Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2HOO:A68:A52
Extra
PDB:
ATOM 1 O3' G A 67 -9.712 24.767 53.011 1.00115.45 O
ATOM 2 P C A 68 -9.728 23.636 54.157 1.00118.36 P
ATOM 3 OP1 C A 68 -11.050 23.672 54.846 1.00117.42 O
ATOM 4 OP2 C A 68 -8.481 23.823 54.948 1.00117.03 O
ATOM 5 O5' C A 68 -9.636 22.257 53.356 1.00116.30 O
ATOM 6 C5' C A 68 -10.727 21.805 52.547 1.00111.47 C
ATOM 7 C4' C A 68 -10.318 20.599 51.731 1.00107.21 C
ATOM 8 O4' C A 68 -9.173 20.956 50.910 1.00107.62 O
ATOM 9 C3' C A 68 -9.863 19.382 52.520 1.00105.16 C
ATOM 10 O3' C A 68 -10.992 18.589 52.887 1.00106.03 O
ATOM 11 C2' C A 68 -8.948 18.671 51.525 1.00103.97 C
ATOM 12 O2' C A 68 -9.645 17.871 50.590 1.00100.05 O
ATOM 13 C1' C A 68 -8.283 19.854 50.814 1.00101.65 C
ATOM 14 N1 C A 68 -6.988 20.263 51.393 1.00 94.76 N
ATOM 15 C2 C A 68 -5.808 19.778 50.824 1.00 89.83 C
ATOM 16 O2 C A 68 -5.883 19.004 49.872 1.00 84.87 O
ATOM 17 N3 C A 68 -4.617 20.168 51.331 1.00 88.34 N
ATOM 18 C4 C A 68 -4.580 21.001 52.372 1.00 86.12 C
ATOM 19 N4 C A 68 -3.385 21.363 52.842 1.00 83.76 N
ATOM 20 C5 C A 68 -5.767 21.501 52.978 1.00 85.78 C
ATOM 21 C6 C A 68 -6.937 21.110 52.464 1.00 88.00 C
ATOM 22 P G A 69 -10.790 17.239 53.752 1.00107.70 P
ATOM 23 OP1 G A 69 -9.892 16.332 52.974 1.00104.22 O
ATOM 24 OP2 G A 69 -12.137 16.753 54.163 1.00105.29 O
ATOM 25 O5' G A 69 -10.043 17.713 55.085 1.00103.03 O
TER
ATOM 1 O3' G B 51 -6.487 11.458 44.442 1.00 91.69 O
ATOM 2 P A B 52 -5.768 11.454 42.993 1.00 98.58 P
ATOM 3 OP1 A B 52 -6.715 12.087 42.034 1.00 95.56 O
ATOM 4 OP2 A B 52 -5.282 10.065 42.738 1.00 98.04 O
ATOM 5 O5' A B 52 -4.497 12.418 43.116 1.00100.08 O
ATOM 6 C5' A B 52 -3.789 12.845 41.943 1.00 98.78 C
ATOM 7 C4' A B 52 -2.493 13.544 42.314 1.00101.45 C
ATOM 8 O4' A B 52 -2.803 14.767 43.036 1.00102.08 O
ATOM 9 C3' A B 52 -1.628 12.708 43.253 1.00103.11 C
ATOM 10 O3' A B 52 -0.253 12.513 42.891 1.00103.40 O
ATOM 11 C2' A B 52 -1.894 13.239 44.663 1.00102.75 C
ATOM 12 O2' A B 52 -0.702 13.390 45.406 1.00105.06 O
ATOM 13 C1' A B 52 -2.416 14.652 44.392 1.00101.18 C
ATOM 14 N9 A B 52 -3.526 15.068 45.243 1.00 99.66 N
ATOM 15 C8 A B 52 -4.844 14.697 45.157 1.00 98.88 C
ATOM 16 N7 A B 52 -5.603 15.231 46.081 1.00 98.43 N
ATOM 17 C5 A B 52 -4.727 16.010 46.826 1.00 94.93 C
ATOM 18 C6 A B 52 -4.914 16.828 47.954 1.00 93.85 C
ATOM 19 N6 A B 52 -6.093 17.000 48.559 1.00 97.20 N
ATOM 20 N1 A B 52 -3.835 17.469 48.448 1.00 90.13 N
ATOM 21 C2 A B 52 -2.659 17.289 47.847 1.00 88.66 C
ATOM 22 N3 A B 52 -2.356 16.544 46.788 1.00 89.23 N
ATOM 23 C4 A B 52 -3.448 15.922 46.318 1.00 94.70 C
