Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:B19:B17
Extra
PDB:
ATOM 1 O3' U A 18 -7.417 -17.537 0.305 1.00 65.11 O
ATOM 2 P C A 19 -7.846 -17.055 1.793 1.00 64.37 P
ATOM 3 OP1 C A 19 -6.810 -16.046 2.191 1.00 58.14 O
ATOM 4 OP2 C A 19 -8.140 -18.212 2.675 1.00 61.00 O
ATOM 5 O5' C A 19 -9.261 -16.331 1.494 1.00 67.03 O
ATOM 6 C5' C A 19 -10.318 -17.038 0.785 1.00 68.13 C
ATOM 7 C4' C A 19 -11.621 -16.233 0.811 1.00 70.12 C
ATOM 8 O4' C A 19 -11.453 -14.869 0.308 1.00 62.73 O
ATOM 9 C3' C A 19 -12.744 -16.830 -0.036 1.00 71.78 C
ATOM 10 O3' C A 19 -13.419 -17.908 0.681 1.00 76.13 O
ATOM 11 C2' C A 19 -13.599 -15.583 -0.368 1.00 70.99 C
ATOM 12 O2' C A 19 -14.580 -15.272 0.596 1.00 72.43 O
ATOM 13 C1' C A 19 -12.607 -14.428 -0.380 1.00 61.16 C
ATOM 14 N1 C A 19 -12.146 -14.018 -1.712 1.00 64.85 N
ATOM 15 C2 C A 19 -13.015 -13.556 -2.735 1.00 70.22 C
ATOM 16 O2 C A 19 -14.233 -13.490 -2.540 1.00 72.14 O
ATOM 17 N3 C A 19 -12.503 -13.203 -3.941 1.00 67.45 N
ATOM 18 C4 C A 19 -11.185 -13.295 -4.134 1.00 64.45 C
ATOM 19 N4 C A 19 -10.674 -12.947 -5.318 1.00 70.83 N
ATOM 20 C5 C A 19 -10.295 -13.746 -3.106 1.00 63.29 C
ATOM 21 C6 C A 19 -10.804 -14.091 -1.920 1.00 64.41 C
ATOM 22 P A A 20 -13.741 -19.269 -0.111 1.00 75.88 P
ATOM 23 OP1 A A 20 -14.277 -20.331 0.789 1.00 72.94 O
ATOM 24 OP2 A A 20 -12.517 -19.525 -0.907 1.00 76.22 O
ATOM 25 O5' A A 20 -14.928 -18.800 -1.063 1.00 71.51 O
TER
ATOM 1 O3' G B 16 -4.680 -15.161 -10.349 1.00 70.54 O
ATOM 2 P U B 17 -5.522 -13.813 -10.045 1.00 74.49 P
ATOM 3 OP1 U B 17 -6.973 -14.053 -10.269 1.00 67.70 O
ATOM 4 OP2 U B 17 -4.849 -12.699 -10.787 1.00 69.35 O
ATOM 5 O5' U B 17 -5.285 -13.664 -8.456 1.00 70.28 O
ATOM 6 C5' U B 17 -4.157 -13.050 -7.795 1.00 70.85 C
ATOM 7 C4' U B 17 -4.682 -12.243 -6.606 1.00 70.56 C
ATOM 8 O4' U B 17 -5.454 -11.108 -7.109 1.00 74.46 O
ATOM 9 C3' U B 17 -5.629 -13.009 -5.670 1.00 71.67 C
ATOM 10 O3' U B 17 -5.483 -12.650 -4.296 1.00 68.63 O
ATOM 11 C2' U B 17 -7.005 -12.640 -6.232 1.00 68.96 C
ATOM 12 O2' U B 17 -8.077 -12.662 -5.309 1.00 64.09 O
ATOM 13 C1' U B 17 -6.799 -11.206 -6.665 1.00 73.59 C
ATOM 14 N1 U B 17 -7.854 -10.891 -7.696 1.00 74.65 N
ATOM 15 C2 U B 17 -9.045 -10.331 -7.264 1.00 74.40 C
ATOM 16 O2 U B 17 -9.270 -10.043 -6.097 1.00 73.48 O
ATOM 17 N3 U B 17 -9.965 -10.105 -8.254 1.00 77.82 N
ATOM 18 C4 U B 17 -9.828 -10.378 -9.599 1.00 77.80 C
ATOM 19 O4 U B 17 -10.743 -10.114 -10.370 1.00 76.93 O
ATOM 20 C5 U B 17 -8.574 -10.979 -9.969 1.00 77.43 C
ATOM 21 C6 U B 17 -7.661 -11.213 -9.021 1.00 75.30 C
