Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1800:1780
Extra
PDB:
ATOM 1 O3' U A 799 -14.304 41.444 116.867 1.00 57.60 O
ATOM 2 P G A 800 -12.789 41.314 116.337 1.00 60.28 P
ATOM 3 OP1 G A 800 -11.919 42.000 117.329 1.00 60.62 O
ATOM 4 OP2 G A 800 -12.761 41.786 114.921 1.00 60.02 O
ATOM 5 O5' G A 800 -12.528 39.746 116.382 1.00 59.69 O
ATOM 6 C5' G A 800 -12.432 39.062 117.614 1.00 59.81 C
ATOM 7 C4' G A 800 -12.749 37.611 117.441 1.00 59.34 C
ATOM 8 O4' G A 800 -13.963 37.485 116.676 1.00 59.36 O
ATOM 9 C3' G A 800 -11.711 36.778 116.684 1.00 58.61 C
ATOM 10 O3' G A 800 -10.712 36.252 117.558 1.00 58.48 O
ATOM 11 C2' G A 800 -12.553 35.678 116.030 1.00 58.25 C
ATOM 12 O2' G A 800 -12.742 34.601 116.937 1.00 58.23 O
ATOM 13 C1' G A 800 -13.907 36.362 115.832 1.00 58.73 C
ATOM 14 N9 G A 800 -14.148 36.810 114.449 1.00 58.53 N
ATOM 15 C8 G A 800 -13.995 38.097 114.015 1.00 58.79 C
ATOM 16 N7 G A 800 -14.314 38.260 112.771 1.00 58.58 N
ATOM 17 C5 G A 800 -14.742 36.995 112.362 1.00 58.16 C
ATOM 18 C6 G A 800 -15.227 36.552 111.094 1.00 57.80 C
ATOM 19 O6 G A 800 -15.367 37.224 110.056 1.00 57.78 O
ATOM 20 N1 G A 800 -15.536 35.180 111.115 1.00 57.45 N
ATOM 21 C2 G A 800 -15.408 34.346 112.214 1.00 57.45 C
ATOM 22 N2 G A 800 -15.746 33.057 112.075 1.00 57.10 N
ATOM 23 N3 G A 800 -14.964 34.775 113.390 1.00 57.79 N
ATOM 24 C4 G A 800 -14.649 36.092 113.397 1.00 58.13 C
ATOM 25 P G A 801 -9.178 36.697 117.432 1.00 53.57 P
ATOM 26 OP1 G A 801 -8.582 36.636 118.789 1.00 53.84 O
ATOM 27 OP2 G A 801 -9.163 37.976 116.707 1.00 53.76 O
ATOM 28 O5' G A 801 -8.551 35.562 116.525 1.00 52.80 O
TER
ATOM 1 O3' G B 779 -14.463 32.933 106.828 1.00 51.59 O
ATOM 2 P A B 780 -15.818 32.739 107.669 1.00 51.61 P
ATOM 3 OP1 A B 780 -16.948 33.051 106.754 1.00 51.78 O
ATOM 4 OP2 A B 780 -15.715 33.507 108.943 1.00 52.13 O
ATOM 5 O5' A B 780 -15.769 31.186 107.979 1.00 51.22 O
ATOM 6 C5' A B 780 -15.928 30.214 106.955 1.00 50.75 C
ATOM 7 C4' A B 780 -15.640 28.858 107.511 1.00 50.43 C
ATOM 8 O4' A B 780 -14.216 28.735 107.710 1.00 50.10 O
ATOM 9 C3' A B 780 -16.246 28.610 108.880 1.00 50.84 C
ATOM 10 O3' A B 780 -17.562 28.065 108.804 1.00 51.01 O
ATOM 11 C2' A B 780 -15.222 27.722 109.573 1.00 50.52 C
ATOM 12 O2' A B 780 -15.350 26.382 109.153 1.00 50.10 O
ATOM 13 C1' A B 780 -13.932 28.266 108.995 1.00 50.21 C
ATOM 14 N9 A B 780 -13.395 29.388 109.786 1.00 50.59 N
ATOM 15 C8 A B 780 -13.126 30.657 109.369 1.00 50.77 C
ATOM 16 N7 A B 780 -12.639 31.418 110.287 1.00 51.11 N
ATOM 17 C5 A B 780 -12.585 30.614 111.387 1.00 51.15 C
ATOM 18 C6 A B 780 -12.185 30.864 112.686 1.00 51.48 C
ATOM 19 N6 A B 780 -11.750 32.042 113.084 1.00 51.83 N
ATOM 20 N1 A B 780 -12.224 29.878 113.580 1.00 51.45 N
ATOM 21 C2 A B 780 -12.682 28.707 113.139 1.00 51.12 C
ATOM 22 N3 A B 780 -13.127 28.324 111.943 1.00 50.79 N
ATOM 23 C4 A B 780 -13.037 29.359 111.102 1.00 50.83 C
