 44.23 C
ATOM 19 N6 A B2650 26.089 144.069 132.264 1.00 45.77 N
ATOM 20 N1 A B2650 25.314 143.147 130.302 1.00 44.83 N
ATOM 21 C2 A B2650 25.248 143.177 128.966 1.00 45.45 C
ATOM 22 N3 A B2650 25.802 144.032 128.116 1.00 44.11 N
ATOM 23 C4 A B2650 26.516 144.960 128.777 1.00 44.71 C
ATOM 24 P A B2651 27.053 147.372 122.685 1.00 45.60 P
ATOM 25 OP1 A B2651 28.084 148.419 122.474 1.00 44.56 O
ATOM 26 OP2 A B2651 25.852 147.348 121.832 1.00 47.32 O
ATOM 27 O5' A B2651 27.714 145.928 122.580 1.00 45.20 O
TER
ATOM 2 P G A2513 29.825 144.569 139.757 1.00 50.12 P
ATOM 3 OP1 G A2513 29.370 143.723 140.889 1.00 50.58 O
ATOM 4 OP2 G A2513 31.099 145.323 139.872 1.00 48.15 O
ATOM 5 O5' G A2513 29.907 143.644 138.468 1.00 51.67 O
ATOM 6 C5' G A2513 28.794 142.823 138.065 1.00 51.28 C
ATOM 7 C4' G A2513 29.168 142.019 136.839 1.00 51.32 C
ATOM 8 O4' G A2513 29.330 142.919 135.702 1.00 49.78 O
ATOM 9 C3' G A2513 30.486 141.264 136.969 1.00 50.16 C
ATOM 10 O3' G A2513 30.434 140.054 136.237 1.00 51.57 O
ATOM 11 C2' G A2513 31.480 142.231 136.338 1.00 49.81 C
ATOM 12 O2' G A2513 32.668 141.626 135.871 1.00 48.03 O
ATOM 13 C1' G A2513 30.644 142.810 135.197 1.00 49.55 C
ATOM 14 N9 G A2513 31.088 144.127 134.745 1.00 49.56 N
ATOM 15 C8 G A2513 31.658 145.122 135.505 1.00 47.86 C
ATOM 16 N7 G A2513 32.010 146.165 134.804 1.00 48.02 N
ATOM 17 C5 G A2513 31.642 145.847 133.503 1.00 48.74 C
ATOM 18 C6 G A2513 31.794 146.581 132.302 1.00 48.52 C
ATOM 19 O6 G A2513 32.319 147.689 132.138 1.00 49.84 O
ATOM 20 N1 G A2513 31.271 145.895 131.212 1.00 48.24 N
ATOM 21 C2 G A2513 30.684 144.657 131.264 1.00 48.17 C
ATOM 22 N2 G A2513 30.226 144.169 130.098 1.00 43.09 N
ATOM 23 N3 G A2513 30.552 143.951 132.377 1.00 49.08 N
ATOM 24 C4 G A2513 31.051 144.602 133.451 1.00 49.29 C
ATOM 25 P A A2514 31.271 138.782 136.748 1.00 54.68 P
ATOM 26 OP1 A A2514 30.647 138.323 138.021 1.00 56.27 O
ATOM 27 OP2 A A2514 32.718 139.115 136.723 1.00 53.12 O
ATOM 28 O5' A A2514 30.973 137.682 135.638 1.00 52.57 O
TER
ATOM 1 O3' G B2649 33.174 146.698 126.722 1.00 51.10 O
ATOM 2 P A B2650 31.962 147.660 127.159 1.00 54.95 P
ATOM 3 OP1 A B2650 32.481 149.051 127.290 1.00 54.72 O
ATOM 4 OP2 A B2650 31.260 147.026 128.314 1.00 51.44 O
ATOM 5 O5' A B2650 31.017 147.599 125.882 1.00 50.18 O
ATOM 6 C5' A B2650 29.796 148.330 125.825 1.00 46.59 C
ATOM 7 C4' A B2650 28.690 147.424 125.359 1.00 45.83 C
ATOM 8 O4' A B2650 28.513 146.364 126.338 1.00 44.64 O
ATOM 9 C3' A B2650 27.331 148.098 125.208 1.00 46.14 C
ATOM 10 O3' A B2650 26.549 147.436 124.211 1.00 46.57 O
ATOM 11 C2' A B2650 26.693 147.820 126.561 1.00 45.60 C
ATOM 12 O2' A B2650 25.283 147.859 126.523 1.00 47.15 O
ATOM 13 C1' A B2650 27.191 146.401 126.826 1.00 45.09 C
ATOM 14 N9 A B2650 27.190 146.032 128.240 1.00 45.05 N
ATOM 15 C8 A B2650 27.785 146.670 129.301 1.00 44.24 C
ATOM 16 N7 A B2650 27.509 146.126 130.463 1.00 44.84 N
ATOM 17 C5 A B2650 26.693 145.049 130.144 1.00 44.00 C
ATOM 18 C6 A B2650 26.039 144.090 130.934 1.00 44.23 C
ATOM 19 N6 A B2650 26.089 144.069 132.264 1.00 45.77 N
