Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0270:0356
Extra
PDB:
ATOM 1 O3' U A 269 68.239 97.849 -17.084 1.00135.91 O
ATOM 2 P C A 270 67.664 99.213 -17.725 1.00138.49 P
ATOM 3 OP1 C A 270 66.363 98.877 -18.359 1.00138.54 O
ATOM 4 OP2 C A 270 68.727 99.866 -18.532 1.00138.34 O
ATOM 5 O5' C A 270 67.359 100.143 -16.468 1.00140.13 O
ATOM 6 C5' C A 270 66.543 99.660 -15.386 1.00142.71 C
ATOM 7 C4' C A 270 66.936 100.319 -14.082 1.00144.27 C
ATOM 8 O4' C A 270 68.385 100.426 -14.013 1.00144.67 O
ATOM 9 C3' C A 270 66.494 101.755 -13.845 1.00144.98 C
ATOM 10 O3' C A 270 65.116 101.816 -13.451 1.00147.00 O
ATOM 11 C2' C A 270 67.428 102.160 -12.708 1.00144.55 C
ATOM 12 O2' C A 270 67.050 101.582 -11.476 1.00144.17 O
ATOM 13 C1' C A 270 68.731 101.479 -13.128 1.00144.36 C
ATOM 14 N1 C A 270 69.720 102.370 -13.770 1.00143.97 N
ATOM 15 C2 C A 270 70.936 102.619 -13.106 1.00143.36 C
ATOM 16 O2 C A 270 71.158 102.064 -12.016 1.00142.76 O
ATOM 17 N3 C A 270 71.837 103.456 -13.670 1.00143.03 N
ATOM 18 C4 C A 270 71.570 104.031 -14.844 1.00142.89 C
ATOM 19 N4 C A 270 72.483 104.861 -15.353 1.00142.56 N
ATOM 20 C5 C A 270 70.354 103.785 -15.548 1.00143.17 C
ATOM 21 C6 C A 270 69.466 102.957 -14.980 1.00143.76 C
ATOM 22 P U A 271 64.294 103.205 -13.572 1.00148.34 P
ATOM 23 OP1 U A 271 62.865 102.871 -13.804 1.00147.61 O
ATOM 24 OP2 U A 271 65.002 104.089 -14.538 1.00148.43 O
ATOM 25 O5' U A 271 64.419 103.872 -12.125 1.00149.82 O
TER
ATOM 1 O3' G B 355 72.992 106.967 -7.290 1.00119.31 O
ATOM 2 P C B 356 73.622 105.484 -7.370 1.00120.56 P
ATOM 3 OP1 C B 356 74.980 105.509 -6.749 1.00118.94 O
ATOM 4 OP2 C B 356 73.459 104.976 -8.759 1.00120.79 O
ATOM 5 O5' C B 356 72.664 104.632 -6.426 1.00119.89 O
ATOM 6 C5' C B 356 72.122 105.208 -5.226 1.00119.41 C
ATOM 7 C4' C B 356 70.936 104.410 -4.743 1.00119.56 C
ATOM 8 O4' C B 356 69.861 104.472 -5.720 1.00120.01 O
ATOM 9 C3' C B 356 71.160 102.922 -4.546 1.00118.93 C
ATOM 10 O3' C B 356 71.842 102.635 -3.327 1.00117.98 O
ATOM 11 C2' C B 356 69.733 102.389 -4.572 1.00119.33 C
ATOM 12 O2' C B 356 69.053 102.575 -3.345 1.00118.39 O
ATOM 13 C1' C B 356 69.106 103.267 -5.666 1.00120.46 C
ATOM 14 N1 C B 356 69.147 102.615 -6.994 1.00121.41 N
ATOM 15 C2 C B 356 67.994 101.956 -7.471 1.00121.32 C
ATOM 16 O2 C B 356 66.938 102.025 -6.820 1.00120.31 O
ATOM 17 N3 C B 356 68.067 101.268 -8.634 1.00121.99 N
ATOM 18 C4 C B 356 69.213 101.233 -9.321 1.00122.47 C
ATOM 19 N4 C B 356 69.256 100.492 -10.430 1.00122.69 N
ATOM 20 C5 C B 356 70.373 101.943 -8.894 1.00122.06 C
ATOM 21 C6 C B 356 70.297 102.614 -7.739 1.00121.94 C
