Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:B19:B17
Extra
PDB:
ATOM 1 O3' U A 18 -6.907 -37.949 27.280 1.00 39.27 O
ATOM 2 P C A 19 -7.329 -38.538 25.839 1.00 38.41 P
ATOM 3 OP1 C A 19 -6.387 -39.628 25.472 1.00 39.05 O
ATOM 4 OP2 C A 19 -7.515 -37.395 24.917 1.00 37.83 O
ATOM 5 O5' C A 19 -8.774 -39.158 26.108 1.00 37.98 O
ATOM 6 C5' C A 19 -9.778 -38.415 26.836 1.00 37.32 C
ATOM 7 C4' C A 19 -11.127 -39.090 26.714 1.00 36.96 C
ATOM 8 O4' C A 19 -11.008 -40.478 27.119 1.00 36.05 O
ATOM 9 C3' C A 19 -12.226 -38.516 27.596 1.00 37.06 C
ATOM 10 O3' C A 19 -12.872 -37.405 26.969 1.00 37.14 O
ATOM 11 C2' C A 19 -13.158 -39.710 27.810 1.00 36.35 C
ATOM 12 O2' C A 19 -14.099 -39.898 26.772 1.00 36.48 O
ATOM 13 C1' C A 19 -12.179 -40.886 27.808 1.00 35.21 C
ATOM 14 N1 C A 19 -11.785 -41.364 29.148 1.00 34.68 N
ATOM 15 C2 C A 19 -12.771 -41.841 30.027 1.00 34.34 C
ATOM 16 O2 C A 19 -13.963 -41.835 29.667 1.00 35.44 O
ATOM 17 N3 C A 19 -12.397 -42.289 31.246 1.00 32.44 N
ATOM 18 C4 C A 19 -11.112 -42.270 31.608 1.00 32.88 C
ATOM 19 N4 C A 19 -10.790 -42.719 32.827 1.00 33.38 N
ATOM 20 C5 C A 19 -10.099 -41.791 30.743 1.00 32.94 C
ATOM 21 C6 C A 19 -10.474 -41.353 29.535 1.00 34.29 C
ATOM 22 P A A 20 -13.479 -36.221 27.875 1.00 38.26 P
ATOM 23 OP1 A A 20 -14.146 -35.212 27.002 1.00 36.95 O
ATOM 24 OP2 A A 20 -12.395 -35.784 28.800 1.00 37.90 O
ATOM 25 O5' A A 20 -14.601 -36.952 28.733 1.00 37.49 O
TER
ATOM 1 O3' G B 16 -4.685 -40.375 38.326 1.00 38.15 O
ATOM 2 P U B 17 -5.268 -41.774 37.791 1.00 39.27 P
ATOM 3 OP1 U B 17 -6.668 -41.539 37.355 1.00 39.37 O
ATOM 4 OP2 U B 17 -4.988 -42.816 38.816 1.00 39.17 O
ATOM 5 O5' U B 17 -4.369 -42.100 36.513 1.00 39.45 O
ATOM 6 C5' U B 17 -4.689 -41.544 35.225 1.00 40.24 C
ATOM 7 C4' U B 17 -4.751 -42.635 34.176 1.00 40.62 C
ATOM 8 O4' U B 17 -5.276 -43.855 34.759 1.00 41.60 O
ATOM 9 C3' U B 17 -5.663 -42.285 33.010 1.00 40.37 C
ATOM 10 O3' U B 17 -5.126 -42.851 31.828 1.00 39.38 O
ATOM 11 C2' U B 17 -6.978 -42.958 33.393 1.00 40.90 C
ATOM 12 O2' U B 17 -7.809 -43.294 32.299 1.00 40.99 O
ATOM 13 C1' U B 17 -6.493 -44.207 34.130 1.00 42.10 C
ATOM 14 N1 U B 17 -7.437 -44.658 35.169 1.00 43.85 N
ATOM 15 C2 U B 17 -8.605 -45.298 34.764 1.00 44.92 C
ATOM 16 O2 U B 17 -8.868 -45.538 33.594 1.00 44.91 O
ATOM 17 N3 U B 17 -9.457 -45.639 35.783 1.00 45.95 N
ATOM 18 C4 U B 17 -9.276 -45.416 37.132 1.00 46.62 C
ATOM 19 O4 U B 17 -10.206 -45.639 37.910 1.00 47.60 O
ATOM 20 C5 U B 17 -8.038 -44.787 37.470 1.00 46.23 C
ATOM 21 C6 U B 17 -7.185 -44.440 36.505 1.00 44.88 C
