Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:S119:S100
Extra
PDB:
ATOM 1 O3' G A 118 -35.020 -44.683 86.235 1.00 67.69 O
ATOM 2 P G A 119 -35.477 -43.153 86.124 1.00 67.53 P
ATOM 3 OP1 G A 119 -36.943 -43.123 85.924 1.00 67.86 O
ATOM 4 OP2 G A 119 -34.607 -42.465 85.143 1.00 67.51 O
ATOM 5 O5' G A 119 -35.161 -42.615 87.596 1.00 67.37 O
ATOM 6 C5' G A 119 -35.808 -43.206 88.719 1.00 67.51 C
ATOM 7 C4' G A 119 -35.013 -42.995 89.995 1.00 67.72 C
ATOM 8 O4' G A 119 -33.678 -43.537 89.846 1.00 67.41 O
ATOM 9 C3' G A 119 -34.781 -41.545 90.389 1.00 67.89 C
ATOM 10 O3' G A 119 -35.925 -41.025 91.063 1.00 68.71 O
ATOM 11 C2' G A 119 -33.563 -41.667 91.302 1.00 67.57 C
ATOM 12 O2' G A 119 -33.886 -42.042 92.630 1.00 67.60 O
ATOM 13 C1' G A 119 -32.765 -42.773 90.613 1.00 67.26 C
ATOM 14 N9 G A 119 -31.687 -42.278 89.752 1.00 66.91 N
ATOM 15 C8 G A 119 -31.671 -42.185 88.378 1.00 66.76 C
ATOM 16 N7 G A 119 -30.557 -41.705 87.896 1.00 66.36 N
ATOM 17 C5 G A 119 -29.777 -41.462 89.019 1.00 66.20 C
ATOM 18 C6 G A 119 -28.461 -40.938 89.135 1.00 66.05 C
ATOM 19 O6 G A 119 -27.696 -40.571 88.230 1.00 65.76 O
ATOM 20 N1 G A 119 -28.046 -40.856 90.467 1.00 65.97 N
ATOM 21 C2 G A 119 -28.814 -41.234 91.547 1.00 66.26 C
ATOM 22 N2 G A 119 -28.274 -41.094 92.763 1.00 66.27 N
ATOM 23 N3 G A 119 -30.042 -41.723 91.451 1.00 66.51 N
ATOM 24 C4 G A 119 -30.460 -41.810 90.165 1.00 66.50 C
ATOM 25 P A A 120 -36.848 -39.904 90.383 1.00 69.41 P
ATOM 26 OP1 A A 120 -37.649 -39.292 91.470 1.00 69.48 O
ATOM 27 OP2 A A 120 -37.547 -40.509 89.226 1.00 69.27 O
ATOM 28 O5' A A 120 -35.786 -38.832 89.830 1.00 69.41 O
TER
ATOM 1 O3' A B 99 -19.672 -40.455 88.202 1.00 60.38 O
ATOM 2 P U B 100 -20.084 -41.828 88.921 1.00 61.00 P
ATOM 3 OP1 U B 100 -18.964 -42.774 88.710 1.00 61.13 O
ATOM 4 OP2 U B 100 -21.448 -42.185 88.464 1.00 60.85 O
ATOM 5 O5' U B 100 -20.175 -41.475 90.486 1.00 61.25 O
ATOM 6 C5' U B 100 -18.996 -41.278 91.272 1.00 61.77 C
ATOM 7 C4' U B 100 -19.312 -40.858 92.700 1.00 62.05 C
ATOM 8 O4' U B 100 -20.295 -39.790 92.743 1.00 62.15 O
ATOM 9 C3' U B 100 -19.956 -41.919 93.573 1.00 62.31 C
ATOM 10 O3' U B 100 -19.011 -42.889 94.003 1.00 62.60 O
ATOM 11 C2' U B 100 -20.475 -41.071 94.730 1.00 62.30 C
ATOM 12 O2' U B 100 -19.489 -40.755 95.698 1.00 62.48 O
ATOM 13 C1' U B 100 -20.955 -39.814 94.001 1.00 61.99 C
ATOM 14 N1 U B 100 -22.444 -39.815 93.809 1.00 61.83 N
ATOM 15 C2 U B 100 -23.284 -39.632 94.903 1.00 61.95 C
ATOM 16 O2 U B 100 -22.904 -39.458 96.048 1.00 62.14 O
ATOM 17 N3 U B 100 -24.625 -39.661 94.614 1.00 62.08 N
ATOM 18 C4 U B 100 -25.203 -39.852 93.372 1.00 62.17 C
ATOM 19 O4 U B 100 -26.422 -39.850 93.280 1.00 62.43 O
ATOM 20 C5 U B 100 -24.278 -40.038 92.280 1.00 61.87 C
ATOM 21 C6 U B 100 -22.963 -40.014 92.538 1.00 61.83 C