ATOM 24 P A B 781 -18.647 28.343 109.971 1.00 53.22 P
ATOM 25 OP1 A B 781 -19.976 28.109 109.373 1.00 53.36 O
ATOM 26 OP2 A B 781 -18.363 29.673 110.549 1.00 53.66 O
ATOM 27 O5' A B 781 -18.305 27.208 111.028 1.00 53.10 O
TER
ATOM 2 P G A 800 -12.789 41.314 116.337 1.00 60.28 P
ATOM 3 OP1 G A 800 -11.919 42.000 117.329 1.00 60.62 O
ATOM 4 OP2 G A 800 -12.761 41.786 114.921 1.00 60.02 O
ATOM 5 O5' G A 800 -12.528 39.746 116.382 1.00 59.69 O
ATOM 6 C5' G A 800 -12.432 39.062 117.614 1.00 59.81 C
ATOM 7 C4' G A 800 -12.749 37.611 117.441 1.00 59.34 C
ATOM 8 O4' G A 800 -13.963 37.485 116.676 1.00 59.36 O
ATOM 9 C3' G A 800 -11.711 36.778 116.684 1.00 58.61 C
ATOM 10 O3' G A 800 -10.712 36.252 117.558 1.00 58.48 O
ATOM 11 C2' G A 800 -12.553 35.678 116.030 1.00 58.25 C
ATOM 12 O2' G A 800 -12.742 34.601 116.937 1.00 58.23 O
ATOM 13 C1' G A 800 -13.907 36.362 115.832 1.00 58.73 C
ATOM 14 N9 G A 800 -14.148 36.810 114.449 1.00 58.53 N
ATOM 15 C8 G A 800 -13.995 38.097 114.015 1.00 58.79 C
ATOM 16 N7 G A 800 -14.314 38.260 112.771 1.00 58.58 N
ATOM 17 C5 G A 800 -14.742 36.995 112.362 1.00 58.16 C
ATOM 18 C6 G A 800 -15.227 36.552 111.094 1.00 57.80 C
ATOM 19 O6 G A 800 -15.367 37.224 110.056 1.00 57.78 O
ATOM 20 N1 G A 800 -15.536 35.180 111.115 1.00 57.45 N
ATOM 21 C2 G A 800 -15.408 34.346 112.214 1.00 57.45 C
ATOM 22 N2 G A 800 -15.746 33.057 112.075 1.00 57.10 N
ATOM 23 N3 G A 800 -14.964 34.775 113.390 1.00 57.79 N
ATOM 24 C4 G A 800 -14.649 36.092 113.397 1.00 58.13 C
ATOM 25 P G A 801 -9.178 36.697 117.432 1.00 53.57 P
ATOM 26 OP1 G A 801 -8.582 36.636 118.789 1.00 53.84 O
ATOM 27 OP2 G A 801 -9.163 37.976 116.707 1.00 53.76 O
ATOM 28 O5' G A 801 -8.551 35.562 116.525 1.00 52.80 O
TER
ATOM 1 O3' G B 779 -14.463 32.933 106.828 1.00 51.59 O
ATOM 2 P A B 780 -15.818 32.739 107.669 1.00 51.61 P
ATOM 3 OP1 A B 780 -16.948 33.051 106.754 1.00 51.78 O
ATOM 4 OP2 A B 780 -15.715 33.507 108.943 1.00 52.13 O
ATOM 5 O5' A B 780 -15.769 31.186 107.979 1.00 51.22 O
ATOM 6 C5' A B 780 -15.928 30.214 106.955 1.00 50.75 C
ATOM 7 C4' A B 780 -15.640 28.858 107.511 1.00 50.43 C
ATOM 8 O4' A B 780 -14.216 28.735 107.710 1.00 50.10 O
ATOM 9 C3' A B 780 -16.246 28.610 108.880 1.00 50.84 C
ATOM 10 O3' A B 780 -17.562 28.065 108.804 1.00 51.01 O
ATOM 11 C2' A B 780 -15.222 27.722 109.573 1.00 50.52 C
ATOM 12 O2' A B 780 -15.350 26.382 109.153 1.00 50.10 O
ATOM 13 C1' A B 780 -13.932 28.266 108.995 1.00 50.21 C
ATOM 14 N9 A B 780 -13.395 29.388 109.786 1.00 50.59 N
ATOM 15 C8 A B 780 -13.126 30.657 109.369 1.00 50.77 C
ATOM 16 N7 A B 780 -12.639 31.418 110.287 1.00 51.11 N
ATOM 17 C5 A B 780 -12.585 30.614 111.387 1.00 51.15 C
ATOM 18 C6 A B 780 -12.185 30.864 112.686 1.00 51.48 C
ATOM 19 N6 A B 780 -11.750 32.042 113.084 1.00 51.83 N
ATOM 20 N1 A B 780 -12.224 29.878 113.580 1.00 51.45 N
ATOM 21 C2 A B 780 -12.682 28.707 113.139 1.00 51.12 C
ATOM 22 N3 A B 780 -13.127 28.324 111.943 1.00 50.79 N
