Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:A19:A17
Extra
PDB:
ATOM 1 O3' U A 18 -6.373 -37.781 25.549 1.00 60.81 O
ATOM 2 P C A 19 -7.122 -38.521 24.316 1.00 67.78 P
ATOM 3 OP1 C A 19 -6.427 -39.840 24.071 1.00 60.50 O
ATOM 4 OP2 C A 19 -7.278 -37.599 23.206 1.00 51.56 O
ATOM 5 O5' C A 19 -8.601 -38.837 24.879 1.00 60.54 O
ATOM 6 C5' C A 19 -9.425 -37.782 25.471 1.00 58.05 C
ATOM 7 C4' C A 19 -10.825 -38.367 25.682 1.00 57.10 C
ATOM 8 O4' C A 19 -10.737 -39.780 26.027 1.00 55.73 O
ATOM 9 C3' C A 19 -11.678 -37.733 26.784 1.00 57.36 C
ATOM 10 O3' C A 19 -12.388 -36.625 26.263 1.00 51.38 O
ATOM 11 C2' C A 19 -12.630 -38.902 27.113 1.00 59.38 C
ATOM 12 O2' C A 19 -13.820 -38.893 26.336 1.00 63.41 O
ATOM 13 C1' C A 19 -11.833 -40.186 26.848 1.00 54.22 C
ATOM 14 N1 C A 19 -11.384 -40.670 28.195 1.00 54.19 N
ATOM 15 C2 C A 19 -12.382 -40.956 29.176 1.00 51.49 C
ATOM 16 O2 C A 19 -13.585 -40.850 28.843 1.00 49.20 O
ATOM 17 N3 C A 19 -11.989 -41.342 30.437 1.00 50.06 N
ATOM 18 C4 C A 19 -10.678 -41.436 30.716 1.00 45.40 C
ATOM 19 N4 C A 19 -10.322 -41.798 31.934 1.00 48.45 N
ATOM 20 C5 C A 19 -9.659 -41.136 29.757 1.00 48.54 C
ATOM 21 C6 C A 19 -10.043 -40.754 28.520 1.00 51.63 C
ATOM 22 P A A 20 -12.463 -35.198 27.043 1.00 63.12 P
ATOM 23 OP1 A A 20 -12.867 -34.165 26.043 1.00 55.08 O
ATOM 24 OP2 A A 20 -11.193 -35.050 27.813 1.00 55.12 O
ATOM 25 O5' A A 20 -13.680 -35.380 28.084 1.00 61.21 O
TER
ATOM 1 O3' G B 16 -2.771 -40.331 35.936 1.00 58.71 O
ATOM 2 P U B 17 -3.783 -41.592 35.997 1.00 66.96 P
ATOM 3 OP1 U B 17 -5.013 -41.044 36.623 1.00 58.84 O
ATOM 4 OP2 U B 17 -3.083 -42.783 36.591 1.00 62.37 O
ATOM 5 O5' U B 17 -4.163 -41.996 34.495 1.00 59.77 O
ATOM 6 C5' U B 17 -3.276 -42.779 33.709 1.00 52.94 C
ATOM 7 C4' U B 17 -4.050 -43.415 32.556 1.00 60.46 C
ATOM 8 O4' U B 17 -4.948 -44.465 33.039 1.00 57.69 O
ATOM 9 C3' U B 17 -4.942 -42.484 31.744 1.00 57.30 C
ATOM 10 O3' U B 17 -5.033 -42.974 30.413 1.00 58.27 O
ATOM 11 C2' U B 17 -6.283 -42.652 32.447 1.00 55.45 C
ATOM 12 O2' U B 17 -7.384 -42.204 31.656 1.00 55.12 O
ATOM 13 C1' U B 17 -6.276 -44.160 32.693 1.00 56.37 C
ATOM 14 N1 U B 17 -7.115 -44.410 33.877 1.00 61.28 N
ATOM 15 C2 U B 17 -8.436 -44.803 33.699 1.00 53.70 C
ATOM 16 O2 U B 17 -8.931 -45.000 32.588 1.00 50.22 O
ATOM 17 N3 U B 17 -9.116 -44.954 34.890 1.00 50.64 N
ATOM 18 C4 U B 17 -8.613 -44.761 36.180 1.00 59.41 C
ATOM 19 O4 U B 17 -9.339 -44.938 37.170 1.00 62.07 O
ATOM 20 C5 U B 17 -7.236 -44.317 36.262 1.00 57.44 C
ATOM 21 C6 U B 17 -6.555 -44.174 35.126 1.00 59.96 C
