Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2588:A2591
Extra
PDB:
ATOM 1 O3' C A2587 -87.269 -27.008 11.588 1.00 0.01 O
ATOM 2 P G A2588 -87.199 -25.847 12.668 1.00 0.01 P
ATOM 3 OP1 G A2588 -88.591 -25.566 13.063 1.00 0.01 O
ATOM 4 OP2 G A2588 -86.378 -24.749 12.101 1.00 0.01 O
ATOM 5 O5' G A2588 -86.426 -26.540 13.862 1.00 0.01 O
ATOM 6 C5' G A2588 -86.967 -27.689 14.485 1.00 0.01 C
ATOM 7 C4' G A2588 -85.954 -28.402 15.325 1.00 0.01 C
ATOM 8 O4' G A2588 -84.901 -28.929 14.503 1.00 0.01 O
ATOM 9 C3' G A2588 -85.206 -27.564 16.320 1.00 0.01 C
ATOM 10 O3' G A2588 -85.973 -27.231 17.428 1.00 0.01 O
ATOM 11 C2' G A2588 -84.052 -28.463 16.654 1.00 0.01 C
ATOM 12 O2' G A2588 -84.483 -29.525 17.480 1.00 0.01 O
ATOM 13 C1' G A2588 -83.725 -29.028 15.282 1.00 0.01 C
ATOM 14 N9 G A2588 -82.641 -28.264 14.651 1.00 0.02 N
ATOM 15 C8 G A2588 -82.747 -27.166 13.859 1.00 0.02 C
ATOM 16 N7 G A2588 -81.581 -26.699 13.515 1.00 0.02 N
ATOM 17 C5 G A2588 -80.667 -27.532 14.139 1.00 0.02 C
ATOM 18 C6 G A2588 -79.269 -27.505 14.149 1.00 0.02 C
ATOM 19 O6 G A2588 -78.499 -26.742 13.596 1.00 0.02 O
ATOM 20 N1 G A2588 -78.736 -28.490 14.895 1.00 0.02 N
ATOM 21 C2 G A2588 -79.464 -29.398 15.548 1.00 0.02 C
ATOM 22 N2 G A2588 -78.739 -30.299 16.221 1.00 0.02 N
ATOM 23 N3 G A2588 -80.764 -29.448 15.559 1.00 0.02 N
ATOM 24 C4 G A2588 -81.303 -28.484 14.846 1.00 0.02 C
ATOM 25 P U A2589 -86.012 -25.724 17.922 1.00 0.01 P
ATOM 26 OP1 U A2589 -86.746 -25.727 19.218 1.00 0.01 O
ATOM 27 OP2 U A2589 -86.532 -24.918 16.803 1.00 0.01 O
ATOM 28 O5' U A2589 -84.478 -25.374 18.176 1.00 0.01 O
TER
ATOM 1 O3' G B2590 -76.129 -28.062 18.966 1.00 0.01 O
ATOM 2 P A B2591 -75.482 -29.018 17.874 1.00 0.01 P
ATOM 3 OP1 A B2591 -74.074 -28.583 17.691 1.00 0.01 O
ATOM 4 OP2 A B2591 -76.391 -29.045 16.712 1.00 0.01 O
ATOM 5 O5' A B2591 -75.501 -30.396 18.589 1.00 0.01 O
ATOM 6 C5' A B2591 -74.360 -30.863 19.244 1.00 0.01 C
ATOM 7 C4' A B2591 -74.665 -32.147 19.890 1.00 0.01 C
ATOM 8 O4' A B2591 -76.020 -32.105 20.362 1.00 0.01 O
ATOM 9 C3' A B2591 -74.634 -33.332 18.984 1.00 0.01 C
ATOM 10 O3' A B2591 -73.329 -33.817 18.826 1.00 0.01 O
ATOM 11 C2' A B2591 -75.555 -34.305 19.692 1.00 0.01 C
ATOM 12 O2' A B2591 -74.865 -34.939 20.759 1.00 0.01 O
ATOM 13 C1' A B2591 -76.590 -33.372 20.300 1.00 0.01 C
ATOM 14 N9 A B2591 -77.866 -33.297 19.542 1.00 0.01 N
ATOM 15 C8 A B2591 -78.319 -32.667 18.402 1.00 0.01 C
ATOM 16 N7 A B2591 -79.602 -32.841 18.148 1.00 0.01 N
ATOM 17 C5 A B2591 -80.029 -33.613 19.202 1.00 0.01 C
ATOM 18 C6 A B2591 -81.253 -34.192 19.581 1.00 0.01 C
ATOM 19 N6 A B2591 -82.429 -34.115 18.962 1.00 0.01 N
ATOM 20 N1 A B2591 -81.270 -34.915 20.700 1.00 0.01 N
ATOM 21 C2 A B2591 -80.150 -35.052 21.399 1.00 0.01 C
