Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NDB:M75:M54
Extra
PDB:
ATOM 1 O3' C A 74 -34.551 34.620 -47.314 1.00 78.37 O
ATOM 2 P C A 75 -35.523 33.755 -48.271 1.00 80.05 P
ATOM 3 OP1 C A 75 -35.280 34.266 -49.645 1.00 80.53 O
ATOM 4 OP2 C A 75 -36.860 33.759 -47.607 1.00 78.82 O
ATOM 5 O5' C A 75 -35.063 32.215 -48.201 1.00 75.15 O
ATOM 6 C5' C A 75 -34.926 31.335 -49.315 1.00 69.41 C
ATOM 7 C4' C A 75 -36.213 31.035 -50.061 1.00 66.94 C
ATOM 8 O4' C A 75 -35.664 30.843 -51.379 1.00 65.38 O
ATOM 9 C3' C A 75 -36.975 29.733 -49.798 1.00 64.58 C
ATOM 10 O3' C A 75 -38.077 29.793 -48.846 1.00 66.18 O
ATOM 11 C2' C A 75 -37.453 29.363 -51.214 1.00 63.78 C
ATOM 12 O2' C A 75 -38.701 29.929 -51.636 1.00 64.54 O
ATOM 13 C1' C A 75 -36.274 29.801 -52.083 1.00 63.25 C
ATOM 14 N1 C A 75 -35.262 28.725 -52.266 1.00 61.21 N
ATOM 15 C2 C A 75 -35.526 27.661 -53.133 1.00 61.72 C
ATOM 16 O2 C A 75 -36.592 27.665 -53.748 1.00 62.69 O
ATOM 17 N3 C A 75 -34.628 26.648 -53.295 1.00 61.14 N
ATOM 18 C4 C A 75 -33.494 26.676 -52.612 1.00 60.09 C
ATOM 19 N4 C A 75 -32.628 25.673 -52.787 1.00 58.66 N
ATOM 20 C5 C A 75 -33.201 27.761 -51.728 1.00 59.60 C
ATOM 21 C6 C A 75 -34.092 28.745 -51.584 1.00 59.64 C
ATOM 22 P C A 76 -38.668 28.389 -48.245 1.00 67.85 P
ATOM 23 OP1 C A 76 -39.737 28.690 -47.281 1.00 69.86 O
ATOM 24 OP2 C A 76 -37.529 27.563 -47.798 1.00 66.85 O
ATOM 25 O5' C A 76 -39.474 27.550 -49.350 1.00 65.60 O
TER
ATOM 1 O3' A B 53 -44.941 28.210 -59.644 1.00 78.58 O
ATOM 2 P A B 54 -46.069 27.276 -59.016 1.00 79.87 P
ATOM 3 OP1 A B 54 -47.200 27.108 -59.947 1.00 78.02 O
ATOM 4 OP2 A B 54 -46.386 27.870 -57.690 1.00 79.71 O
ATOM 5 O5' A B 54 -45.281 25.866 -58.851 1.00 77.52 O
ATOM 6 C5' A B 54 -44.183 25.461 -59.629 1.00 76.19 C
ATOM 7 C4' A B 54 -43.146 24.838 -58.724 1.00 76.93 C
ATOM 8 O4' A B 54 -42.459 25.846 -57.947 1.00 76.59 O
ATOM 9 C3' A B 54 -43.665 23.855 -57.692 1.00 78.25 C
ATOM 10 O3' A B 54 -42.830 22.724 -57.744 1.00 79.53 O
ATOM 11 C2' A B 54 -43.504 24.550 -56.343 1.00 77.55 C
ATOM 12 O2' A B 54 -43.091 23.665 -55.324 1.00 79.46 O
ATOM 13 C1' A B 54 -42.344 25.481 -56.589 1.00 74.98 C
ATOM 14 N9 A B 54 -42.423 26.687 -55.787 1.00 73.95 N
ATOM 15 C8 A B 54 -43.519 27.466 -55.510 1.00 75.39 C
ATOM 16 N7 A B 54 -43.264 28.552 -54.779 1.00 75.35 N
ATOM 17 C5 A B 54 -41.902 28.469 -54.560 1.00 73.42 C
ATOM 18 C6 A B 54 -41.000 29.274 -53.846 1.00 70.94 C
ATOM 19 N6 A B 54 -41.307 30.352 -53.186 1.00 71.85 N
ATOM 20 N1 A B 54 -39.725 28.935 -53.813 1.00 71.11 N
ATOM 21 C2 A B 54 -39.372 27.828 -54.484 1.00 73.20 C
ATOM 22 N3 A B 54 -40.108 26.953 -55.184 1.00 73.91 N
ATOM 23 C4 A B 54 -41.385 27.333 -55.178 1.00 73.69 C
ATOM 24 P C B 55 -43.283 21.503 -58.654 1.00 82.10 P
