ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:0871:0868

Extra

PDB:
ATOM 1 O3' U A 870 75.954 132.756 74.561 1.00 29.39 O
ATOM 2 P C A 871 76.948 132.894 75.817 1.00 28.79 P
ATOM 3 OP1 C A 871 76.182 132.555 77.042 1.00 23.70 O
ATOM 4 OP2 C A 871 77.653 134.197 75.724 1.00 28.84 O
ATOM 5 O5' C A 871 78.027 131.753 75.581 1.00 25.66 O
ATOM 6 C5' C A 871 77.643 130.381 75.489 1.00 22.60 C
ATOM 7 C4' C A 871 78.776 129.574 74.916 1.00 23.82 C
ATOM 8 O4' C A 871 78.951 129.913 73.514 1.00 25.28 O
ATOM 9 C3' C A 871 80.131 129.802 75.578 1.00 25.81 C
ATOM 10 O3' C A 871 80.858 128.588 75.578 1.00 25.54 O
ATOM 11 C2' C A 871 80.789 130.814 74.647 1.00 26.63 C
ATOM 12 O2' C A 871 82.196 130.777 74.667 1.00 30.69 O
ATOM 13 C1' C A 871 80.283 130.337 73.294 1.00 25.99 C
ATOM 14 N1 C A 871 80.294 131.369 72.241 1.00 25.90 N
ATOM 15 C2 C A 871 81.036 131.132 71.081 1.00 26.58 C
ATOM 16 O2 C A 871 81.676 130.075 70.984 1.00 29.58 O
ATOM 17 N3 C A 871 81.046 132.058 70.100 1.00 24.53 N
ATOM 18 C4 C A 871 80.371 133.194 70.254 1.00 26.30 C
ATOM 19 N4 C A 871 80.430 134.096 69.272 1.00 28.41 N
ATOM 20 C5 C A 871 79.611 133.465 71.424 1.00 26.74 C
ATOM 21 C6 C A 871 79.597 132.534 72.383 1.00 26.26 C
ATOM 22 P G A 872 81.117 127.827 76.964 1.00 28.36 P
ATOM 23 OP1 G A 872 79.813 127.370 77.517 1.00 27.73 O
ATOM 24 OP2 G A 872 81.986 128.701 77.778 1.00 27.99 O
ATOM 25 O5' G A 872 81.947 126.531 76.557 1.00 28.61 O
TER

ATOM 1 O3' C B 867 81.260 138.236 68.140 1.00 29.00 O
ATOM 2 P C B 868 79.722 137.804 67.999 1.00 27.13 P
ATOM 3 OP1 C B 868 79.429 136.738 68.988 1.00 27.19 O
ATOM 4 OP2 C B 868 79.456 137.559 66.560 1.00 25.55 O
ATOM 5 O5' C B 868 78.963 139.124 68.444 1.00 24.10 O
ATOM 6 C5' C B 868 79.175 139.672 69.748 1.00 24.94 C
ATOM 7 C4' C B 868 78.222 140.814 69.996 1.00 26.65 C
ATOM 8 O4' C B 868 78.597 141.944 69.162 1.00 26.17 O
ATOM 9 C3' C B 868 76.760 140.521 69.689 1.00 26.63 C
ATOM 10 O3' C B 868 75.942 141.192 70.625 1.00 27.89 O
ATOM 11 C2' C B 868 76.581 141.105 68.294 1.00 26.28 C
ATOM 12 O2' C B 868 75.249 141.491 68.017 1.00 25.24 O
ATOM 13 C1' C B 868 77.513 142.316 68.341 1.00 24.74 C
ATOM 14 N1 C B 868 78.042 142.676 67.013 1.00 25.43 N
ATOM 15 C2 C B 868 77.658 143.896 66.444 1.00 27.96 C
ATOM 16 O2 C B 868 76.978 144.685 67.120 1.00 31.48 O
ATOM 17 N3 C B 868 78.047 144.192 65.174 1.00 27.74 N
ATOM 18 C4 C B 868 78.809 143.327 64.492 1.00 27.08 C
ATOM 19 N4 C B 868 79.117 143.623 63.221 1.00 24.32 N
ATOM 20 C5 C B 868 79.274 142.109 65.078 1.00 25.75 C
ATOM 21 C6 C B 868 78.868 141.826 66.327 1.00 25.45 C
ATOM 22 P A B 869 74.735 140.402 71.318 1.00 27.88 P
ATOM 23 OP1 A B 869 75.223 139.033 71.618 1.00 30.30 O
ATOM 24 OP2 A B 869 73.512 140.584 70.507 1.00 29.46 O
ATOM 25 O5' A B 869 74.517 141.168 72.692 1.00 28.98 O
TER

Atoms:
C2: (81.036,131.132,71.081)
OP1: (76.182,132.555,77.042)
OP2: (77.653,134.197,75.724)
C4: (80.371,133.194,70.254)
O5': (78.027,131.753,75.581)
C3': (80.131,129.802,75.578)
C1': (80.283,130.337,73.294)
O4': (78.951,129.913,73.514)
C5': (77.643,130.381,75.489)
P: (76.948,132.894,75.817)
O2: (81.676,130.075,70.984)
C4': (78.776,129.574,74.916)
C2': (80.789,130.814,74.647)
O2': (82.196,130.777,74.667)
N1: (80.294,131.369,72.241)
N3: (81.046,132.058,70.100)
N4: (80.430,134.096,69.272)
C6: (79.597,132.534,72.383)
C5: (79.611,133.465,71.424)
O3': (80.858,128.588,75.578)
C2: (77.658,143.896,66.444)
OP1: (79.429,136.738,68.988)
OP2: (79.456,137.559,66.560)
C4: (78.809,143.327,64.492)
O5': (78.963,139.124,68.444)
C3': (76.760,140.521,69.689)
C1': (77.513,142.316,68.341)
O4': (78.597,141.944,69.162)
C5': (79.175,139.672,69.748)
P: (79.722,137.804,67.999)
O2: (76.978,144.685,67.120)
C4': (78.222,140.814,69.996)
C2': (76.581,141.105,68.294)
O2': (75.249,141.491,68.017)
N1: (78.042,142.676,67.013)
N3: (78.047,144.192,65.174)
N4: (79.117,143.623,63.221)
C6: (78.868,141.826,66.327)
C5: (79.274,142.109,65.078)
O3': (75.942,141.192,70.625)
Image (generated by PyMOL):
PyMOL image
show in jmol