ATOM 22 P U B 18 -4.614 -13.524 -3.268 1.00 69.74 P
ATOM 23 OP1 U B 18 -4.182 -12.625 -2.150 1.00 73.47 O
ATOM 24 OP2 U B 18 -3.541 -14.205 -4.023 1.00 72.66 O
ATOM 25 O5' U B 18 -5.721 -14.540 -2.683 1.00 64.36 O
TER
ATOM 2 P C A 19 -7.846 -17.055 1.793 1.00 64.37 P
ATOM 3 OP1 C A 19 -6.810 -16.046 2.191 1.00 58.14 O
ATOM 4 OP2 C A 19 -8.140 -18.212 2.675 1.00 61.00 O
ATOM 5 O5' C A 19 -9.261 -16.331 1.494 1.00 67.03 O
ATOM 6 C5' C A 19 -10.318 -17.038 0.785 1.00 68.13 C
ATOM 7 C4' C A 19 -11.621 -16.233 0.811 1.00 70.12 C
ATOM 8 O4' C A 19 -11.453 -14.869 0.308 1.00 62.73 O
ATOM 9 C3' C A 19 -12.744 -16.830 -0.036 1.00 71.78 C
ATOM 10 O3' C A 19 -13.419 -17.908 0.681 1.00 76.13 O
ATOM 11 C2' C A 19 -13.599 -15.583 -0.368 1.00 70.99 C
ATOM 12 O2' C A 19 -14.580 -15.272 0.596 1.00 72.43 O
ATOM 13 C1' C A 19 -12.607 -14.428 -0.380 1.00 61.16 C
ATOM 14 N1 C A 19 -12.146 -14.018 -1.712 1.00 64.85 N
ATOM 15 C2 C A 19 -13.015 -13.556 -2.735 1.00 70.22 C
ATOM 16 O2 C A 19 -14.233 -13.490 -2.540 1.00 72.14 O
ATOM 17 N3 C A 19 -12.503 -13.203 -3.941 1.00 67.45 N
ATOM 18 C4 C A 19 -11.185 -13.295 -4.134 1.00 64.45 C
ATOM 19 N4 C A 19 -10.674 -12.947 -5.318 1.00 70.83 N
ATOM 20 C5 C A 19 -10.295 -13.746 -3.106 1.00 63.29 C
ATOM 21 C6 C A 19 -10.804 -14.091 -1.920 1.00 64.41 C
ATOM 22 P A A 20 -13.741 -19.269 -0.111 1.00 75.88 P
ATOM 23 OP1 A A 20 -14.277 -20.331 0.789 1.00 72.94 O
ATOM 24 OP2 A A 20 -12.517 -19.525 -0.907 1.00 76.22 O
ATOM 25 O5' A A 20 -14.928 -18.800 -1.063 1.00 71.51 O
TER
ATOM 1 O3' G B 16 -4.680 -15.161 -10.349 1.00 70.54 O
ATOM 2 P U B 17 -5.522 -13.813 -10.045 1.00 74.49 P
ATOM 3 OP1 U B 17 -6.973 -14.053 -10.269 1.00 67.70 O
ATOM 4 OP2 U B 17 -4.849 -12.699 -10.787 1.00 69.35 O
ATOM 5 O5' U B 17 -5.285 -13.664 -8.456 1.00 70.28 O
ATOM 6 C5' U B 17 -4.157 -13.050 -7.795 1.00 70.85 C
ATOM 7 C4' U B 17 -4.682 -12.243 -6.606 1.00 70.56 C
ATOM 8 O4' U B 17 -5.454 -11.108 -7.109 1.00 74.46 O
ATOM 9 C3' U B 17 -5.629 -13.009 -5.670 1.00 71.67 C
ATOM 10 O3' U B 17 -5.483 -12.650 -4.296 1.00 68.63 O
ATOM 11 C2' U B 17 -7.005 -12.640 -6.232 1.00 68.96 C
ATOM 12 O2' U B 17 -8.077 -12.662 -5.309 1.00 64.09 O
ATOM 13 C1' U B 17 -6.799 -11.206 -6.665 1.00 73.59 C
ATOM 14 N1 U B 17 -7.854 -10.891 -7.696 1.00 74.65 N
ATOM 15 C2 U B 17 -9.045 -10.331 -7.264 1.00 74.40 C
ATOM 16 O2 U B 17 -9.270 -10.043 -6.097 1.00 73.48 O
ATOM 17 N3 U B 17 -9.965 -10.105 -8.254 1.00 77.82 N
ATOM 18 C4 U B 17 -9.828 -10.378 -9.599 1.00 77.80 C
ATOM 19 O4 U B 17 -10.743 -10.114 -10.370 1.00 76.93 O
ATOM 20 C5 U B 17 -8.574 -10.979 -9.969 1.00 77.43 C