ATOM 22 P G B 357 73.107 101.638 -3.337 1.00118.08 P
ATOM 23 OP1 G B 357 73.477 101.374 -1.921 1.00116.98 O
ATOM 24 OP2 G B 357 74.134 102.177 -4.274 1.00116.73 O
ATOM 25 O5' G B 357 72.521 100.291 -3.965 1.00118.80 O
TER
ATOM 2 P C A 270 67.664 99.213 -17.725 1.00138.49 P
ATOM 3 OP1 C A 270 66.363 98.877 -18.359 1.00138.54 O
ATOM 4 OP2 C A 270 68.727 99.866 -18.532 1.00138.34 O
ATOM 5 O5' C A 270 67.359 100.143 -16.468 1.00140.13 O
ATOM 6 C5' C A 270 66.543 99.660 -15.386 1.00142.71 C
ATOM 7 C4' C A 270 66.936 100.319 -14.082 1.00144.27 C
ATOM 8 O4' C A 270 68.385 100.426 -14.013 1.00144.67 O
ATOM 9 C3' C A 270 66.494 101.755 -13.845 1.00144.98 C
ATOM 10 O3' C A 270 65.116 101.816 -13.451 1.00147.00 O
ATOM 11 C2' C A 270 67.428 102.160 -12.708 1.00144.55 C
ATOM 12 O2' C A 270 67.050 101.582 -11.476 1.00144.17 O
ATOM 13 C1' C A 270 68.731 101.479 -13.128 1.00144.36 C
ATOM 14 N1 C A 270 69.720 102.370 -13.770 1.00143.97 N
ATOM 15 C2 C A 270 70.936 102.619 -13.106 1.00143.36 C
ATOM 16 O2 C A 270 71.158 102.064 -12.016 1.00142.76 O
ATOM 17 N3 C A 270 71.837 103.456 -13.670 1.00143.03 N
ATOM 18 C4 C A 270 71.570 104.031 -14.844 1.00142.89 C
ATOM 19 N4 C A 270 72.483 104.861 -15.353 1.00142.56 N
ATOM 20 C5 C A 270 70.354 103.785 -15.548 1.00143.17 C
ATOM 21 C6 C A 270 69.466 102.957 -14.980 1.00143.76 C
ATOM 22 P U A 271 64.294 103.205 -13.572 1.00148.34 P
ATOM 23 OP1 U A 271 62.865 102.871 -13.804 1.00147.61 O
ATOM 24 OP2 U A 271 65.002 104.089 -14.538 1.00148.43 O
ATOM 25 O5' U A 271 64.419 103.872 -12.125 1.00149.82 O
TER
ATOM 1 O3' G B 355 72.992 106.967 -7.290 1.00119.31 O
ATOM 2 P C B 356 73.622 105.484 -7.370 1.00120.56 P
ATOM 3 OP1 C B 356 74.980 105.509 -6.749 1.00118.94 O
ATOM 4 OP2 C B 356 73.459 104.976 -8.759 1.00120.79 O
ATOM 5 O5' C B 356 72.664 104.632 -6.426 1.00119.89 O
ATOM 6 C5' C B 356 72.122 105.208 -5.226 1.00119.41 C
ATOM 7 C4' C B 356 70.936 104.410 -4.743 1.00119.56 C
ATOM 8 O4' C B 356 69.861 104.472 -5.720 1.00120.01 O
ATOM 9 C3' C B 356 71.160 102.922 -4.546 1.00118.93 C
ATOM 10 O3' C B 356 71.842 102.635 -3.327 1.00117.98 O
ATOM 11 C2' C B 356 69.733 102.389 -4.572 1.00119.33 C
ATOM 12 O2' C B 356 69.053 102.575 -3.345 1.00118.39 O
ATOM 13 C1' C B 356 69.106 103.267 -5.666 1.00120.46 C
ATOM 14 N1 C B 356 69.147 102.615 -6.994 1.00121.41 N
ATOM 15 C2 C B 356 67.994 101.956 -7.471 1.00121.32 C
ATOM 16 O2 C B 356 66.938 102.025 -6.820 1.00120.31 O
ATOM 17 N3 C B 356 68.067 101.268 -8.634 1.00121.99 N
ATOM 18 C4 C B 356 69.213 101.233 -9.321 1.00122.47 C
ATOM 19 N4 C B 356 69.256 100.492 -10.430 1.00122.69 N