ATOM 25 OP1 C B 55 -42.204 20.484 -58.631 1.00 82.60 O
ATOM 26 OP2 C B 55 -43.754 22.080 -59.931 1.00 84.52 O
ATOM 27 O5' C B 55 -44.555 20.908 -57.894 1.00 83.74 O
TER
ATOM 2 P C A 75 -35.523 33.755 -48.271 1.00 80.05 P
ATOM 3 OP1 C A 75 -35.280 34.266 -49.645 1.00 80.53 O
ATOM 4 OP2 C A 75 -36.860 33.759 -47.607 1.00 78.82 O
ATOM 5 O5' C A 75 -35.063 32.215 -48.201 1.00 75.15 O
ATOM 6 C5' C A 75 -34.926 31.335 -49.315 1.00 69.41 C
ATOM 7 C4' C A 75 -36.213 31.035 -50.061 1.00 66.94 C
ATOM 8 O4' C A 75 -35.664 30.843 -51.379 1.00 65.38 O
ATOM 9 C3' C A 75 -36.975 29.733 -49.798 1.00 64.58 C
ATOM 10 O3' C A 75 -38.077 29.793 -48.846 1.00 66.18 O
ATOM 11 C2' C A 75 -37.453 29.363 -51.214 1.00 63.78 C
ATOM 12 O2' C A 75 -38.701 29.929 -51.636 1.00 64.54 O
ATOM 13 C1' C A 75 -36.274 29.801 -52.083 1.00 63.25 C
ATOM 14 N1 C A 75 -35.262 28.725 -52.266 1.00 61.21 N
ATOM 15 C2 C A 75 -35.526 27.661 -53.133 1.00 61.72 C
ATOM 16 O2 C A 75 -36.592 27.665 -53.748 1.00 62.69 O
ATOM 17 N3 C A 75 -34.628 26.648 -53.295 1.00 61.14 N
ATOM 18 C4 C A 75 -33.494 26.676 -52.612 1.00 60.09 C
ATOM 19 N4 C A 75 -32.628 25.673 -52.787 1.00 58.66 N
ATOM 20 C5 C A 75 -33.201 27.761 -51.728 1.00 59.60 C
ATOM 21 C6 C A 75 -34.092 28.745 -51.584 1.00 59.64 C
ATOM 22 P C A 76 -38.668 28.389 -48.245 1.00 67.85 P
ATOM 23 OP1 C A 76 -39.737 28.690 -47.281 1.00 69.86 O
ATOM 24 OP2 C A 76 -37.529 27.563 -47.798 1.00 66.85 O
ATOM 25 O5' C A 76 -39.474 27.550 -49.350 1.00 65.60 O
TER
ATOM 1 O3' A B 53 -44.941 28.210 -59.644 1.00 78.58 O
ATOM 2 P A B 54 -46.069 27.276 -59.016 1.00 79.87 P
ATOM 3 OP1 A B 54 -47.200 27.108 -59.947 1.00 78.02 O
ATOM 4 OP2 A B 54 -46.386 27.870 -57.690 1.00 79.71 O
ATOM 5 O5' A B 54 -45.281 25.866 -58.851 1.00 77.52 O
ATOM 6 C5' A B 54 -44.183 25.461 -59.629 1.00 76.19 C
ATOM 7 C4' A B 54 -43.146 24.838 -58.724 1.00 76.93 C
ATOM 8 O4' A B 54 -42.459 25.846 -57.947 1.00 76.59 O
ATOM 9 C3' A B 54 -43.665 23.855 -57.692 1.00 78.25 C
ATOM 10 O3' A B 54 -42.830 22.724 -57.744 1.00 79.53 O
ATOM 11 C2' A B 54 -43.504 24.550 -56.343 1.00 77.55 C
ATOM 12 O2' A B 54 -43.091 23.665 -55.324 1.00 79.46 O
ATOM 13 C1' A B 54 -42.344 25.481 -56.589 1.00 74.98 C
ATOM 14 N9 A B 54 -42.423 26.687 -55.787 1.00 73.95 N
ATOM 15 C8 A B 54 -43.519 27.466 -55.510 1.00 75.39 C
ATOM 16 N7 A B 54 -43.264 28.552 -54.779 1.00 75.35 N
ATOM 17 C5 A B 54 -41.902 28.469 -54.560 1.00 73.42 C
ATOM 18 C6 A B 54 -41.000 29.274 -53.846 1.00 70.94 C
ATOM 19 N6 A B 54 -41.307 30.352 -53.186 1.00 71.85 N
ATOM 20 N1 A B 54 -39.725 28.935 -53.813 1.00 71.11 N
ATOM 21 C2 A B 54 -39.372 27.828 -54.484 1.00 73.20 C
ATOM 22 N3 A B 54 -40.108 26.953 -55.184 1.00 73.91 N
