Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0270:0356
Extra
PDB:
ATOM 1 O3' U A 269 67.742 97.452 -17.178 1.00123.45 O
ATOM 2 P C A 270 67.111 98.826 -17.739 1.00125.56 P
ATOM 3 OP1 C A 270 65.748 98.505 -18.236 1.00125.73 O
ATOM 4 OP2 C A 270 68.084 99.484 -18.646 1.00125.51 O
ATOM 5 O5' C A 270 66.948 99.739 -16.444 1.00127.17 O
ATOM 6 C5' C A 270 66.282 99.228 -15.276 1.00129.95 C
ATOM 7 C4' C A 270 66.739 99.960 -14.034 1.00131.43 C
ATOM 8 O4' C A 270 68.191 100.063 -14.026 1.00131.82 O
ATOM 9 C3' C A 270 66.294 101.402 -13.872 1.00131.78 C
ATOM 10 O3' C A 270 64.942 101.468 -13.415 1.00133.11 O
ATOM 11 C2' C A 270 67.292 101.906 -12.834 1.00131.58 C
ATOM 12 O2' C A 270 67.016 101.413 -11.538 1.00130.82 O
ATOM 13 C1' C A 270 68.577 101.218 -13.296 1.00131.70 C
ATOM 14 N1 C A 270 69.465 102.063 -14.124 1.00131.82 N
ATOM 15 C2 C A 270 70.268 103.032 -13.487 1.00131.69 C
ATOM 16 O2 C A 270 70.205 103.159 -12.251 1.00131.49 O
ATOM 17 N3 C A 270 71.088 103.804 -14.235 1.00131.62 N
ATOM 18 C4 C A 270 71.131 103.645 -15.559 1.00131.55 C
ATOM 19 N4 C A 270 71.958 104.428 -16.256 1.00131.58 N
ATOM 20 C5 C A 270 70.330 102.675 -16.230 1.00131.80 C
ATOM 21 C6 C A 270 69.519 101.914 -15.483 1.00131.91 C
ATOM 22 P U A 271 64.101 102.834 -13.576 1.00134.16 P
ATOM 23 OP1 U A 271 62.658 102.491 -13.646 1.00133.57 O
ATOM 24 OP2 U A 271 64.718 103.618 -14.676 1.00134.06 O
ATOM 25 O5' U A 271 64.362 103.611 -12.206 1.00135.72 O
TER
ATOM 1 O3' G B 355 72.680 106.822 -7.347 1.00103.76 O
ATOM 2 P C B 356 73.524 105.452 -7.279 1.00104.28 P
ATOM 3 OP1 C B 356 74.805 105.735 -6.575 1.00103.79 O
ATOM 4 OP2 C B 356 73.550 104.831 -8.628 1.00104.29 O
ATOM 5 O5' C B 356 72.636 104.534 -6.328 1.00104.23 O
ATOM 6 C5' C B 356 72.003 105.093 -5.161 1.00104.67 C
ATOM 7 C4' C B 356 70.752 104.321 -4.809 1.00105.10 C
ATOM 8 O4' C B 356 69.769 104.430 -5.875 1.00105.28 O
ATOM 9 C3' C B 356 70.919 102.825 -4.625 1.00104.90 C
ATOM 10 O3' C B 356 71.480 102.501 -3.359 1.00104.00 O
ATOM 11 C2' C B 356 69.488 102.331 -4.796 1.00105.47 C
ATOM 12 O2' C B 356 68.691 102.536 -3.647 1.00105.54 O
ATOM 13 C1' C B 356 68.997 103.236 -5.932 1.00106.27 C
ATOM 14 N1 C B 356 69.193 102.607 -7.254 1.00107.64 N
ATOM 15 C2 C B 356 68.196 101.748 -7.760 1.00107.95 C
ATOM 16 O2 C B 356 67.142 101.590 -7.118 1.00107.38 O
ATOM 17 N3 C B 356 68.411 101.115 -8.937 1.00108.55 N
ATOM 18 C4 C B 356 69.550 101.317 -9.608 1.00108.67 C
ATOM 19 N4 C B 356 69.737 100.645 -10.742 1.00108.26 N
ATOM 20 C5 C B 356 70.555 102.211 -9.139 1.00108.57 C
ATOM 21 C6 C B 356 70.338 102.829 -7.972 1.00108.25 C
