Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0112:0101
Extra
PDB:
ATOM 1 O3' U A 111 73.168 158.419 41.862 1.00 54.65 O
ATOM 2 P C A 112 72.231 159.703 42.136 1.00 55.84 P
ATOM 3 OP1 C A 112 71.305 159.413 43.268 1.00 56.48 O
ATOM 4 OP2 C A 112 71.674 160.159 40.834 1.00 54.05 O
ATOM 5 O5' C A 112 73.260 160.805 42.629 1.00 54.98 O
ATOM 6 C5' C A 112 74.150 161.440 41.700 1.00 54.35 C
ATOM 7 C4' C A 112 75.547 161.393 42.235 1.00 52.95 C
ATOM 8 O4' C A 112 75.960 160.007 42.308 1.00 52.75 O
ATOM 9 C3' C A 112 76.623 162.025 41.381 1.00 53.34 C
ATOM 10 O3' C A 112 76.690 163.428 41.551 1.00 56.12 O
ATOM 11 C2' C A 112 77.870 161.351 41.924 1.00 52.22 C
ATOM 12 O2' C A 112 78.245 161.888 43.176 1.00 53.66 O
ATOM 13 C1' C A 112 77.363 159.922 42.112 1.00 49.79 C
ATOM 14 N1 C A 112 77.634 159.078 40.935 1.00 45.65 N
ATOM 15 C2 C A 112 78.932 158.622 40.735 1.00 45.10 C
ATOM 16 O2 C A 112 79.805 158.932 41.551 1.00 47.73 O
ATOM 17 N3 C A 112 79.209 157.860 39.662 1.00 42.82 N
ATOM 18 C4 C A 112 78.246 157.551 38.802 1.00 42.12 C
ATOM 19 N4 C A 112 78.570 156.796 37.759 1.00 42.57 N
ATOM 20 C5 C A 112 76.908 158.001 38.976 1.00 42.29 C
ATOM 21 C6 C A 112 76.647 158.752 40.049 1.00 44.21 C
ATOM 22 P U A 113 77.184 164.343 40.330 1.00 57.83 P
ATOM 23 OP1 U A 113 77.202 165.736 40.859 1.00 55.81 O
ATOM 24 OP2 U A 113 76.315 164.009 39.163 1.00 57.17 O
ATOM 25 O5' U A 113 78.680 163.850 40.029 1.00 54.38 O
TER
ATOM 1 O3' C B 100 74.252 156.748 35.987 1.00 48.61 O
ATOM 2 P C B 101 75.125 155.467 35.606 1.00 49.22 P
ATOM 3 OP1 C B 101 76.552 155.819 35.781 1.00 46.30 O
ATOM 4 OP2 C B 101 74.655 154.960 34.297 1.00 51.01 O
ATOM 5 O5' C B 101 74.722 154.405 36.721 1.00 50.27 O
ATOM 6 C5' C B 101 75.161 154.557 38.082 1.00 48.13 C
ATOM 7 C4' C B 101 74.559 153.476 38.949 1.00 47.45 C
ATOM 8 O4' C B 101 73.114 153.608 38.955 1.00 47.82 O
ATOM 9 C3' C B 101 74.802 152.037 38.513 1.00 44.22 C
ATOM 10 O3' C B 101 76.058 151.570 38.993 1.00 41.74 O
ATOM 11 C2' C B 101 73.672 151.304 39.214 1.00 46.78 C
ATOM 12 O2' C B 101 73.963 151.071 40.565 1.00 46.67 O
ATOM 13 C1' C B 101 72.534 152.328 39.140 1.00 50.70 C
ATOM 14 N1 C B 101 71.590 152.045 38.042 1.00 54.66 N
ATOM 15 C2 C B 101 70.657 151.004 38.212 1.00 54.60 C
ATOM 16 O2 C B 101 70.622 150.397 39.289 1.00 53.72 O
ATOM 17 N3 C B 101 69.818 150.695 37.198 1.00 55.67 N
ATOM 18 C4 C B 101 69.872 151.383 36.055 1.00 56.82 C
ATOM 19 N4 C B 101 69.035 151.032 35.078 1.00 58.25 N
ATOM 20 C5 C B 101 70.790 152.462 35.862 1.00 57.01 C
ATOM 21 C6 C B 101 71.623 152.756 36.872 1.00 56.00 C