ATOM 22 P C B 101 -19.400 -44.443 94.017 1.00 62.80 P
ATOM 23 OP1 C B 101 -18.566 -45.080 95.062 1.00 62.88 O
ATOM 24 OP2 C B 101 -19.315 -44.926 92.620 1.00 62.56 O
ATOM 25 O5' C B 101 -20.941 -44.482 94.470 1.00 62.95 O
TER
ATOM 2 P G A 119 -35.477 -43.153 86.124 1.00 67.53 P
ATOM 3 OP1 G A 119 -36.943 -43.123 85.924 1.00 67.86 O
ATOM 4 OP2 G A 119 -34.607 -42.465 85.143 1.00 67.51 O
ATOM 5 O5' G A 119 -35.161 -42.615 87.596 1.00 67.37 O
ATOM 6 C5' G A 119 -35.808 -43.206 88.719 1.00 67.51 C
ATOM 7 C4' G A 119 -35.013 -42.995 89.995 1.00 67.72 C
ATOM 8 O4' G A 119 -33.678 -43.537 89.846 1.00 67.41 O
ATOM 9 C3' G A 119 -34.781 -41.545 90.389 1.00 67.89 C
ATOM 10 O3' G A 119 -35.925 -41.025 91.063 1.00 68.71 O
ATOM 11 C2' G A 119 -33.563 -41.667 91.302 1.00 67.57 C
ATOM 12 O2' G A 119 -33.886 -42.042 92.630 1.00 67.60 O
ATOM 13 C1' G A 119 -32.765 -42.773 90.613 1.00 67.26 C
ATOM 14 N9 G A 119 -31.687 -42.278 89.752 1.00 66.91 N
ATOM 15 C8 G A 119 -31.671 -42.185 88.378 1.00 66.76 C
ATOM 16 N7 G A 119 -30.557 -41.705 87.896 1.00 66.36 N
ATOM 17 C5 G A 119 -29.777 -41.462 89.019 1.00 66.20 C
ATOM 18 C6 G A 119 -28.461 -40.938 89.135 1.00 66.05 C
ATOM 19 O6 G A 119 -27.696 -40.571 88.230 1.00 65.76 O
ATOM 20 N1 G A 119 -28.046 -40.856 90.467 1.00 65.97 N
ATOM 21 C2 G A 119 -28.814 -41.234 91.547 1.00 66.26 C
ATOM 22 N2 G A 119 -28.274 -41.094 92.763 1.00 66.27 N
ATOM 23 N3 G A 119 -30.042 -41.723 91.451 1.00 66.51 N
ATOM 24 C4 G A 119 -30.460 -41.810 90.165 1.00 66.50 C
ATOM 25 P A A 120 -36.848 -39.904 90.383 1.00 69.41 P
ATOM 26 OP1 A A 120 -37.649 -39.292 91.470 1.00 69.48 O
ATOM 27 OP2 A A 120 -37.547 -40.509 89.226 1.00 69.27 O
ATOM 28 O5' A A 120 -35.786 -38.832 89.830 1.00 69.41 O
TER
ATOM 1 O3' A B 99 -19.672 -40.455 88.202 1.00 60.38 O
ATOM 2 P U B 100 -20.084 -41.828 88.921 1.00 61.00 P
ATOM 3 OP1 U B 100 -18.964 -42.774 88.710 1.00 61.13 O
ATOM 4 OP2 U B 100 -21.448 -42.185 88.464 1.00 60.85 O
ATOM 5 O5' U B 100 -20.175 -41.475 90.486 1.00 61.25 O
ATOM 6 C5' U B 100 -18.996 -41.278 91.272 1.00 61.77 C
ATOM 7 C4' U B 100 -19.312 -40.858 92.700 1.00 62.05 C
ATOM 8 O4' U B 100 -20.295 -39.790 92.743 1.00 62.15 O
ATOM 9 C3' U B 100 -19.956 -41.919 93.573 1.00 62.31 C
ATOM 10 O3' U B 100 -19.011 -42.889 94.003 1.00 62.60 O
ATOM 11 C2' U B 100 -20.475 -41.071 94.730 1.00 62.30 C
ATOM 12 O2' U B 100 -19.489 -40.755 95.698 1.00 62.48 O
ATOM 13 C1' U B 100 -20.955 -39.814 94.001 1.00 61.99 C
ATOM 14 N1 U B 100 -22.444 -39.815 93.809 1.00 61.83 N
ATOM 15 C2 U B 100 -23.284 -39.632 94.903 1.00 61.95 C
ATOM 16 O2 U B 100 -22.904 -39.458 96.048 1.00 62.14 O
ATOM 17 N3 U B 100 -24.625 -39.661 94.614 1.00 62.08 N
ATOM 18 C4 U B 100 -25.203 -39.852 93.372 1.00 62.17 C
ATOM 19 O4 U B 100 -26.422 -39.850 93.280 1.00 62.43 O
ATOM 20 C5 U B 100 -24.278 -40.038 92.280 1.00 61.87 C