ATOM 20 N1 A B2650 25.314 143.147 130.302 1.00 44.83 N
ATOM 21 C2 A B2650 25.248 143.177 128.966 1.00 45.45 C
ATOM 22 N3 A B2650 25.802 144.032 128.116 1.00 44.11 N
ATOM 23 C4 A B2650 26.516 144.960 128.777 1.00 44.71 C
ATOM 24 P A B2651 27.053 147.372 122.685 1.00 45.60 P
ATOM 25 OP1 A B2651 28.084 148.419 122.474 1.00 44.56 O
ATOM 26 OP2 A B2651 25.852 147.348 121.832 1.00 47.32 O
ATOM 27 O5' A B2651 27.714 145.928 122.580 1.00 45.20 O
TER
Atoms:
OP1: (29.370,143.723,140.889)
OP2: (31.099,145.323,139.872)
C3': (30.486,141.264,136.969)
C1': (30.644,142.810,135.197)
C5': (28.794,142.823,138.065)
O6: (32.319,147.689,132.138)
O4': (29.330,142.919,135.702)
C8: (31.658,145.122,135.505)
C2: (30.684,144.657,131.264)
C6: (31.794,146.581,132.302)
C5: (31.642,145.847,133.503)
C4: (31.051,144.602,133.451)
P: (29.825,144.569,139.757)
C4': (29.168,142.019,136.839)
C2': (31.480,142.231,136.338)
O2': (32.668,141.626,135.871)
N1: (31.271,145.895,131.212)
N2: (30.226,144.169,130.098)
N3: (30.552,143.951,132.377)
N7: (32.010,146.165,134.804)
N9: (31.088,144.127,134.745)
O5': (29.907,143.644,138.468)
O3': (30.434,140.054,136.237)
OP2: (31.099,145.323,139.872)
C3': (30.486,141.264,136.969)
C1': (30.644,142.810,135.197)
C5': (28.794,142.823,138.065)
O6: (32.319,147.689,132.138)
O4': (29.330,142.919,135.702)
C8: (31.658,145.122,135.505)
C2: (30.684,144.657,131.264)
C6: (31.794,146.581,132.302)
C5: (31.642,145.847,133.503)
C4: (31.051,144.602,133.451)
P: (29.825,144.569,139.757)
C4': (29.168,142.019,136.839)
C2': (31.480,142.231,136.338)
O2': (32.668,141.626,135.871)
N1: (31.271,145.895,131.212)
N2: (30.226,144.169,130.098)
N3: (30.552,143.951,132.377)
N7: (32.010,146.165,134.804)
N9: (31.088,144.127,134.745)
O5': (29.907,143.644,138.468)
O3': (30.434,140.054,136.237)
OP1: (32.481,149.051,127.290)
OP2: (31.260,147.026,128.314)
C3': (27.331,148.098,125.208)
C1': (27.191,146.401,126.826)
C5': (29.796,148.330,125.825)
O4': (28.513,146.364,126.338)
C8: (27.785,146.670,129.301)
O2': (25.283,147.859,126.523)
C6: (26.039,144.090,130.934)
C5: (26.693,145.049,130.144)
C4: (26.516,144.960,128.777)
P: (31.962,147.660,127.159)
C4': (28.690,147.424,125.359)
C2': (26.693,147.820,126.561)
C2: (25.248,143.177,128.966)
N1: (25.314,143.147,130.302)
N3: (25.802,144.032,128.116)
N6: (26.089,144.069,132.264)
N7: (27.509,146.126,130.463)
N9: (27.190,146.032,128.240)
O5': (31.017,147.599,125.882)
O3': (26.549,147.436,124.211)
OP2: (31.260,147.026,128.314)
C3': (27.331,148.098,125.208)
C1': (27.191,146.401,126.826)
C5': (29.796,148.330,125.825)
O4': (28.513,146.364,126.338)
C8: (27.785,146.670,129.301)
O2': (25.283,147.859,126.523)
C6: (26.039,144.090,130.934)
C5: (26.693,145.049,130.144)
C4: (26.516,144.960,128.777)
P: (31.962,147.660,127.159)
C4': (28.690,147.424,125.359)
C2': (26.693,147.820,126.561)
C2: (25.248,143.177,128.966)
N1: (25.314,143.147,130.302)
N3: (25.802,144.032,128.116)
N6: (26.089,144.069,132.264)
N7: (27.509,146.126,130.463)
N9: (27.190,146.032,128.240)
O5': (31.017,147.599,125.882)
O3': (26.549,147.436,124.211)
Image (generated by PyMOL):