Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:A19:A17
Extra
PDB:
ATOM 1 O3' U A 18 -6.023 -17.717 2.209 1.00 37.34 O
ATOM 2 P C A 19 -6.692 -17.196 3.588 1.00 38.64 P
ATOM 3 OP1 C A 19 -5.946 -15.994 4.071 1.00 38.43 O
ATOM 4 OP2 C A 19 -6.838 -18.378 4.487 1.00 38.26 O
ATOM 5 O5' C A 19 -8.169 -16.761 3.164 1.00 36.39 O
ATOM 6 C5' C A 19 -9.006 -17.643 2.388 1.00 35.01 C
ATOM 7 C4' C A 19 -10.429 -17.135 2.363 1.00 33.65 C
ATOM 8 O4' C A 19 -10.444 -15.760 1.906 1.00 32.39 O
ATOM 9 C3' C A 19 -11.371 -17.879 1.426 1.00 33.82 C
ATOM 10 O3' C A 19 -11.930 -19.027 2.079 1.00 33.61 O
ATOM 11 C2' C A 19 -12.423 -16.821 1.081 1.00 33.32 C
ATOM 12 O2' C A 19 -13.508 -16.753 1.987 1.00 33.51 O
ATOM 13 C1' C A 19 -11.613 -15.518 1.146 1.00 31.85 C
ATOM 14 N1 C A 19 -11.211 -14.980 -0.167 1.00 31.01 N
ATOM 15 C2 C A 19 -12.202 -14.660 -1.106 1.00 30.55 C
ATOM 16 O2 C A 19 -13.401 -14.783 -0.793 1.00 31.19 O
ATOM 17 N3 C A 19 -11.827 -14.220 -2.326 1.00 29.42 N
ATOM 18 C4 C A 19 -10.535 -14.078 -2.618 1.00 29.03 C
ATOM 19 N4 C A 19 -10.213 -13.659 -3.839 1.00 30.27 N
ATOM 20 C5 C A 19 -9.514 -14.361 -1.675 1.00 28.77 C
ATOM 21 C6 C A 19 -9.891 -14.806 -0.476 1.00 30.33 C
ATOM 22 P A A 20 -12.294 -20.347 1.225 1.00 35.05 P
ATOM 23 OP1 A A 20 -12.965 -21.333 2.124 1.00 33.01 O
ATOM 24 OP2 A A 20 -11.084 -20.761 0.464 1.00 34.67 O
ATOM 25 O5' A A 20 -13.377 -19.817 0.184 1.00 34.51 O
TER
ATOM 1 O3' G B 16 -2.840 -14.973 -8.241 1.00 38.91 O
ATOM 2 P U B 17 -3.794 -13.749 -7.813 1.00 40.52 P
ATOM 3 OP1 U B 17 -5.153 -14.065 -8.305 1.00 41.03 O
ATOM 4 OP2 U B 17 -3.130 -12.492 -8.247 1.00 41.60 O
ATOM 5 O5' U B 17 -3.831 -13.771 -6.218 1.00 40.29 O
ATOM 6 C5' U B 17 -3.003 -12.883 -5.435 1.00 40.10 C
ATOM 7 C4' U B 17 -3.833 -12.189 -4.373 1.00 39.68 C
ATOM 8 O4' U B 17 -4.674 -11.179 -4.988 1.00 40.10 O
ATOM 9 C3' U B 17 -4.758 -13.082 -3.554 1.00 38.88 C
ATOM 10 O3' U B 17 -4.807 -12.573 -2.234 1.00 38.34 O
ATOM 11 C2' U B 17 -6.116 -12.864 -4.213 1.00 38.81 C
ATOM 12 O2' U B 17 -7.205 -13.049 -3.331 1.00 38.53 O
ATOM 13 C1' U B 17 -6.019 -11.403 -4.636 1.00 39.01 C
ATOM 14 N1 U B 17 -6.861 -11.065 -5.790 1.00 39.16 N
ATOM 15 C2 U B 17 -8.193 -10.774 -5.556 1.00 39.76 C
ATOM 16 O2 U B 17 -8.699 -10.789 -4.442 1.00 39.72 O
ATOM 17 N3 U B 17 -8.915 -10.464 -6.678 1.00 39.99 N
ATOM 18 C4 U B 17 -8.458 -10.415 -7.975 1.00 40.72 C
ATOM 19 O4 U B 17 -9.234 -10.101 -8.879 1.00 42.42 O
ATOM 20 C5 U B 17 -7.077 -10.729 -8.131 1.00 40.20 C
ATOM 21 C6 U B 17 -6.345 -11.035 -7.062 1.00 39.97 C