ATOM 21 C6 U B 100 -22.963 -40.014 92.538 1.00 61.83 C
ATOM 22 P C B 101 -19.400 -44.443 94.017 1.00 62.80 P
ATOM 23 OP1 C B 101 -18.566 -45.080 95.062 1.00 62.88 O
ATOM 24 OP2 C B 101 -19.315 -44.926 92.620 1.00 62.56 O
ATOM 25 O5' C B 101 -20.941 -44.482 94.470 1.00 62.95 O
TER
Atoms:
OP1: (-36.943,-43.123,85.924)
OP2: (-34.607,-42.465,85.143)
C3': (-34.781,-41.545,90.389)
C1': (-32.765,-42.773,90.613)
C5': (-35.808,-43.206,88.719)
O6: (-27.696,-40.571,88.230)
O4': (-33.678,-43.537,89.846)
C8: (-31.671,-42.185,88.378)
C2: (-28.814,-41.234,91.547)
C6: (-28.461,-40.938,89.135)
C5: (-29.777,-41.462,89.019)
C4: (-30.460,-41.810,90.165)
P: (-35.477,-43.153,86.124)
C4': (-35.013,-42.995,89.995)
C2': (-33.563,-41.667,91.302)
O2': (-33.886,-42.042,92.630)
N1: (-28.046,-40.856,90.467)
N2: (-28.274,-41.094,92.763)
N3: (-30.042,-41.723,91.451)
N7: (-30.557,-41.705,87.896)
N9: (-31.687,-42.278,89.752)
O5': (-35.161,-42.615,87.596)
O3': (-35.925,-41.025,91.063)
OP2: (-34.607,-42.465,85.143)
C3': (-34.781,-41.545,90.389)
C1': (-32.765,-42.773,90.613)
C5': (-35.808,-43.206,88.719)
O6: (-27.696,-40.571,88.230)
O4': (-33.678,-43.537,89.846)
C8: (-31.671,-42.185,88.378)
C2: (-28.814,-41.234,91.547)
C6: (-28.461,-40.938,89.135)
C5: (-29.777,-41.462,89.019)
C4: (-30.460,-41.810,90.165)
P: (-35.477,-43.153,86.124)
C4': (-35.013,-42.995,89.995)
C2': (-33.563,-41.667,91.302)
O2': (-33.886,-42.042,92.630)
N1: (-28.046,-40.856,90.467)
N2: (-28.274,-41.094,92.763)
N3: (-30.042,-41.723,91.451)
N7: (-30.557,-41.705,87.896)
N9: (-31.687,-42.278,89.752)
O5': (-35.161,-42.615,87.596)
O3': (-35.925,-41.025,91.063)
C4: (-25.203,-39.852,93.372)
N3: (-24.625,-39.661,94.614)
OP1: (-18.964,-42.774,88.710)
OP2: (-21.448,-42.185,88.464)
C2: (-23.284,-39.632,94.903)
C1': (-20.955,-39.814,94.001)
C3': (-19.956,-41.919,93.573)
O5': (-20.175,-41.475,90.486)
O4': (-20.295,-39.790,92.743)
C5': (-18.996,-41.278,91.272)
P: (-20.084,-41.828,88.921)
C4': (-19.312,-40.858,92.700)
C2': (-20.475,-41.071,94.730)
O2': (-19.489,-40.755,95.698)
N1: (-22.444,-39.815,93.809)
O4: (-26.422,-39.850,93.280)
O2: (-22.904,-39.458,96.048)
C6: (-22.963,-40.014,92.538)
C5: (-24.278,-40.038,92.280)
O3': (-19.011,-42.889,94.003)
N3: (-24.625,-39.661,94.614)
OP1: (-18.964,-42.774,88.710)
OP2: (-21.448,-42.185,88.464)
C2: (-23.284,-39.632,94.903)
C1': (-20.955,-39.814,94.001)
C3': (-19.956,-41.919,93.573)
O5': (-20.175,-41.475,90.486)
O4': (-20.295,-39.790,92.743)
C5': (-18.996,-41.278,91.272)
P: (-20.084,-41.828,88.921)
C4': (-19.312,-40.858,92.700)
C2': (-20.475,-41.071,94.730)
O2': (-19.489,-40.755,95.698)
N1: (-22.444,-39.815,93.809)
O4: (-26.422,-39.850,93.280)
O2: (-22.904,-39.458,96.048)
C6: (-22.963,-40.014,92.538)
C5: (-24.278,-40.038,92.280)
O3': (-19.011,-42.889,94.003)
Image (generated by PyMOL):