ATOM 20 C5 C B 356 70.373 101.943 -8.894 1.00122.06 C
ATOM 21 C6 C B 356 70.297 102.614 -7.739 1.00121.94 C
ATOM 22 P G B 357 73.107 101.638 -3.337 1.00118.08 P
ATOM 23 OP1 G B 357 73.477 101.374 -1.921 1.00116.98 O
ATOM 24 OP2 G B 357 74.134 102.177 -4.274 1.00116.73 O
ATOM 25 O5' G B 357 72.521 100.291 -3.965 1.00118.80 O
TER
Atoms:
C2: (70.936,102.619,-13.106)
OP1: (66.363,98.877,-18.359)
OP2: (68.727,99.866,-18.532)
C4: (71.570,104.031,-14.844)
O5': (67.359,100.143,-16.468)
C3': (66.494,101.755,-13.845)
C1': (68.731,101.479,-13.128)
O4': (68.385,100.426,-14.013)
C5': (66.543,99.660,-15.386)
P: (67.664,99.213,-17.725)
O2: (71.158,102.064,-12.016)
C4': (66.936,100.319,-14.082)
C2': (67.428,102.160,-12.708)
O2': (67.050,101.582,-11.476)
N1: (69.720,102.370,-13.770)
N3: (71.837,103.456,-13.670)
N4: (72.483,104.861,-15.353)
C6: (69.466,102.957,-14.980)
C5: (70.354,103.785,-15.548)
O3': (65.116,101.816,-13.451)
OP1: (66.363,98.877,-18.359)
OP2: (68.727,99.866,-18.532)
C4: (71.570,104.031,-14.844)
O5': (67.359,100.143,-16.468)
C3': (66.494,101.755,-13.845)
C1': (68.731,101.479,-13.128)
O4': (68.385,100.426,-14.013)
C5': (66.543,99.660,-15.386)
P: (67.664,99.213,-17.725)
O2: (71.158,102.064,-12.016)
C4': (66.936,100.319,-14.082)
C2': (67.428,102.160,-12.708)
O2': (67.050,101.582,-11.476)
N1: (69.720,102.370,-13.770)
N3: (71.837,103.456,-13.670)
N4: (72.483,104.861,-15.353)
C6: (69.466,102.957,-14.980)
C5: (70.354,103.785,-15.548)
O3': (65.116,101.816,-13.451)
C2: (67.994,101.956,-7.471)
OP1: (74.980,105.509,-6.749)
OP2: (73.459,104.976,-8.759)
C4: (69.213,101.233,-9.321)
O5': (72.664,104.632,-6.426)
C3': (71.160,102.922,-4.546)
C1': (69.106,103.267,-5.666)
O4': (69.861,104.472,-5.720)
C5': (72.122,105.208,-5.226)
P: (73.622,105.484,-7.370)
O2: (66.938,102.025,-6.820)
C4': (70.936,104.410,-4.743)
C2': (69.733,102.389,-4.572)
O2': (69.053,102.575,-3.345)
N1: (69.147,102.615,-6.994)
N3: (68.067,101.268,-8.634)
N4: (69.256,100.492,-10.430)
C6: (70.297,102.614,-7.739)
C5: (70.373,101.943,-8.894)
O3': (71.842,102.635,-3.327)
OP1: (74.980,105.509,-6.749)
OP2: (73.459,104.976,-8.759)
C4: (69.213,101.233,-9.321)
O5': (72.664,104.632,-6.426)
C3': (71.160,102.922,-4.546)
C1': (69.106,103.267,-5.666)
O4': (69.861,104.472,-5.720)
C5': (72.122,105.208,-5.226)
P: (73.622,105.484,-7.370)
O2: (66.938,102.025,-6.820)
C4': (70.936,104.410,-4.743)
C2': (69.733,102.389,-4.572)
O2': (69.053,102.575,-3.345)
N1: (69.147,102.615,-6.994)
N3: (68.067,101.268,-8.634)
N4: (69.256,100.492,-10.430)
C6: (70.297,102.614,-7.739)
C5: (70.373,101.943,-8.894)
O3': (71.842,102.635,-3.327)
Image (generated by PyMOL):