ATOM 23 C4 A B 54 -41.385 27.333 -55.178 1.00 73.69 C
ATOM 24 P C B 55 -43.283 21.503 -58.654 1.00 82.10 P
ATOM 25 OP1 C B 55 -42.204 20.484 -58.631 1.00 82.60 O
ATOM 26 OP2 C B 55 -43.754 22.080 -59.931 1.00 84.52 O
ATOM 27 O5' C B 55 -44.555 20.908 -57.894 1.00 83.74 O
TER
Atoms:
C2: (-35.526,27.661,-53.133)
OP1: (-35.280,34.266,-49.645)
OP2: (-36.860,33.759,-47.607)
C4: (-33.494,26.676,-52.612)
O5': (-35.063,32.215,-48.201)
C3': (-36.975,29.733,-49.798)
C1': (-36.274,29.801,-52.083)
O4': (-35.664,30.843,-51.379)
C5': (-34.926,31.335,-49.315)
P: (-35.523,33.755,-48.271)
O2: (-36.592,27.665,-53.748)
C4': (-36.213,31.035,-50.061)
C2': (-37.453,29.363,-51.214)
O2': (-38.701,29.929,-51.636)
N1: (-35.262,28.725,-52.266)
N3: (-34.628,26.648,-53.295)
N4: (-32.628,25.673,-52.787)
C6: (-34.092,28.745,-51.584)
C5: (-33.201,27.761,-51.728)
O3': (-38.077,29.793,-48.846)
OP1: (-35.280,34.266,-49.645)
OP2: (-36.860,33.759,-47.607)
C4: (-33.494,26.676,-52.612)
O5': (-35.063,32.215,-48.201)
C3': (-36.975,29.733,-49.798)
C1': (-36.274,29.801,-52.083)
O4': (-35.664,30.843,-51.379)
C5': (-34.926,31.335,-49.315)
P: (-35.523,33.755,-48.271)
O2: (-36.592,27.665,-53.748)
C4': (-36.213,31.035,-50.061)
C2': (-37.453,29.363,-51.214)
O2': (-38.701,29.929,-51.636)
N1: (-35.262,28.725,-52.266)
N3: (-34.628,26.648,-53.295)
N4: (-32.628,25.673,-52.787)
C6: (-34.092,28.745,-51.584)
C5: (-33.201,27.761,-51.728)
O3': (-38.077,29.793,-48.846)
OP1: (-47.200,27.108,-59.947)
OP2: (-46.386,27.870,-57.690)
C3': (-43.665,23.855,-57.692)
C1': (-42.344,25.481,-56.589)
C5': (-44.183,25.461,-59.629)
O4': (-42.459,25.846,-57.947)
C8: (-43.519,27.466,-55.510)
O2': (-43.091,23.665,-55.324)
C6: (-41.000,29.274,-53.846)
C5: (-41.902,28.469,-54.560)
C4: (-41.385,27.333,-55.178)
P: (-46.069,27.276,-59.016)
C4': (-43.146,24.838,-58.724)
C2': (-43.504,24.550,-56.343)
C2: (-39.372,27.828,-54.484)
N1: (-39.725,28.935,-53.813)
N3: (-40.108,26.953,-55.184)
N6: (-41.307,30.352,-53.186)
N7: (-43.264,28.552,-54.779)
N9: (-42.423,26.687,-55.787)
O5': (-45.281,25.866,-58.851)
O3': (-42.830,22.724,-57.744)
OP2: (-46.386,27.870,-57.690)
C3': (-43.665,23.855,-57.692)
C1': (-42.344,25.481,-56.589)
C5': (-44.183,25.461,-59.629)
O4': (-42.459,25.846,-57.947)
C8: (-43.519,27.466,-55.510)
O2': (-43.091,23.665,-55.324)
C6: (-41.000,29.274,-53.846)
C5: (-41.902,28.469,-54.560)
C4: (-41.385,27.333,-55.178)
P: (-46.069,27.276,-59.016)
C4': (-43.146,24.838,-58.724)
C2': (-43.504,24.550,-56.343)
C2: (-39.372,27.828,-54.484)
N1: (-39.725,28.935,-53.813)
N3: (-40.108,26.953,-55.184)
N6: (-41.307,30.352,-53.186)
N7: (-43.264,28.552,-54.779)
N9: (-42.423,26.687,-55.787)
O5': (-45.281,25.866,-58.851)
O3': (-42.830,22.724,-57.744)
Image (generated by PyMOL):