ATOM 22 P G B 102 76.805 150.351 38.261 1.00 39.78 P
ATOM 23 OP1 G B 102 77.859 149.825 39.152 1.00 38.82 O
ATOM 24 OP2 G B 102 77.166 150.794 36.899 1.00 38.49 O
ATOM 25 O5' G B 102 75.691 149.219 38.171 1.00 45.82 O
TER
ATOM 2 P C A 112 72.231 159.703 42.136 1.00 55.84 P
ATOM 3 OP1 C A 112 71.305 159.413 43.268 1.00 56.48 O
ATOM 4 OP2 C A 112 71.674 160.159 40.834 1.00 54.05 O
ATOM 5 O5' C A 112 73.260 160.805 42.629 1.00 54.98 O
ATOM 6 C5' C A 112 74.150 161.440 41.700 1.00 54.35 C
ATOM 7 C4' C A 112 75.547 161.393 42.235 1.00 52.95 C
ATOM 8 O4' C A 112 75.960 160.007 42.308 1.00 52.75 O
ATOM 9 C3' C A 112 76.623 162.025 41.381 1.00 53.34 C
ATOM 10 O3' C A 112 76.690 163.428 41.551 1.00 56.12 O
ATOM 11 C2' C A 112 77.870 161.351 41.924 1.00 52.22 C
ATOM 12 O2' C A 112 78.245 161.888 43.176 1.00 53.66 O
ATOM 13 C1' C A 112 77.363 159.922 42.112 1.00 49.79 C
ATOM 14 N1 C A 112 77.634 159.078 40.935 1.00 45.65 N
ATOM 15 C2 C A 112 78.932 158.622 40.735 1.00 45.10 C
ATOM 16 O2 C A 112 79.805 158.932 41.551 1.00 47.73 O
ATOM 17 N3 C A 112 79.209 157.860 39.662 1.00 42.82 N
ATOM 18 C4 C A 112 78.246 157.551 38.802 1.00 42.12 C
ATOM 19 N4 C A 112 78.570 156.796 37.759 1.00 42.57 N
ATOM 20 C5 C A 112 76.908 158.001 38.976 1.00 42.29 C
ATOM 21 C6 C A 112 76.647 158.752 40.049 1.00 44.21 C
ATOM 22 P U A 113 77.184 164.343 40.330 1.00 57.83 P
ATOM 23 OP1 U A 113 77.202 165.736 40.859 1.00 55.81 O
ATOM 24 OP2 U A 113 76.315 164.009 39.163 1.00 57.17 O
ATOM 25 O5' U A 113 78.680 163.850 40.029 1.00 54.38 O
TER
ATOM 1 O3' C B 100 74.252 156.748 35.987 1.00 48.61 O
ATOM 2 P C B 101 75.125 155.467 35.606 1.00 49.22 P
ATOM 3 OP1 C B 101 76.552 155.819 35.781 1.00 46.30 O
ATOM 4 OP2 C B 101 74.655 154.960 34.297 1.00 51.01 O
ATOM 5 O5' C B 101 74.722 154.405 36.721 1.00 50.27 O
ATOM 6 C5' C B 101 75.161 154.557 38.082 1.00 48.13 C
ATOM 7 C4' C B 101 74.559 153.476 38.949 1.00 47.45 C
ATOM 8 O4' C B 101 73.114 153.608 38.955 1.00 47.82 O
ATOM 9 C3' C B 101 74.802 152.037 38.513 1.00 44.22 C
ATOM 10 O3' C B 101 76.058 151.570 38.993 1.00 41.74 O
ATOM 11 C2' C B 101 73.672 151.304 39.214 1.00 46.78 C
ATOM 12 O2' C B 101 73.963 151.071 40.565 1.00 46.67 O
ATOM 13 C1' C B 101 72.534 152.328 39.140 1.00 50.70 C
ATOM 14 N1 C B 101 71.590 152.045 38.042 1.00 54.66 N
ATOM 15 C2 C B 101 70.657 151.004 38.212 1.00 54.60 C
ATOM 16 O2 C B 101 70.622 150.397 39.289 1.00 53.72 O
ATOM 17 N3 C B 101 69.818 150.695 37.198 1.00 55.67 N
ATOM 18 C4 C B 101 69.872 151.383 36.055 1.00 56.82 C
ATOM 19 N4 C B 101 69.035 151.032 35.078 1.00 58.25 N