ATOM 24 P U B 53 0.151 12.189 41.370 1.00101.29 P
ATOM 25 OP1 U B 53 -0.699 11.082 40.869 1.00102.62 O
ATOM 26 OP2 U B 53 1.629 12.052 41.342 1.00101.79 O
ATOM 27 O5' U B 53 -0.247 13.517 40.582 1.00102.04 O
TER
ATOM 2 P C A 68 -9.728 23.636 54.157 1.00118.36 P
ATOM 3 OP1 C A 68 -11.050 23.672 54.846 1.00117.42 O
ATOM 4 OP2 C A 68 -8.481 23.823 54.948 1.00117.03 O
ATOM 5 O5' C A 68 -9.636 22.257 53.356 1.00116.30 O
ATOM 6 C5' C A 68 -10.727 21.805 52.547 1.00111.47 C
ATOM 7 C4' C A 68 -10.318 20.599 51.731 1.00107.21 C
ATOM 8 O4' C A 68 -9.173 20.956 50.910 1.00107.62 O
ATOM 9 C3' C A 68 -9.863 19.382 52.520 1.00105.16 C
ATOM 10 O3' C A 68 -10.992 18.589 52.887 1.00106.03 O
ATOM 11 C2' C A 68 -8.948 18.671 51.525 1.00103.97 C
ATOM 12 O2' C A 68 -9.645 17.871 50.590 1.00100.05 O
ATOM 13 C1' C A 68 -8.283 19.854 50.814 1.00101.65 C
ATOM 14 N1 C A 68 -6.988 20.263 51.393 1.00 94.76 N
ATOM 15 C2 C A 68 -5.808 19.778 50.824 1.00 89.83 C
ATOM 16 O2 C A 68 -5.883 19.004 49.872 1.00 84.87 O
ATOM 17 N3 C A 68 -4.617 20.168 51.331 1.00 88.34 N
ATOM 18 C4 C A 68 -4.580 21.001 52.372 1.00 86.12 C
ATOM 19 N4 C A 68 -3.385 21.363 52.842 1.00 83.76 N
ATOM 20 C5 C A 68 -5.767 21.501 52.978 1.00 85.78 C
ATOM 21 C6 C A 68 -6.937 21.110 52.464 1.00 88.00 C
ATOM 22 P G A 69 -10.790 17.239 53.752 1.00107.70 P
ATOM 23 OP1 G A 69 -9.892 16.332 52.974 1.00104.22 O
ATOM 24 OP2 G A 69 -12.137 16.753 54.163 1.00105.29 O
ATOM 25 O5' G A 69 -10.043 17.713 55.085 1.00103.03 O
TER
ATOM 1 O3' G B 51 -6.487 11.458 44.442 1.00 91.69 O
ATOM 2 P A B 52 -5.768 11.454 42.993 1.00 98.58 P
ATOM 3 OP1 A B 52 -6.715 12.087 42.034 1.00 95.56 O
ATOM 4 OP2 A B 52 -5.282 10.065 42.738 1.00 98.04 O
ATOM 5 O5' A B 52 -4.497 12.418 43.116 1.00100.08 O
ATOM 6 C5' A B 52 -3.789 12.845 41.943 1.00 98.78 C
ATOM 7 C4' A B 52 -2.493 13.544 42.314 1.00101.45 C
ATOM 8 O4' A B 52 -2.803 14.767 43.036 1.00102.08 O
ATOM 9 C3' A B 52 -1.628 12.708 43.253 1.00103.11 C
ATOM 10 O3' A B 52 -0.253 12.513 42.891 1.00103.40 O
ATOM 11 C2' A B 52 -1.894 13.239 44.663 1.00102.75 C
ATOM 12 O2' A B 52 -0.702 13.390 45.406 1.00105.06 O
ATOM 13 C1' A B 52 -2.416 14.652 44.392 1.00101.18 C
ATOM 14 N9 A B 52 -3.526 15.068 45.243 1.00 99.66 N
ATOM 15 C8 A B 52 -4.844 14.697 45.157 1.00 98.88 C
ATOM 16 N7 A B 52 -5.603 15.231 46.081 1.00 98.43 N
ATOM 17 C5 A B 52 -4.727 16.010 46.826 1.00 94.93 C
ATOM 18 C6 A B 52 -4.914 16.828 47.954 1.00 93.85 C
ATOM 19 N6 A B 52 -6.093 17.000 48.559 1.00 97.20 N
ATOM 20 N1 A B 52 -3.835 17.469 48.448 1.00 90.13 N
ATOM 21 C2 A B 52 -2.659 17.289 47.847 1.00 88.66 C