ATOM 22 P U B 18 -4.441 -41.901 30.738 1.00 39.53 P
ATOM 23 OP1 U B 18 -3.840 -42.791 29.713 1.00 40.24 O
ATOM 24 OP2 U B 18 -3.578 -40.943 31.465 1.00 40.96 O
ATOM 25 O5' U B 18 -5.654 -41.060 30.131 1.00 38.86 O
TER
ATOM 2 P C A 19 -7.329 -38.538 25.839 1.00 38.41 P
ATOM 3 OP1 C A 19 -6.387 -39.628 25.472 1.00 39.05 O
ATOM 4 OP2 C A 19 -7.515 -37.395 24.917 1.00 37.83 O
ATOM 5 O5' C A 19 -8.774 -39.158 26.108 1.00 37.98 O
ATOM 6 C5' C A 19 -9.778 -38.415 26.836 1.00 37.32 C
ATOM 7 C4' C A 19 -11.127 -39.090 26.714 1.00 36.96 C
ATOM 8 O4' C A 19 -11.008 -40.478 27.119 1.00 36.05 O
ATOM 9 C3' C A 19 -12.226 -38.516 27.596 1.00 37.06 C
ATOM 10 O3' C A 19 -12.872 -37.405 26.969 1.00 37.14 O
ATOM 11 C2' C A 19 -13.158 -39.710 27.810 1.00 36.35 C
ATOM 12 O2' C A 19 -14.099 -39.898 26.772 1.00 36.48 O
ATOM 13 C1' C A 19 -12.179 -40.886 27.808 1.00 35.21 C
ATOM 14 N1 C A 19 -11.785 -41.364 29.148 1.00 34.68 N
ATOM 15 C2 C A 19 -12.771 -41.841 30.027 1.00 34.34 C
ATOM 16 O2 C A 19 -13.963 -41.835 29.667 1.00 35.44 O
ATOM 17 N3 C A 19 -12.397 -42.289 31.246 1.00 32.44 N
ATOM 18 C4 C A 19 -11.112 -42.270 31.608 1.00 32.88 C
ATOM 19 N4 C A 19 -10.790 -42.719 32.827 1.00 33.38 N
ATOM 20 C5 C A 19 -10.099 -41.791 30.743 1.00 32.94 C
ATOM 21 C6 C A 19 -10.474 -41.353 29.535 1.00 34.29 C
ATOM 22 P A A 20 -13.479 -36.221 27.875 1.00 38.26 P
ATOM 23 OP1 A A 20 -14.146 -35.212 27.002 1.00 36.95 O
ATOM 24 OP2 A A 20 -12.395 -35.784 28.800 1.00 37.90 O
ATOM 25 O5' A A 20 -14.601 -36.952 28.733 1.00 37.49 O
TER
ATOM 1 O3' G B 16 -4.685 -40.375 38.326 1.00 38.15 O
ATOM 2 P U B 17 -5.268 -41.774 37.791 1.00 39.27 P
ATOM 3 OP1 U B 17 -6.668 -41.539 37.355 1.00 39.37 O
ATOM 4 OP2 U B 17 -4.988 -42.816 38.816 1.00 39.17 O
ATOM 5 O5' U B 17 -4.369 -42.100 36.513 1.00 39.45 O
ATOM 6 C5' U B 17 -4.689 -41.544 35.225 1.00 40.24 C
ATOM 7 C4' U B 17 -4.751 -42.635 34.176 1.00 40.62 C
ATOM 8 O4' U B 17 -5.276 -43.855 34.759 1.00 41.60 O
ATOM 9 C3' U B 17 -5.663 -42.285 33.010 1.00 40.37 C
ATOM 10 O3' U B 17 -5.126 -42.851 31.828 1.00 39.38 O
ATOM 11 C2' U B 17 -6.978 -42.958 33.393 1.00 40.90 C
ATOM 12 O2' U B 17 -7.809 -43.294 32.299 1.00 40.99 O
ATOM 13 C1' U B 17 -6.493 -44.207 34.130 1.00 42.10 C
ATOM 14 N1 U B 17 -7.437 -44.658 35.169 1.00 43.85 N
ATOM 15 C2 U B 17 -8.605 -45.298 34.764 1.00 44.92 C
ATOM 16 O2 U B 17 -8.868 -45.538 33.594 1.00 44.91 O
ATOM 17 N3 U B 17 -9.457 -45.639 35.783 1.00 45.95 N
ATOM 18 C4 U B 17 -9.276 -45.416 37.132 1.00 46.62 C
ATOM 19 O4 U B 17 -10.206 -45.639 37.910 1.00 47.60 O
ATOM 20 C5 U B 17 -8.038 -44.787 37.470 1.00 46.23 C
