Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A116:A51
Extra
PDB:
ATOM 1 O3' C A 115 -28.321 -50.557 49.672 1.00 0.01 O
ATOM 2 P G A 116 -29.043 -49.549 50.700 1.00 0.01 P
ATOM 3 OP1 G A 116 -29.404 -48.352 49.922 1.00 0.01 O
ATOM 4 OP2 G A 116 -28.163 -49.392 51.868 1.00 0.01 O
ATOM 5 O5' G A 116 -30.351 -50.342 51.133 1.00 0.01 O
ATOM 6 C5' G A 116 -31.326 -50.707 50.185 1.00 0.01 C
ATOM 7 C4' G A 116 -32.308 -51.672 50.765 1.00 0.01 C
ATOM 8 O4' G A 116 -31.641 -52.903 51.083 1.00 0.01 O
ATOM 9 C3' G A 116 -32.944 -51.253 52.065 1.00 0.01 C
ATOM 10 O3' G A 116 -34.041 -50.406 51.884 1.00 0.01 O
ATOM 11 C2' G A 116 -33.323 -52.571 52.692 1.00 0.01 C
ATOM 12 O2' G A 116 -34.525 -53.068 52.139 1.00 0.01 O
ATOM 13 C1' G A 116 -32.177 -53.446 52.256 1.00 0.01 C
ATOM 14 N9 G A 116 -31.132 -53.466 53.267 1.00 0.02 N
ATOM 15 C8 G A 116 -30.147 -52.557 53.486 1.00 0.02 C
ATOM 16 N7 G A 116 -29.387 -52.891 54.506 1.00 0.02 N
ATOM 17 C5 G A 116 -29.925 -54.093 54.975 1.00 0.02 C
ATOM 18 C6 G A 116 -29.560 -54.967 56.034 1.00 0.02 C
ATOM 19 O6 G A 116 -28.647 -54.881 56.844 1.00 0.02 O
ATOM 20 N1 G A 116 -30.384 -56.051 56.134 1.00 0.02 N
ATOM 21 C2 G A 116 -31.432 -56.284 55.328 1.00 0.02 C
ATOM 22 N2 G A 116 -32.114 -57.383 55.585 1.00 0.02 N
ATOM 23 N3 G A 116 -31.797 -55.526 54.334 1.00 0.02 N
ATOM 24 C4 G A 116 -31.009 -54.444 54.216 1.00 0.02 C
ATOM 25 P A A 117 -33.975 -48.932 52.434 1.00 0.01 P
ATOM 26 OP1 A A 117 -34.995 -48.159 51.707 1.00 0.01 O
ATOM 27 OP2 A A 117 -32.570 -48.538 52.334 1.00 0.01 O
ATOM 28 O5' A A 117 -34.396 -49.071 53.948 1.00 0.01 O
TER
ATOM 1 O3' G B 50 -30.214 -56.721 60.355 1.00 0.01 O
ATOM 2 P A B 51 -30.179 -58.190 59.638 1.00 5.84 P
ATOM 3 OP1 A B 51 -29.295 -59.062 60.442 1.00 5.84 O
ATOM 4 OP2 A B 51 -29.854 -57.993 58.223 1.00 5.84 O
ATOM 5 O5' A B 51 -31.666 -58.691 59.766 1.00 5.84 O
ATOM 6 C5' A B 51 -32.096 -59.370 60.931 1.00 5.84 C
ATOM 7 C4' A B 51 -33.589 -59.482 60.965 1.00 5.84 C
ATOM 8 O4' A B 51 -34.161 -58.173 61.162 1.00 5.84 O
ATOM 9 C3' A B 51 -34.213 -60.012 59.701 1.00 5.84 C
ATOM 10 O3' A B 51 -34.348 -61.418 59.753 1.00 5.84 O
ATOM 11 C2' A B 51 -35.546 -59.265 59.612 1.00 5.84 C
ATOM 12 O2' A B 51 -36.540 -59.918 60.381 1.00 5.84 O
ATOM 13 C1' A B 51 -35.237 -57.960 60.302 1.00 5.84 C
ATOM 14 N9 A B 51 -34.872 -56.876 59.386 1.00 6.11 N
ATOM 15 C8 A B 51 -33.604 -56.395 59.184 1.00 6.11 C
ATOM 16 N7 A B 51 -33.551 -55.369 58.389 1.00 6.11 N
ATOM 17 C5 A B 51 -34.873 -55.126 58.086 1.00 6.11 C
ATOM 18 C6 A B 51 -35.490 -54.169 57.274 1.00 6.11 C
ATOM 19 N6 A B 51 -34.816 -53.230 56.597 1.00 6.11 N
ATOM 20 N1 A B 51 -36.838 -54.219 57.178 1.00 6.11 N
ATOM 21 C2 A B 51 -37.516 -55.145 57.848 1.00 6.11 C
ATOM 22 N3 A B 51 -37.042 -56.094 58.639 1.00 6.11 N
ATOM 23 C4 A B 51 -35.704 -56.031 58.714 1.00 6.11 C
ATOM 24 P A B 52 -34.039 -62.318 58.471 1.00 0.01 P