ATOM 22 P G B 357 72.751 101.520 -3.283 1.00104.13 P
ATOM 23 OP1 G B 357 73.012 101.237 -1.845 1.00103.13 O
ATOM 24 OP2 G B 357 73.839 102.078 -4.130 1.00103.57 O
ATOM 25 O5' G B 357 72.230 100.182 -3.975 1.00105.61 O
TER
ATOM 2 P C A 270 67.111 98.826 -17.739 1.00125.56 P
ATOM 3 OP1 C A 270 65.748 98.505 -18.236 1.00125.73 O
ATOM 4 OP2 C A 270 68.084 99.484 -18.646 1.00125.51 O
ATOM 5 O5' C A 270 66.948 99.739 -16.444 1.00127.17 O
ATOM 6 C5' C A 270 66.282 99.228 -15.276 1.00129.95 C
ATOM 7 C4' C A 270 66.739 99.960 -14.034 1.00131.43 C
ATOM 8 O4' C A 270 68.191 100.063 -14.026 1.00131.82 O
ATOM 9 C3' C A 270 66.294 101.402 -13.872 1.00131.78 C
ATOM 10 O3' C A 270 64.942 101.468 -13.415 1.00133.11 O
ATOM 11 C2' C A 270 67.292 101.906 -12.834 1.00131.58 C
ATOM 12 O2' C A 270 67.016 101.413 -11.538 1.00130.82 O
ATOM 13 C1' C A 270 68.577 101.218 -13.296 1.00131.70 C
ATOM 14 N1 C A 270 69.465 102.063 -14.124 1.00131.82 N
ATOM 15 C2 C A 270 70.268 103.032 -13.487 1.00131.69 C
ATOM 16 O2 C A 270 70.205 103.159 -12.251 1.00131.49 O
ATOM 17 N3 C A 270 71.088 103.804 -14.235 1.00131.62 N
ATOM 18 C4 C A 270 71.131 103.645 -15.559 1.00131.55 C
ATOM 19 N4 C A 270 71.958 104.428 -16.256 1.00131.58 N
ATOM 20 C5 C A 270 70.330 102.675 -16.230 1.00131.80 C
ATOM 21 C6 C A 270 69.519 101.914 -15.483 1.00131.91 C
ATOM 22 P U A 271 64.101 102.834 -13.576 1.00134.16 P
ATOM 23 OP1 U A 271 62.658 102.491 -13.646 1.00133.57 O
ATOM 24 OP2 U A 271 64.718 103.618 -14.676 1.00134.06 O
ATOM 25 O5' U A 271 64.362 103.611 -12.206 1.00135.72 O
TER
ATOM 1 O3' G B 355 72.680 106.822 -7.347 1.00103.76 O
ATOM 2 P C B 356 73.524 105.452 -7.279 1.00104.28 P
ATOM 3 OP1 C B 356 74.805 105.735 -6.575 1.00103.79 O
ATOM 4 OP2 C B 356 73.550 104.831 -8.628 1.00104.29 O
ATOM 5 O5' C B 356 72.636 104.534 -6.328 1.00104.23 O
ATOM 6 C5' C B 356 72.003 105.093 -5.161 1.00104.67 C
ATOM 7 C4' C B 356 70.752 104.321 -4.809 1.00105.10 C
ATOM 8 O4' C B 356 69.769 104.430 -5.875 1.00105.28 O
ATOM 9 C3' C B 356 70.919 102.825 -4.625 1.00104.90 C
ATOM 10 O3' C B 356 71.480 102.501 -3.359 1.00104.00 O
ATOM 11 C2' C B 356 69.488 102.331 -4.796 1.00105.47 C
ATOM 12 O2' C B 356 68.691 102.536 -3.647 1.00105.54 O
ATOM 13 C1' C B 356 68.997 103.236 -5.932 1.00106.27 C
ATOM 14 N1 C B 356 69.193 102.607 -7.254 1.00107.64 N
ATOM 15 C2 C B 356 68.196 101.748 -7.760 1.00107.95 C
ATOM 16 O2 C B 356 67.142 101.590 -7.118 1.00107.38 O
ATOM 17 N3 C B 356 68.411 101.115 -8.937 1.00108.55 N
ATOM 18 C4 C B 356 69.550 101.317 -9.608 1.00108.67 C
ATOM 19 N4 C B 356 69.737 100.645 -10.742 1.00108.26 N