ATOM 21 C6 U B 17 -7.185 -44.440 36.505 1.00 44.88 C
ATOM 22 P U B 18 -4.441 -41.901 30.738 1.00 39.53 P
ATOM 23 OP1 U B 18 -3.840 -42.791 29.713 1.00 40.24 O
ATOM 24 OP2 U B 18 -3.578 -40.943 31.465 1.00 40.96 O
ATOM 25 O5' U B 18 -5.654 -41.060 30.131 1.00 38.86 O
TER
Atoms:
C2: (-12.771,-41.841,30.027)
OP1: (-6.387,-39.628,25.472)
OP2: (-7.515,-37.395,24.917)
C4: (-11.112,-42.270,31.608)
O5': (-8.774,-39.158,26.108)
C3': (-12.226,-38.516,27.596)
C1': (-12.179,-40.886,27.808)
O4': (-11.008,-40.478,27.119)
C5': (-9.778,-38.415,26.836)
P: (-7.329,-38.538,25.839)
O2: (-13.963,-41.835,29.667)
C4': (-11.127,-39.090,26.714)
C2': (-13.158,-39.710,27.810)
O2': (-14.099,-39.898,26.772)
N1: (-11.785,-41.364,29.148)
N3: (-12.397,-42.289,31.246)
N4: (-10.790,-42.719,32.827)
C6: (-10.474,-41.353,29.535)
C5: (-10.099,-41.791,30.743)
O3': (-12.872,-37.405,26.969)
OP1: (-6.387,-39.628,25.472)
OP2: (-7.515,-37.395,24.917)
C4: (-11.112,-42.270,31.608)
O5': (-8.774,-39.158,26.108)
C3': (-12.226,-38.516,27.596)
C1': (-12.179,-40.886,27.808)
O4': (-11.008,-40.478,27.119)
C5': (-9.778,-38.415,26.836)
P: (-7.329,-38.538,25.839)
O2: (-13.963,-41.835,29.667)
C4': (-11.127,-39.090,26.714)
C2': (-13.158,-39.710,27.810)
O2': (-14.099,-39.898,26.772)
N1: (-11.785,-41.364,29.148)
N3: (-12.397,-42.289,31.246)
N4: (-10.790,-42.719,32.827)
C6: (-10.474,-41.353,29.535)
C5: (-10.099,-41.791,30.743)
O3': (-12.872,-37.405,26.969)
C4: (-9.276,-45.416,37.132)
N3: (-9.457,-45.639,35.783)
OP1: (-6.668,-41.539,37.355)
OP2: (-4.988,-42.816,38.816)
C2: (-8.605,-45.298,34.764)
C1': (-6.493,-44.207,34.130)
C3': (-5.663,-42.285,33.010)
O5': (-4.369,-42.100,36.513)
O4': (-5.276,-43.855,34.759)
C5': (-4.689,-41.544,35.225)
P: (-5.268,-41.774,37.791)
C4': (-4.751,-42.635,34.176)
C2': (-6.978,-42.958,33.393)
O2': (-7.809,-43.294,32.299)
N1: (-7.437,-44.658,35.169)
O4: (-10.206,-45.639,37.910)
O2: (-8.868,-45.538,33.594)
C6: (-7.185,-44.440,36.505)
C5: (-8.038,-44.787,37.470)
O3': (-5.126,-42.851,31.828)
N3: (-9.457,-45.639,35.783)
OP1: (-6.668,-41.539,37.355)
OP2: (-4.988,-42.816,38.816)
C2: (-8.605,-45.298,34.764)
C1': (-6.493,-44.207,34.130)
C3': (-5.663,-42.285,33.010)
O5': (-4.369,-42.100,36.513)
O4': (-5.276,-43.855,34.759)
C5': (-4.689,-41.544,35.225)
P: (-5.268,-41.774,37.791)
C4': (-4.751,-42.635,34.176)
C2': (-6.978,-42.958,33.393)
O2': (-7.809,-43.294,32.299)
N1: (-7.437,-44.658,35.169)
O4: (-10.206,-45.639,37.910)
O2: (-8.868,-45.538,33.594)
C6: (-7.185,-44.440,36.505)
C5: (-8.038,-44.787,37.470)
O3': (-5.126,-42.851,31.828)
Image (generated by PyMOL):