ATOM 22 P U B 18 -4.124 -42.271 29.287 1.00 65.37 P
ATOM 23 OP1 U B 18 -4.187 -43.154 28.096 1.00 62.43 O
ATOM 24 OP2 U B 18 -2.823 -42.007 29.965 1.00 57.92 O
ATOM 25 O5' U B 18 -4.925 -40.948 28.801 1.00 57.19 O
TER
ATOM 2 P C A 19 -7.122 -38.521 24.316 1.00 67.78 P
ATOM 3 OP1 C A 19 -6.427 -39.840 24.071 1.00 60.50 O
ATOM 4 OP2 C A 19 -7.278 -37.599 23.206 1.00 51.56 O
ATOM 5 O5' C A 19 -8.601 -38.837 24.879 1.00 60.54 O
ATOM 6 C5' C A 19 -9.425 -37.782 25.471 1.00 58.05 C
ATOM 7 C4' C A 19 -10.825 -38.367 25.682 1.00 57.10 C
ATOM 8 O4' C A 19 -10.737 -39.780 26.027 1.00 55.73 O
ATOM 9 C3' C A 19 -11.678 -37.733 26.784 1.00 57.36 C
ATOM 10 O3' C A 19 -12.388 -36.625 26.263 1.00 51.38 O
ATOM 11 C2' C A 19 -12.630 -38.902 27.113 1.00 59.38 C
ATOM 12 O2' C A 19 -13.820 -38.893 26.336 1.00 63.41 O
ATOM 13 C1' C A 19 -11.833 -40.186 26.848 1.00 54.22 C
ATOM 14 N1 C A 19 -11.384 -40.670 28.195 1.00 54.19 N
ATOM 15 C2 C A 19 -12.382 -40.956 29.176 1.00 51.49 C
ATOM 16 O2 C A 19 -13.585 -40.850 28.843 1.00 49.20 O
ATOM 17 N3 C A 19 -11.989 -41.342 30.437 1.00 50.06 N
ATOM 18 C4 C A 19 -10.678 -41.436 30.716 1.00 45.40 C
ATOM 19 N4 C A 19 -10.322 -41.798 31.934 1.00 48.45 N
ATOM 20 C5 C A 19 -9.659 -41.136 29.757 1.00 48.54 C
ATOM 21 C6 C A 19 -10.043 -40.754 28.520 1.00 51.63 C
ATOM 22 P A A 20 -12.463 -35.198 27.043 1.00 63.12 P
ATOM 23 OP1 A A 20 -12.867 -34.165 26.043 1.00 55.08 O
ATOM 24 OP2 A A 20 -11.193 -35.050 27.813 1.00 55.12 O
ATOM 25 O5' A A 20 -13.680 -35.380 28.084 1.00 61.21 O
TER
ATOM 1 O3' G B 16 -2.771 -40.331 35.936 1.00 58.71 O
ATOM 2 P U B 17 -3.783 -41.592 35.997 1.00 66.96 P
ATOM 3 OP1 U B 17 -5.013 -41.044 36.623 1.00 58.84 O
ATOM 4 OP2 U B 17 -3.083 -42.783 36.591 1.00 62.37 O
ATOM 5 O5' U B 17 -4.163 -41.996 34.495 1.00 59.77 O
ATOM 6 C5' U B 17 -3.276 -42.779 33.709 1.00 52.94 C
ATOM 7 C4' U B 17 -4.050 -43.415 32.556 1.00 60.46 C
ATOM 8 O4' U B 17 -4.948 -44.465 33.039 1.00 57.69 O
ATOM 9 C3' U B 17 -4.942 -42.484 31.744 1.00 57.30 C
ATOM 10 O3' U B 17 -5.033 -42.974 30.413 1.00 58.27 O
ATOM 11 C2' U B 17 -6.283 -42.652 32.447 1.00 55.45 C
ATOM 12 O2' U B 17 -7.384 -42.204 31.656 1.00 55.12 O
ATOM 13 C1' U B 17 -6.276 -44.160 32.693 1.00 56.37 C
ATOM 14 N1 U B 17 -7.115 -44.410 33.877 1.00 61.28 N
ATOM 15 C2 U B 17 -8.436 -44.803 33.699 1.00 53.70 C
ATOM 16 O2 U B 17 -8.931 -45.000 32.588 1.00 50.22 O
ATOM 17 N3 U B 17 -9.116 -44.954 34.890 1.00 50.64 N
ATOM 18 C4 U B 17 -8.613 -44.761 36.180 1.00 59.41 C
ATOM 19 O4 U B 17 -9.339 -44.938 37.170 1.00 62.07 O
ATOM 20 C5 U B 17 -7.236 -44.317 36.262 1.00 57.44 C