ATOM 22 P U B 18 -3.906 -13.238 -1.090 1.00 39.03 P
ATOM 23 OP1 U B 18 -3.704 -12.202 -0.042 1.00 38.83 O
ATOM 24 OP2 U B 18 -2.728 -13.833 -1.767 1.00 38.64 O
ATOM 25 O5' U B 18 -4.811 -14.409 -0.486 1.00 38.16 O
TER
ATOM 2 P C A 19 -6.692 -17.196 3.588 1.00 38.64 P
ATOM 3 OP1 C A 19 -5.946 -15.994 4.071 1.00 38.43 O
ATOM 4 OP2 C A 19 -6.838 -18.378 4.487 1.00 38.26 O
ATOM 5 O5' C A 19 -8.169 -16.761 3.164 1.00 36.39 O
ATOM 6 C5' C A 19 -9.006 -17.643 2.388 1.00 35.01 C
ATOM 7 C4' C A 19 -10.429 -17.135 2.363 1.00 33.65 C
ATOM 8 O4' C A 19 -10.444 -15.760 1.906 1.00 32.39 O
ATOM 9 C3' C A 19 -11.371 -17.879 1.426 1.00 33.82 C
ATOM 10 O3' C A 19 -11.930 -19.027 2.079 1.00 33.61 O
ATOM 11 C2' C A 19 -12.423 -16.821 1.081 1.00 33.32 C
ATOM 12 O2' C A 19 -13.508 -16.753 1.987 1.00 33.51 O
ATOM 13 C1' C A 19 -11.613 -15.518 1.146 1.00 31.85 C
ATOM 14 N1 C A 19 -11.211 -14.980 -0.167 1.00 31.01 N
ATOM 15 C2 C A 19 -12.202 -14.660 -1.106 1.00 30.55 C
ATOM 16 O2 C A 19 -13.401 -14.783 -0.793 1.00 31.19 O
ATOM 17 N3 C A 19 -11.827 -14.220 -2.326 1.00 29.42 N
ATOM 18 C4 C A 19 -10.535 -14.078 -2.618 1.00 29.03 C
ATOM 19 N4 C A 19 -10.213 -13.659 -3.839 1.00 30.27 N
ATOM 20 C5 C A 19 -9.514 -14.361 -1.675 1.00 28.77 C
ATOM 21 C6 C A 19 -9.891 -14.806 -0.476 1.00 30.33 C
ATOM 22 P A A 20 -12.294 -20.347 1.225 1.00 35.05 P
ATOM 23 OP1 A A 20 -12.965 -21.333 2.124 1.00 33.01 O
ATOM 24 OP2 A A 20 -11.084 -20.761 0.464 1.00 34.67 O
ATOM 25 O5' A A 20 -13.377 -19.817 0.184 1.00 34.51 O
TER
ATOM 1 O3' G B 16 -2.840 -14.973 -8.241 1.00 38.91 O
ATOM 2 P U B 17 -3.794 -13.749 -7.813 1.00 40.52 P
ATOM 3 OP1 U B 17 -5.153 -14.065 -8.305 1.00 41.03 O
ATOM 4 OP2 U B 17 -3.130 -12.492 -8.247 1.00 41.60 O
ATOM 5 O5' U B 17 -3.831 -13.771 -6.218 1.00 40.29 O
ATOM 6 C5' U B 17 -3.003 -12.883 -5.435 1.00 40.10 C
ATOM 7 C4' U B 17 -3.833 -12.189 -4.373 1.00 39.68 C
ATOM 8 O4' U B 17 -4.674 -11.179 -4.988 1.00 40.10 O
ATOM 9 C3' U B 17 -4.758 -13.082 -3.554 1.00 38.88 C
ATOM 10 O3' U B 17 -4.807 -12.573 -2.234 1.00 38.34 O
ATOM 11 C2' U B 17 -6.116 -12.864 -4.213 1.00 38.81 C
ATOM 12 O2' U B 17 -7.205 -13.049 -3.331 1.00 38.53 O
ATOM 13 C1' U B 17 -6.019 -11.403 -4.636 1.00 39.01 C
ATOM 14 N1 U B 17 -6.861 -11.065 -5.790 1.00 39.16 N
ATOM 15 C2 U B 17 -8.193 -10.774 -5.556 1.00 39.76 C
ATOM 16 O2 U B 17 -8.699 -10.789 -4.442 1.00 39.72 O
ATOM 17 N3 U B 17 -8.915 -10.464 -6.678 1.00 39.99 N
ATOM 18 C4 U B 17 -8.458 -10.415 -7.975 1.00 40.72 C
ATOM 19 O4 U B 17 -9.234 -10.101 -8.879 1.00 42.42 O
ATOM 20 C5 U B 17 -7.077 -10.729 -8.131 1.00 40.20 C