ATOM 25 OP1 A B 52 -33.999 -63.719 58.933 1.00 0.01 O
ATOM 26 OP2 A B 52 -32.834 -61.753 57.809 1.00 0.01 O
ATOM 27 O5' A B 52 -35.325 -62.087 57.563 1.00 0.01 O
TER
ATOM 2 P G A 116 -29.043 -49.549 50.700 1.00 0.01 P
ATOM 3 OP1 G A 116 -29.404 -48.352 49.922 1.00 0.01 O
ATOM 4 OP2 G A 116 -28.163 -49.392 51.868 1.00 0.01 O
ATOM 5 O5' G A 116 -30.351 -50.342 51.133 1.00 0.01 O
ATOM 6 C5' G A 116 -31.326 -50.707 50.185 1.00 0.01 C
ATOM 7 C4' G A 116 -32.308 -51.672 50.765 1.00 0.01 C
ATOM 8 O4' G A 116 -31.641 -52.903 51.083 1.00 0.01 O
ATOM 9 C3' G A 116 -32.944 -51.253 52.065 1.00 0.01 C
ATOM 10 O3' G A 116 -34.041 -50.406 51.884 1.00 0.01 O
ATOM 11 C2' G A 116 -33.323 -52.571 52.692 1.00 0.01 C
ATOM 12 O2' G A 116 -34.525 -53.068 52.139 1.00 0.01 O
ATOM 13 C1' G A 116 -32.177 -53.446 52.256 1.00 0.01 C
ATOM 14 N9 G A 116 -31.132 -53.466 53.267 1.00 0.02 N
ATOM 15 C8 G A 116 -30.147 -52.557 53.486 1.00 0.02 C
ATOM 16 N7 G A 116 -29.387 -52.891 54.506 1.00 0.02 N
ATOM 17 C5 G A 116 -29.925 -54.093 54.975 1.00 0.02 C
ATOM 18 C6 G A 116 -29.560 -54.967 56.034 1.00 0.02 C
ATOM 19 O6 G A 116 -28.647 -54.881 56.844 1.00 0.02 O
ATOM 20 N1 G A 116 -30.384 -56.051 56.134 1.00 0.02 N
ATOM 21 C2 G A 116 -31.432 -56.284 55.328 1.00 0.02 C
ATOM 22 N2 G A 116 -32.114 -57.383 55.585 1.00 0.02 N
ATOM 23 N3 G A 116 -31.797 -55.526 54.334 1.00 0.02 N
ATOM 24 C4 G A 116 -31.009 -54.444 54.216 1.00 0.02 C
ATOM 25 P A A 117 -33.975 -48.932 52.434 1.00 0.01 P
ATOM 26 OP1 A A 117 -34.995 -48.159 51.707 1.00 0.01 O
ATOM 27 OP2 A A 117 -32.570 -48.538 52.334 1.00 0.01 O
ATOM 28 O5' A A 117 -34.396 -49.071 53.948 1.00 0.01 O
TER
ATOM 1 O3' G B 50 -30.214 -56.721 60.355 1.00 0.01 O
ATOM 2 P A B 51 -30.179 -58.190 59.638 1.00 5.84 P
ATOM 3 OP1 A B 51 -29.295 -59.062 60.442 1.00 5.84 O
ATOM 4 OP2 A B 51 -29.854 -57.993 58.223 1.00 5.84 O
ATOM 5 O5' A B 51 -31.666 -58.691 59.766 1.00 5.84 O
ATOM 6 C5' A B 51 -32.096 -59.370 60.931 1.00 5.84 C
ATOM 7 C4' A B 51 -33.589 -59.482 60.965 1.00 5.84 C
ATOM 8 O4' A B 51 -34.161 -58.173 61.162 1.00 5.84 O
ATOM 9 C3' A B 51 -34.213 -60.012 59.701 1.00 5.84 C
ATOM 10 O3' A B 51 -34.348 -61.418 59.753 1.00 5.84 O
ATOM 11 C2' A B 51 -35.546 -59.265 59.612 1.00 5.84 C
ATOM 12 O2' A B 51 -36.540 -59.918 60.381 1.00 5.84 O
ATOM 13 C1' A B 51 -35.237 -57.960 60.302 1.00 5.84 C
ATOM 14 N9 A B 51 -34.872 -56.876 59.386 1.00 6.11 N
ATOM 15 C8 A B 51 -33.604 -56.395 59.184 1.00 6.11 C
ATOM 16 N7 A B 51 -33.551 -55.369 58.389 1.00 6.11 N
ATOM 17 C5 A B 51 -34.873 -55.126 58.086 1.00 6.11 C
ATOM 18 C6 A B 51 -35.490 -54.169 57.274 1.00 6.11 C
ATOM 19 N6 A B 51 -34.816 -53.230 56.597 1.00 6.11 N
ATOM 20 N1 A B 51 -36.838 -54.219 57.178 1.00 6.11 N
ATOM 21 C2 A B 51 -37.516 -55.145 57.848 1.00 6.11 C
ATOM 22 N3 A B 51 -37.042 -56.094 58.639 1.00 6.11 N
ATOM 23 C4 A B 51 -35.704 -56.031 58.714 1.00 6.11 C