ATOM 21 C6 U B 17 -6.555 -44.174 35.126 1.00 59.96 C
ATOM 22 P U B 18 -4.124 -42.271 29.287 1.00 65.37 P
ATOM 23 OP1 U B 18 -4.187 -43.154 28.096 1.00 62.43 O
ATOM 24 OP2 U B 18 -2.823 -42.007 29.965 1.00 57.92 O
ATOM 25 O5' U B 18 -4.925 -40.948 28.801 1.00 57.19 O
TER
Atoms:
C2: (-12.382,-40.956,29.176)
OP1: (-6.427,-39.840,24.071)
OP2: (-7.278,-37.599,23.206)
C4: (-10.678,-41.436,30.716)
O5': (-8.601,-38.837,24.879)
C3': (-11.678,-37.733,26.784)
C1': (-11.833,-40.186,26.848)
O4': (-10.737,-39.780,26.027)
C5': (-9.425,-37.782,25.471)
P: (-7.122,-38.521,24.316)
O2: (-13.585,-40.850,28.843)
C4': (-10.825,-38.367,25.682)
C2': (-12.630,-38.902,27.113)
O2': (-13.820,-38.893,26.336)
N1: (-11.384,-40.670,28.195)
N3: (-11.989,-41.342,30.437)
N4: (-10.322,-41.798,31.934)
C6: (-10.043,-40.754,28.520)
C5: (-9.659,-41.136,29.757)
O3': (-12.388,-36.625,26.263)
OP1: (-6.427,-39.840,24.071)
OP2: (-7.278,-37.599,23.206)
C4: (-10.678,-41.436,30.716)
O5': (-8.601,-38.837,24.879)
C3': (-11.678,-37.733,26.784)
C1': (-11.833,-40.186,26.848)
O4': (-10.737,-39.780,26.027)
C5': (-9.425,-37.782,25.471)
P: (-7.122,-38.521,24.316)
O2: (-13.585,-40.850,28.843)
C4': (-10.825,-38.367,25.682)
C2': (-12.630,-38.902,27.113)
O2': (-13.820,-38.893,26.336)
N1: (-11.384,-40.670,28.195)
N3: (-11.989,-41.342,30.437)
N4: (-10.322,-41.798,31.934)
C6: (-10.043,-40.754,28.520)
C5: (-9.659,-41.136,29.757)
O3': (-12.388,-36.625,26.263)
C4: (-8.613,-44.761,36.180)
N3: (-9.116,-44.954,34.890)
OP1: (-5.013,-41.044,36.623)
OP2: (-3.083,-42.783,36.591)
C2: (-8.436,-44.803,33.699)
C1': (-6.276,-44.160,32.693)
C3': (-4.942,-42.484,31.744)
O5': (-4.163,-41.996,34.495)
O4': (-4.948,-44.465,33.039)
C5': (-3.276,-42.779,33.709)
P: (-3.783,-41.592,35.997)
C4': (-4.050,-43.415,32.556)
C2': (-6.283,-42.652,32.447)
O2': (-7.384,-42.204,31.656)
N1: (-7.115,-44.410,33.877)
O4: (-9.339,-44.938,37.170)
O2: (-8.931,-45.000,32.588)
C6: (-6.555,-44.174,35.126)
C5: (-7.236,-44.317,36.262)
O3': (-5.033,-42.974,30.413)
N3: (-9.116,-44.954,34.890)
OP1: (-5.013,-41.044,36.623)
OP2: (-3.083,-42.783,36.591)
C2: (-8.436,-44.803,33.699)
C1': (-6.276,-44.160,32.693)
C3': (-4.942,-42.484,31.744)
O5': (-4.163,-41.996,34.495)
O4': (-4.948,-44.465,33.039)
C5': (-3.276,-42.779,33.709)
P: (-3.783,-41.592,35.997)
C4': (-4.050,-43.415,32.556)
C2': (-6.283,-42.652,32.447)
O2': (-7.384,-42.204,31.656)
N1: (-7.115,-44.410,33.877)
O4: (-9.339,-44.938,37.170)
O2: (-8.931,-45.000,32.588)
C6: (-6.555,-44.174,35.126)
C5: (-7.236,-44.317,36.262)
O3': (-5.033,-42.974,30.413)
Image (generated by PyMOL):