ATOM 20 C5 C B 101 70.790 152.462 35.862 1.00 57.01 C
ATOM 21 C6 C B 101 71.623 152.756 36.872 1.00 56.00 C
ATOM 22 P G B 102 76.805 150.351 38.261 1.00 39.78 P
ATOM 23 OP1 G B 102 77.859 149.825 39.152 1.00 38.82 O
ATOM 24 OP2 G B 102 77.166 150.794 36.899 1.00 38.49 O
ATOM 25 O5' G B 102 75.691 149.219 38.171 1.00 45.82 O
TER
Atoms:
C2: (78.932,158.622,40.735)
OP1: (71.305,159.413,43.268)
OP2: (71.674,160.159,40.834)
C4: (78.246,157.551,38.802)
O5': (73.260,160.805,42.629)
C3': (76.623,162.025,41.381)
C1': (77.363,159.922,42.112)
O4': (75.960,160.007,42.308)
C5': (74.150,161.440,41.700)
P: (72.231,159.703,42.136)
O2: (79.805,158.932,41.551)
C4': (75.547,161.393,42.235)
C2': (77.870,161.351,41.924)
O2': (78.245,161.888,43.176)
N1: (77.634,159.078,40.935)
N3: (79.209,157.860,39.662)
N4: (78.570,156.796,37.759)
C6: (76.647,158.752,40.049)
C5: (76.908,158.001,38.976)
O3': (76.690,163.428,41.551)
OP1: (71.305,159.413,43.268)
OP2: (71.674,160.159,40.834)
C4: (78.246,157.551,38.802)
O5': (73.260,160.805,42.629)
C3': (76.623,162.025,41.381)
C1': (77.363,159.922,42.112)
O4': (75.960,160.007,42.308)
C5': (74.150,161.440,41.700)
P: (72.231,159.703,42.136)
O2: (79.805,158.932,41.551)
C4': (75.547,161.393,42.235)
C2': (77.870,161.351,41.924)
O2': (78.245,161.888,43.176)
N1: (77.634,159.078,40.935)
N3: (79.209,157.860,39.662)
N4: (78.570,156.796,37.759)
C6: (76.647,158.752,40.049)
C5: (76.908,158.001,38.976)
O3': (76.690,163.428,41.551)
C2: (70.657,151.004,38.212)
OP1: (76.552,155.819,35.781)
OP2: (74.655,154.960,34.297)
C4: (69.872,151.383,36.055)
O5': (74.722,154.405,36.721)
C3': (74.802,152.037,38.513)
C1': (72.534,152.328,39.140)
O4': (73.114,153.608,38.955)
C5': (75.161,154.557,38.082)
P: (75.125,155.467,35.606)
O2: (70.622,150.397,39.289)
C4': (74.559,153.476,38.949)
C2': (73.672,151.304,39.214)
O2': (73.963,151.071,40.565)
N1: (71.590,152.045,38.042)
N3: (69.818,150.695,37.198)
N4: (69.035,151.032,35.078)
C6: (71.623,152.756,36.872)
C5: (70.790,152.462,35.862)
O3': (76.058,151.570,38.993)
OP1: (76.552,155.819,35.781)
OP2: (74.655,154.960,34.297)
C4: (69.872,151.383,36.055)
O5': (74.722,154.405,36.721)
C3': (74.802,152.037,38.513)
C1': (72.534,152.328,39.140)
O4': (73.114,153.608,38.955)
C5': (75.161,154.557,38.082)
P: (75.125,155.467,35.606)
O2: (70.622,150.397,39.289)
C4': (74.559,153.476,38.949)
C2': (73.672,151.304,39.214)
O2': (73.963,151.071,40.565)
N1: (71.590,152.045,38.042)
N3: (69.818,150.695,37.198)
N4: (69.035,151.032,35.078)
C6: (71.623,152.756,36.872)
C5: (70.790,152.462,35.862)
O3': (76.058,151.570,38.993)
Image (generated by PyMOL):