ATOM 20 C5 C B 356 70.555 102.211 -9.139 1.00108.57 C
ATOM 21 C6 C B 356 70.338 102.829 -7.972 1.00108.25 C
ATOM 22 P G B 357 72.751 101.520 -3.283 1.00104.13 P
ATOM 23 OP1 G B 357 73.012 101.237 -1.845 1.00103.13 O
ATOM 24 OP2 G B 357 73.839 102.078 -4.130 1.00103.57 O
ATOM 25 O5' G B 357 72.230 100.182 -3.975 1.00105.61 O
TER
Atoms:
C2: (70.268,103.032,-13.487)
OP1: (65.748,98.505,-18.236)
OP2: (68.084,99.484,-18.646)
C4: (71.131,103.645,-15.559)
O5': (66.948,99.739,-16.444)
C3': (66.294,101.402,-13.872)
C1': (68.577,101.218,-13.296)
O4': (68.191,100.063,-14.026)
C5': (66.282,99.228,-15.276)
P: (67.111,98.826,-17.739)
O2: (70.205,103.159,-12.251)
C4': (66.739,99.960,-14.034)
C2': (67.292,101.906,-12.834)
O2': (67.016,101.413,-11.538)
N1: (69.465,102.063,-14.124)
N3: (71.088,103.804,-14.235)
N4: (71.958,104.428,-16.256)
C6: (69.519,101.914,-15.483)
C5: (70.330,102.675,-16.230)
O3': (64.942,101.468,-13.415)
OP1: (65.748,98.505,-18.236)
OP2: (68.084,99.484,-18.646)
C4: (71.131,103.645,-15.559)
O5': (66.948,99.739,-16.444)
C3': (66.294,101.402,-13.872)
C1': (68.577,101.218,-13.296)
O4': (68.191,100.063,-14.026)
C5': (66.282,99.228,-15.276)
P: (67.111,98.826,-17.739)
O2: (70.205,103.159,-12.251)
C4': (66.739,99.960,-14.034)
C2': (67.292,101.906,-12.834)
O2': (67.016,101.413,-11.538)
N1: (69.465,102.063,-14.124)
N3: (71.088,103.804,-14.235)
N4: (71.958,104.428,-16.256)
C6: (69.519,101.914,-15.483)
C5: (70.330,102.675,-16.230)
O3': (64.942,101.468,-13.415)
C2: (68.196,101.748,-7.760)
OP1: (74.805,105.735,-6.575)
OP2: (73.550,104.831,-8.628)
C4: (69.550,101.317,-9.608)
O5': (72.636,104.534,-6.328)
C3': (70.919,102.825,-4.625)
C1': (68.997,103.236,-5.932)
O4': (69.769,104.430,-5.875)
C5': (72.003,105.093,-5.161)
P: (73.524,105.452,-7.279)
O2: (67.142,101.590,-7.118)
C4': (70.752,104.321,-4.809)
C2': (69.488,102.331,-4.796)
O2': (68.691,102.536,-3.647)
N1: (69.193,102.607,-7.254)
N3: (68.411,101.115,-8.937)
N4: (69.737,100.645,-10.742)
C6: (70.338,102.829,-7.972)
C5: (70.555,102.211,-9.139)
O3': (71.480,102.501,-3.359)
OP1: (74.805,105.735,-6.575)
OP2: (73.550,104.831,-8.628)
C4: (69.550,101.317,-9.608)
O5': (72.636,104.534,-6.328)
C3': (70.919,102.825,-4.625)
C1': (68.997,103.236,-5.932)
O4': (69.769,104.430,-5.875)
C5': (72.003,105.093,-5.161)
P: (73.524,105.452,-7.279)
O2: (67.142,101.590,-7.118)
C4': (70.752,104.321,-4.809)
C2': (69.488,102.331,-4.796)
O2': (68.691,102.536,-3.647)
N1: (69.193,102.607,-7.254)
N3: (68.411,101.115,-8.937)
N4: (69.737,100.645,-10.742)
C6: (70.338,102.829,-7.972)
C5: (70.555,102.211,-9.139)
O3': (71.480,102.501,-3.359)
Image (generated by PyMOL):