ATOM 23 C4 A B 780 -13.037 29.359 111.102 1.00 50.83 C
ATOM 24 P A B 781 -18.647 28.343 109.971 1.00 53.22 P
ATOM 25 OP1 A B 781 -19.976 28.109 109.373 1.00 53.36 O
ATOM 26 OP2 A B 781 -18.363 29.673 110.549 1.00 53.66 O
ATOM 27 O5' A B 781 -18.305 27.208 111.028 1.00 53.10 O
TER
Atoms:
OP1: (-11.919,42.000,117.329)
OP2: (-12.761,41.786,114.921)
C3': (-11.711,36.778,116.684)
C1': (-13.907,36.362,115.832)
C5': (-12.432,39.062,117.614)
O6: (-15.367,37.224,110.056)
O4': (-13.963,37.485,116.676)
C8: (-13.995,38.097,114.015)
C2: (-15.408,34.346,112.214)
C6: (-15.227,36.552,111.094)
C5: (-14.742,36.995,112.362)
C4: (-14.649,36.092,113.397)
P: (-12.789,41.314,116.337)
C4': (-12.749,37.611,117.441)
C2': (-12.553,35.678,116.030)
O2': (-12.742,34.601,116.937)
N1: (-15.536,35.180,111.115)
N2: (-15.746,33.057,112.075)
N3: (-14.964,34.775,113.390)
N7: (-14.314,38.260,112.771)
N9: (-14.148,36.810,114.449)
O5': (-12.528,39.746,116.382)
O3': (-10.712,36.252,117.558)
OP2: (-12.761,41.786,114.921)
C3': (-11.711,36.778,116.684)
C1': (-13.907,36.362,115.832)
C5': (-12.432,39.062,117.614)
O6: (-15.367,37.224,110.056)
O4': (-13.963,37.485,116.676)
C8: (-13.995,38.097,114.015)
C2: (-15.408,34.346,112.214)
C6: (-15.227,36.552,111.094)
C5: (-14.742,36.995,112.362)
C4: (-14.649,36.092,113.397)
P: (-12.789,41.314,116.337)
C4': (-12.749,37.611,117.441)
C2': (-12.553,35.678,116.030)
O2': (-12.742,34.601,116.937)
N1: (-15.536,35.180,111.115)
N2: (-15.746,33.057,112.075)
N3: (-14.964,34.775,113.390)
N7: (-14.314,38.260,112.771)
N9: (-14.148,36.810,114.449)
O5': (-12.528,39.746,116.382)
O3': (-10.712,36.252,117.558)
OP1: (-16.948,33.051,106.754)
OP2: (-15.715,33.507,108.943)
C3': (-16.246,28.610,108.880)
C1': (-13.932,28.266,108.995)
C5': (-15.928,30.214,106.955)
O4': (-14.216,28.735,107.710)
C8: (-13.126,30.657,109.369)
O2': (-15.350,26.382,109.153)
C6: (-12.185,30.864,112.686)
C5: (-12.585,30.614,111.387)
C4: (-13.037,29.359,111.102)
P: (-15.818,32.739,107.669)
C4': (-15.640,28.858,107.511)
C2': (-15.222,27.722,109.573)
C2: (-12.682,28.707,113.139)
N1: (-12.224,29.878,113.580)
N3: (-13.127,28.324,111.943)
N6: (-11.750,32.042,113.084)
N7: (-12.639,31.418,110.287)
N9: (-13.395,29.388,109.786)
O5': (-15.769,31.186,107.979)
O3': (-17.562,28.065,108.804)
OP2: (-15.715,33.507,108.943)
C3': (-16.246,28.610,108.880)
C1': (-13.932,28.266,108.995)
C5': (-15.928,30.214,106.955)
O4': (-14.216,28.735,107.710)
C8: (-13.126,30.657,109.369)
O2': (-15.350,26.382,109.153)
C6: (-12.185,30.864,112.686)
C5: (-12.585,30.614,111.387)
C4: (-13.037,29.359,111.102)
P: (-15.818,32.739,107.669)
C4': (-15.640,28.858,107.511)
C2': (-15.222,27.722,109.573)
C2: (-12.682,28.707,113.139)
N1: (-12.224,29.878,113.580)
N3: (-13.127,28.324,111.943)
N6: (-11.750,32.042,113.084)
N7: (-12.639,31.418,110.287)
N9: (-13.395,29.388,109.786)
O5': (-15.769,31.186,107.979)
O3': (-17.562,28.065,108.804)
Image (generated by PyMOL):