ATOM 24 P A B 52 -34.039 -62.318 58.471 1.00 0.01 P
ATOM 25 OP1 A B 52 -33.999 -63.719 58.933 1.00 0.01 O
ATOM 26 OP2 A B 52 -32.834 -61.753 57.809 1.00 0.01 O
ATOM 27 O5' A B 52 -35.325 -62.087 57.563 1.00 0.01 O
TER
Atoms:
OP1: (-29.404,-48.352,49.922)
OP2: (-28.163,-49.392,51.868)
C3': (-32.944,-51.253,52.065)
C1': (-32.177,-53.446,52.256)
C5': (-31.326,-50.707,50.185)
O6: (-28.647,-54.881,56.844)
O4': (-31.641,-52.903,51.083)
C8: (-30.147,-52.557,53.486)
C2: (-31.432,-56.284,55.328)
C6: (-29.560,-54.967,56.034)
C5: (-29.925,-54.093,54.975)
C4: (-31.009,-54.444,54.216)
P: (-29.043,-49.549,50.700)
C4': (-32.308,-51.672,50.765)
C2': (-33.323,-52.571,52.692)
O2': (-34.525,-53.068,52.139)
N1: (-30.384,-56.051,56.134)
N2: (-32.114,-57.383,55.585)
N3: (-31.797,-55.526,54.334)
N7: (-29.387,-52.891,54.506)
N9: (-31.132,-53.466,53.267)
O5': (-30.351,-50.342,51.133)
O3': (-34.041,-50.406,51.884)
OP2: (-28.163,-49.392,51.868)
C3': (-32.944,-51.253,52.065)
C1': (-32.177,-53.446,52.256)
C5': (-31.326,-50.707,50.185)
O6: (-28.647,-54.881,56.844)
O4': (-31.641,-52.903,51.083)
C8: (-30.147,-52.557,53.486)
C2: (-31.432,-56.284,55.328)
C6: (-29.560,-54.967,56.034)
C5: (-29.925,-54.093,54.975)
C4: (-31.009,-54.444,54.216)
P: (-29.043,-49.549,50.700)
C4': (-32.308,-51.672,50.765)
C2': (-33.323,-52.571,52.692)
O2': (-34.525,-53.068,52.139)
N1: (-30.384,-56.051,56.134)
N2: (-32.114,-57.383,55.585)
N3: (-31.797,-55.526,54.334)
N7: (-29.387,-52.891,54.506)
N9: (-31.132,-53.466,53.267)
O5': (-30.351,-50.342,51.133)
O3': (-34.041,-50.406,51.884)
OP1: (-29.295,-59.062,60.442)
OP2: (-29.854,-57.993,58.223)
C3': (-34.213,-60.012,59.701)
C1': (-35.237,-57.960,60.302)
C5': (-32.096,-59.370,60.931)
O4': (-34.161,-58.173,61.162)
C8: (-33.604,-56.395,59.184)
O2': (-36.540,-59.918,60.381)
C6: (-35.490,-54.169,57.274)
C5: (-34.873,-55.126,58.086)
C4: (-35.704,-56.031,58.714)
P: (-30.179,-58.190,59.638)
C4': (-33.589,-59.482,60.965)
C2': (-35.546,-59.265,59.612)
C2: (-37.516,-55.145,57.848)
N1: (-36.838,-54.219,57.178)
N3: (-37.042,-56.094,58.639)
N6: (-34.816,-53.230,56.597)
N7: (-33.551,-55.369,58.389)
N9: (-34.872,-56.876,59.386)
O5': (-31.666,-58.691,59.766)
O3': (-34.348,-61.418,59.753)
OP2: (-29.854,-57.993,58.223)
C3': (-34.213,-60.012,59.701)
C1': (-35.237,-57.960,60.302)
C5': (-32.096,-59.370,60.931)
O4': (-34.161,-58.173,61.162)
C8: (-33.604,-56.395,59.184)
O2': (-36.540,-59.918,60.381)
C6: (-35.490,-54.169,57.274)
C5: (-34.873,-55.126,58.086)
C4: (-35.704,-56.031,58.714)
P: (-30.179,-58.190,59.638)
C4': (-33.589,-59.482,60.965)
C2': (-35.546,-59.265,59.612)
C2: (-37.516,-55.145,57.848)
N1: (-36.838,-54.219,57.178)
N3: (-37.042,-56.094,58.639)
N6: (-34.816,-53.230,56.597)
N7: (-33.551,-55.369,58.389)
N9: (-34.872,-56.876,59.386)
O5': (-31.666,-58.691,59.766)
O3': (-34.348,-61.418,59.753)
Image (generated by PyMOL):