ATOM 21 C6 U B 17 -7.661 -11.213 -9.021 1.00 75.30 C
ATOM 22 P U B 18 -4.614 -13.524 -3.268 1.00 69.74 P
ATOM 23 OP1 U B 18 -4.182 -12.625 -2.150 1.00 73.47 O
ATOM 24 OP2 U B 18 -3.541 -14.205 -4.023 1.00 72.66 O
ATOM 25 O5' U B 18 -5.721 -14.540 -2.683 1.00 64.36 O
TER
Atoms:
C2: (-13.015,-13.556,-2.735)
OP1: (-6.810,-16.046,2.191)
OP2: (-8.140,-18.212,2.675)
C4: (-11.185,-13.295,-4.134)
O5': (-9.261,-16.331,1.494)
C3': (-12.744,-16.830,-0.036)
C1': (-12.607,-14.428,-0.380)
O4': (-11.453,-14.869,0.308)
C5': (-10.318,-17.038,0.785)
P: (-7.846,-17.055,1.793)
O2: (-14.233,-13.490,-2.540)
C4': (-11.621,-16.233,0.811)
C2': (-13.599,-15.583,-0.368)
O2': (-14.580,-15.272,0.596)
N1: (-12.146,-14.018,-1.712)
N3: (-12.503,-13.203,-3.941)
N4: (-10.674,-12.947,-5.318)
C6: (-10.804,-14.091,-1.920)
C5: (-10.295,-13.746,-3.106)
O3': (-13.419,-17.908,0.681)
OP1: (-6.810,-16.046,2.191)
OP2: (-8.140,-18.212,2.675)
C4: (-11.185,-13.295,-4.134)
O5': (-9.261,-16.331,1.494)
C3': (-12.744,-16.830,-0.036)
C1': (-12.607,-14.428,-0.380)
O4': (-11.453,-14.869,0.308)
C5': (-10.318,-17.038,0.785)
P: (-7.846,-17.055,1.793)
O2: (-14.233,-13.490,-2.540)
C4': (-11.621,-16.233,0.811)
C2': (-13.599,-15.583,-0.368)
O2': (-14.580,-15.272,0.596)
N1: (-12.146,-14.018,-1.712)
N3: (-12.503,-13.203,-3.941)
N4: (-10.674,-12.947,-5.318)
C6: (-10.804,-14.091,-1.920)
C5: (-10.295,-13.746,-3.106)
O3': (-13.419,-17.908,0.681)
C4: (-9.828,-10.378,-9.599)
N3: (-9.965,-10.105,-8.254)
OP1: (-6.973,-14.053,-10.269)
OP2: (-4.849,-12.699,-10.787)
C2: (-9.045,-10.331,-7.264)
C1': (-6.799,-11.206,-6.665)
C3': (-5.629,-13.009,-5.670)
O5': (-5.285,-13.664,-8.456)
O4': (-5.454,-11.108,-7.109)
C5': (-4.157,-13.050,-7.795)
P: (-5.522,-13.813,-10.045)
C4': (-4.682,-12.243,-6.606)
C2': (-7.005,-12.640,-6.232)
O2': (-8.077,-12.662,-5.309)
N1: (-7.854,-10.891,-7.696)
O4: (-10.743,-10.114,-10.370)
O2: (-9.270,-10.043,-6.097)
C6: (-7.661,-11.213,-9.021)
C5: (-8.574,-10.979,-9.969)
O3': (-5.483,-12.650,-4.296)
N3: (-9.965,-10.105,-8.254)
OP1: (-6.973,-14.053,-10.269)
OP2: (-4.849,-12.699,-10.787)
C2: (-9.045,-10.331,-7.264)
C1': (-6.799,-11.206,-6.665)
C3': (-5.629,-13.009,-5.670)
O5': (-5.285,-13.664,-8.456)
O4': (-5.454,-11.108,-7.109)
C5': (-4.157,-13.050,-7.795)
P: (-5.522,-13.813,-10.045)
C4': (-4.682,-12.243,-6.606)
C2': (-7.005,-12.640,-6.232)
O2': (-8.077,-12.662,-5.309)
N1: (-7.854,-10.891,-7.696)
O4: (-10.743,-10.114,-10.370)
O2: (-9.270,-10.043,-6.097)
C6: (-7.661,-11.213,-9.021)
C5: (-8.574,-10.979,-9.969)
O3': (-5.483,-12.650,-4.296)
Image (generated by PyMOL):