ATOM 21 C6 U B 17 -6.345 -11.035 -7.062 1.00 39.97 C
ATOM 22 P U B 18 -3.906 -13.238 -1.090 1.00 39.03 P
ATOM 23 OP1 U B 18 -3.704 -12.202 -0.042 1.00 38.83 O
ATOM 24 OP2 U B 18 -2.728 -13.833 -1.767 1.00 38.64 O
ATOM 25 O5' U B 18 -4.811 -14.409 -0.486 1.00 38.16 O
TER
Atoms:
C2: (-12.202,-14.660,-1.106)
OP1: (-5.946,-15.994,4.071)
OP2: (-6.838,-18.378,4.487)
C4: (-10.535,-14.078,-2.618)
O5': (-8.169,-16.761,3.164)
C3': (-11.371,-17.879,1.426)
C1': (-11.613,-15.518,1.146)
O4': (-10.444,-15.760,1.906)
C5': (-9.006,-17.643,2.388)
P: (-6.692,-17.196,3.588)
O2: (-13.401,-14.783,-0.793)
C4': (-10.429,-17.135,2.363)
C2': (-12.423,-16.821,1.081)
O2': (-13.508,-16.753,1.987)
N1: (-11.211,-14.980,-0.167)
N3: (-11.827,-14.220,-2.326)
N4: (-10.213,-13.659,-3.839)
C6: (-9.891,-14.806,-0.476)
C5: (-9.514,-14.361,-1.675)
O3': (-11.930,-19.027,2.079)
OP1: (-5.946,-15.994,4.071)
OP2: (-6.838,-18.378,4.487)
C4: (-10.535,-14.078,-2.618)
O5': (-8.169,-16.761,3.164)
C3': (-11.371,-17.879,1.426)
C1': (-11.613,-15.518,1.146)
O4': (-10.444,-15.760,1.906)
C5': (-9.006,-17.643,2.388)
P: (-6.692,-17.196,3.588)
O2: (-13.401,-14.783,-0.793)
C4': (-10.429,-17.135,2.363)
C2': (-12.423,-16.821,1.081)
O2': (-13.508,-16.753,1.987)
N1: (-11.211,-14.980,-0.167)
N3: (-11.827,-14.220,-2.326)
N4: (-10.213,-13.659,-3.839)
C6: (-9.891,-14.806,-0.476)
C5: (-9.514,-14.361,-1.675)
O3': (-11.930,-19.027,2.079)
C4: (-8.458,-10.415,-7.975)
N3: (-8.915,-10.464,-6.678)
OP1: (-5.153,-14.065,-8.305)
OP2: (-3.130,-12.492,-8.247)
C2: (-8.193,-10.774,-5.556)
C1': (-6.019,-11.403,-4.636)
C3': (-4.758,-13.082,-3.554)
O5': (-3.831,-13.771,-6.218)
O4': (-4.674,-11.179,-4.988)
C5': (-3.003,-12.883,-5.435)
P: (-3.794,-13.749,-7.813)
C4': (-3.833,-12.189,-4.373)
C2': (-6.116,-12.864,-4.213)
O2': (-7.205,-13.049,-3.331)
N1: (-6.861,-11.065,-5.790)
O4: (-9.234,-10.101,-8.879)
O2: (-8.699,-10.789,-4.442)
C6: (-6.345,-11.035,-7.062)
C5: (-7.077,-10.729,-8.131)
O3': (-4.807,-12.573,-2.234)
N3: (-8.915,-10.464,-6.678)
OP1: (-5.153,-14.065,-8.305)
OP2: (-3.130,-12.492,-8.247)
C2: (-8.193,-10.774,-5.556)
C1': (-6.019,-11.403,-4.636)
C3': (-4.758,-13.082,-3.554)
O5': (-3.831,-13.771,-6.218)
O4': (-4.674,-11.179,-4.988)
C5': (-3.003,-12.883,-5.435)
P: (-3.794,-13.749,-7.813)
C4': (-3.833,-12.189,-4.373)
C2': (-6.116,-12.864,-4.213)
O2': (-7.205,-13.049,-3.331)
N1: (-6.861,-11.065,-5.790)
O4: (-9.234,-10.101,-8.879)
O2: (-8.699,-10.789,-4.442)
C6: (-6.345,-11.035,-7.062)
C5: (-7.077,-10.729,-8.131)
O3': (-4.807,-12.573,-2.234)
Image (generated by PyMOL):