ATOM 22 N3 A B 52 -2.356 16.544 46.788 1.00 89.23 N
ATOM 23 C4 A B 52 -3.448 15.922 46.318 1.00 94.70 C
ATOM 24 P U B 53 0.151 12.189 41.370 1.00101.29 P
ATOM 25 OP1 U B 53 -0.699 11.082 40.869 1.00102.62 O
ATOM 26 OP2 U B 53 1.629 12.052 41.342 1.00101.79 O
ATOM 27 O5' U B 53 -0.247 13.517 40.582 1.00102.04 O
TER
Atoms:
C2: (-5.808,19.778,50.824)
OP1: (-11.050,23.672,54.846)
OP2: (-8.481,23.823,54.948)
C4: (-4.580,21.001,52.372)
O5': (-9.636,22.257,53.356)
C3': (-9.863,19.382,52.520)
C1': (-8.283,19.854,50.814)
O4': (-9.173,20.956,50.910)
C5': (-10.727,21.805,52.547)
P: (-9.728,23.636,54.157)
O2: (-5.883,19.004,49.872)
C4': (-10.318,20.599,51.731)
C2': (-8.948,18.671,51.525)
O2': (-9.645,17.871,50.590)
N1: (-6.988,20.263,51.393)
N3: (-4.617,20.168,51.331)
N4: (-3.385,21.363,52.842)
C6: (-6.937,21.110,52.464)
C5: (-5.767,21.501,52.978)
O3': (-10.992,18.589,52.887)
OP1: (-11.050,23.672,54.846)
OP2: (-8.481,23.823,54.948)
C4: (-4.580,21.001,52.372)
O5': (-9.636,22.257,53.356)
C3': (-9.863,19.382,52.520)
C1': (-8.283,19.854,50.814)
O4': (-9.173,20.956,50.910)
C5': (-10.727,21.805,52.547)
P: (-9.728,23.636,54.157)
O2: (-5.883,19.004,49.872)
C4': (-10.318,20.599,51.731)
C2': (-8.948,18.671,51.525)
O2': (-9.645,17.871,50.590)
N1: (-6.988,20.263,51.393)
N3: (-4.617,20.168,51.331)
N4: (-3.385,21.363,52.842)
C6: (-6.937,21.110,52.464)
C5: (-5.767,21.501,52.978)
O3': (-10.992,18.589,52.887)
OP1: (-6.715,12.087,42.034)
OP2: (-5.282,10.065,42.738)
C3': (-1.628,12.708,43.253)
C1': (-2.416,14.652,44.392)
C5': (-3.789,12.845,41.943)
O4': (-2.803,14.767,43.036)
C8: (-4.844,14.697,45.157)
O2': (-0.702,13.390,45.406)
C6: (-4.914,16.828,47.954)
C5: (-4.727,16.010,46.826)
C4: (-3.448,15.922,46.318)
P: (-5.768,11.454,42.993)
C4': (-2.493,13.544,42.314)
C2': (-1.894,13.239,44.663)
C2: (-2.659,17.289,47.847)
N1: (-3.835,17.469,48.448)
N3: (-2.356,16.544,46.788)
N6: (-6.093,17.000,48.559)
N7: (-5.603,15.231,46.081)
N9: (-3.526,15.068,45.243)
O5': (-4.497,12.418,43.116)
O3': (-0.253,12.513,42.891)
OP2: (-5.282,10.065,42.738)
C3': (-1.628,12.708,43.253)
C1': (-2.416,14.652,44.392)
C5': (-3.789,12.845,41.943)
O4': (-2.803,14.767,43.036)
C8: (-4.844,14.697,45.157)
O2': (-0.702,13.390,45.406)
C6: (-4.914,16.828,47.954)
C5: (-4.727,16.010,46.826)
C4: (-3.448,15.922,46.318)
P: (-5.768,11.454,42.993)
C4': (-2.493,13.544,42.314)
C2': (-1.894,13.239,44.663)
C2: (-2.659,17.289,47.847)
N1: (-3.835,17.469,48.448)
N3: (-2.356,16.544,46.788)
N6: (-6.093,17.000,48.559)
N7: (-5.603,15.231,46.081)
N9: (-3.526,15.068,45.243)
O5': (-4.497,12.418,43.116)
O3': (-0.253,12.513,42.891)
Image (generated by PyMOL):