ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1L8V:B85:B65

Extra

PDB:
ATOM 1 O3' A A 84 -50.308 -65.333 70.441 1.00 99.28 O
ATOM 2 P G A 85 -48.898 -64.590 70.222 1.00102.83 P
ATOM 3 OP1 G A 85 -49.289 -63.252 69.724 1.00102.32 O
ATOM 4 OP2 G A 85 -47.919 -65.417 69.419 1.00103.65 O
ATOM 5 O5' G A 85 -48.293 -64.494 71.695 1.00100.92 O
ATOM 6 C5' G A 85 -48.890 -63.667 72.676 1.00 99.31 C
ATOM 7 C4' G A 85 -48.698 -64.273 74.033 1.00 98.56 C
ATOM 8 O4' G A 85 -47.294 -64.526 74.284 1.00 97.69 O
ATOM 9 C3' G A 85 -49.121 -63.344 75.156 1.00 98.23 C
ATOM 10 O3' G A 85 -50.450 -63.745 75.427 1.00100.49 O
ATOM 11 C2' G A 85 -48.315 -63.849 76.342 1.00 97.52 C
ATOM 12 O2' G A 85 -49.001 -64.922 76.940 1.00 97.03 O
ATOM 13 C1' G A 85 -47.062 -64.394 75.667 1.00 97.43 C
ATOM 14 N9 G A 85 -45.695 -63.957 75.951 1.00 96.40 N
ATOM 15 C8 G A 85 -44.713 -64.766 76.472 1.00 95.08 C
ATOM 16 N7 G A 85 -43.557 -64.171 76.583 1.00 95.34 N
ATOM 17 C5 G A 85 -43.787 -62.885 76.121 1.00 96.42 C
ATOM 18 C6 G A 85 -42.901 -61.795 76.005 1.00 95.34 C
ATOM 19 O6 G A 85 -41.692 -61.753 76.292 1.00 96.43 O
ATOM 20 N1 G A 85 -43.547 -60.668 75.498 1.00 94.29 N
ATOM 21 C2 G A 85 -44.874 -60.607 75.151 1.00 94.85 C
ATOM 22 N2 G A 85 -45.307 -59.440 74.683 1.00 94.16 N
ATOM 23 N3 G A 85 -45.713 -61.622 75.254 1.00 96.45 N
ATOM 24 C4 G A 85 -45.108 -62.725 75.741 1.00 96.62 C
ATOM 25 P C A 86 -51.625 -62.669 75.530 1.00101.13 P
ATOM 26 OP1 C A 86 -51.354 -61.608 74.536 1.00101.19 O
ATOM 27 OP2 C A 86 -51.787 -62.340 76.965 1.00100.02 O
ATOM 28 O5' C A 86 -52.913 -63.456 75.030 1.00102.29 O
TER

ATOM 1 O3' U B 64 -36.151 -62.213 79.059 1.00 82.74 O
ATOM 2 P U B 65 -36.759 -60.740 78.682 1.00 85.51 P
ATOM 3 OP1 U B 65 -38.060 -60.590 79.354 1.00 85.00 O
ATOM 4 OP2 U B 65 -36.681 -60.647 77.206 1.00 82.16 O
ATOM 5 O5' U B 65 -35.781 -59.603 79.194 1.00 88.56 O
ATOM 6 C5' U B 65 -34.950 -58.875 78.276 1.00 93.26 C
ATOM 7 C4' U B 65 -35.530 -57.497 77.972 1.00 95.98 C
ATOM 8 O4' U B 65 -36.582 -57.607 76.998 1.00 97.04 O
ATOM 9 C3' U B 65 -36.170 -56.769 79.154 1.00 97.45 C
ATOM 10 O3' U B 65 -35.120 -56.102 79.915 1.00 98.29 O
ATOM 11 C2' U B 65 -37.213 -55.847 78.522 1.00 97.33 C
ATOM 12 O2' U B 65 -36.754 -54.562 78.197 1.00 98.67 O
ATOM 13 C1' U B 65 -37.549 -56.610 77.244 1.00 97.63 C
ATOM 14 N1 U B 65 -38.873 -57.083 76.823 1.00 98.53 N
ATOM 15 C2 U B 65 -39.669 -56.176 76.175 1.00 99.34 C
ATOM 16 O2 U B 65 -39.365 -54.998 76.063 1.00100.73 O
ATOM 17 N3 U B 65 -40.827 -56.691 75.646 1.00 99.94 N
ATOM 18 C4 U B 65 -41.262 -57.985 75.711 1.00 98.59 C
ATOM 19 O4 U B 65 -42.297 -58.302 75.129 1.00 98.93 O
ATOM 20 C5 U B 65 -40.408 -58.858 76.446 1.00 98.87 C
ATOM 21 C6 U B 65 -39.275 -58.385 76.978 1.00 98.98 C
ATOM 22 P G B 66 -34.205 -54.900 79.274 1.00 96.20 P
ATOM 23 OP1 G B 66 -32.947 -55.005 80.047 1.00 97.24 O
ATOM 24 OP2 G B 66 -34.923 -53.609 79.227 1.00 94.77 O
ATOM 25 O5' G B 66 -33.832 -55.280 77.769 1.00 94.98 O
TER

Atoms:
OP1: (-49.289,-63.252,69.724)
OP2: (-47.919,-65.417,69.419)
C3': (-49.121,-63.344,75.156)
C1': (-47.062,-64.394,75.667)
C5': (-48.890,-63.667,72.676)
O6: (-41.692,-61.753,76.292)
O4': (-47.294,-64.526,74.284)
C8: (-44.713,-64.766,76.472)
C2: (-44.874,-60.607,75.151)
C6: (-42.901,-61.795,76.005)
C5: (-43.787,-62.885,76.121)
C4: (-45.108,-62.725,75.741)
P: (-48.898,-64.590,70.222)
C4': (-48.698,-64.273,74.033)
C2': (-48.315,-63.849,76.342)
O2': (-49.001,-64.922,76.940)
N1: (-43.547,-60.668,75.498)
N2: (-45.307,-59.440,74.683)
N3: (-45.713,-61.622,75.254)
N7: (-43.557,-64.171,76.583)
N9: (-45.695,-63.957,75.951)
O5': (-48.293,-64.494,71.695)
O3': (-50.450,-63.745,75.427)
C4: (-41.262,-57.985,75.711)
N3: (-40.827,-56.691,75.646)
OP1: (-38.060,-60.590,79.354)
OP2: (-36.681,-60.647,77.206)
C2: (-39.669,-56.176,76.175)
C1': (-37.549,-56.610,77.244)
C3': (-36.170,-56.769,79.154)
O5': (-35.781,-59.603,79.194)
O4': (-36.582,-57.607,76.998)
C5': (-34.950,-58.875,78.276)
P: (-36.759,-60.740,78.682)
C4': (-35.530,-57.497,77.972)
C2': (-37.213,-55.847,78.522)
O2': (-36.754,-54.562,78.197)
N1: (-38.873,-57.083,76.823)
O4: (-42.297,-58.302,75.129)
O2: (-39.365,-54.998,76.063)
C6: (-39.275,-58.385,76.978)
C5: (-40.408,-58.858,76.446)
O3': (-35.120,-56.102,79.915)
Image (generated by PyMOL):
PyMOL image
show in jmol