ATOM 22 N3 A B2591 -78.959 -34.567 21.153 1.00 0.01 N
ATOM 23 C4 A B2591 -78.975 -33.869 20.040 1.00 0.01 C
ATOM 24 P G B2592 -72.743 -34.098 17.371 1.00 0.01 P
ATOM 25 OP1 G B2592 -71.347 -34.541 17.538 1.00 0.01 O
ATOM 26 OP2 G B2592 -73.002 -32.908 16.573 1.00 0.01 O
ATOM 27 O5' G B2592 -73.633 -35.305 16.871 1.00 0.01 O
TER
ATOM 2 P G A2588 -87.199 -25.847 12.668 1.00 0.01 P
ATOM 3 OP1 G A2588 -88.591 -25.566 13.063 1.00 0.01 O
ATOM 4 OP2 G A2588 -86.378 -24.749 12.101 1.00 0.01 O
ATOM 5 O5' G A2588 -86.426 -26.540 13.862 1.00 0.01 O
ATOM 6 C5' G A2588 -86.967 -27.689 14.485 1.00 0.01 C
ATOM 7 C4' G A2588 -85.954 -28.402 15.325 1.00 0.01 C
ATOM 8 O4' G A2588 -84.901 -28.929 14.503 1.00 0.01 O
ATOM 9 C3' G A2588 -85.206 -27.564 16.320 1.00 0.01 C
ATOM 10 O3' G A2588 -85.973 -27.231 17.428 1.00 0.01 O
ATOM 11 C2' G A2588 -84.052 -28.463 16.654 1.00 0.01 C
ATOM 12 O2' G A2588 -84.483 -29.525 17.480 1.00 0.01 O
ATOM 13 C1' G A2588 -83.725 -29.028 15.282 1.00 0.01 C
ATOM 14 N9 G A2588 -82.641 -28.264 14.651 1.00 0.02 N
ATOM 15 C8 G A2588 -82.747 -27.166 13.859 1.00 0.02 C
ATOM 16 N7 G A2588 -81.581 -26.699 13.515 1.00 0.02 N
ATOM 17 C5 G A2588 -80.667 -27.532 14.139 1.00 0.02 C
ATOM 18 C6 G A2588 -79.269 -27.505 14.149 1.00 0.02 C
ATOM 19 O6 G A2588 -78.499 -26.742 13.596 1.00 0.02 O
ATOM 20 N1 G A2588 -78.736 -28.490 14.895 1.00 0.02 N
ATOM 21 C2 G A2588 -79.464 -29.398 15.548 1.00 0.02 C
ATOM 22 N2 G A2588 -78.739 -30.299 16.221 1.00 0.02 N
ATOM 23 N3 G A2588 -80.764 -29.448 15.559 1.00 0.02 N
ATOM 24 C4 G A2588 -81.303 -28.484 14.846 1.00 0.02 C
ATOM 25 P U A2589 -86.012 -25.724 17.922 1.00 0.01 P
ATOM 26 OP1 U A2589 -86.746 -25.727 19.218 1.00 0.01 O
ATOM 27 OP2 U A2589 -86.532 -24.918 16.803 1.00 0.01 O
ATOM 28 O5' U A2589 -84.478 -25.374 18.176 1.00 0.01 O
TER
ATOM 1 O3' G B2590 -76.129 -28.062 18.966 1.00 0.01 O
ATOM 2 P A B2591 -75.482 -29.018 17.874 1.00 0.01 P
ATOM 3 OP1 A B2591 -74.074 -28.583 17.691 1.00 0.01 O
ATOM 4 OP2 A B2591 -76.391 -29.045 16.712 1.00 0.01 O
ATOM 5 O5' A B2591 -75.501 -30.396 18.589 1.00 0.01 O
ATOM 6 C5' A B2591 -74.360 -30.863 19.244 1.00 0.01 C
ATOM 7 C4' A B2591 -74.665 -32.147 19.890 1.00 0.01 C
ATOM 8 O4' A B2591 -76.020 -32.105 20.362 1.00 0.01 O
ATOM 9 C3' A B2591 -74.634 -33.332 18.984 1.00 0.01 C
ATOM 10 O3' A B2591 -73.329 -33.817 18.826 1.00 0.01 O
ATOM 11 C2' A B2591 -75.555 -34.305 19.692 1.00 0.01 C
ATOM 12 O2' A B2591 -74.865 -34.939 20.759 1.00 0.01 O
ATOM 13 C1' A B2591 -76.590 -33.372 20.300 1.00 0.01 C
ATOM 14 N9 A B2591 -77.866 -33.297 19.542 1.00 0.01 N
ATOM 15 C8 A B2591 -78.319 -32.667 18.402 1.00 0.01 C
ATOM 16 N7 A B2591 -79.602 -32.841 18.148 1.00 0.01 N
ATOM 17 C5 A B2591 -80.029 -33.613 19.202 1.00 0.01 C
ATOM 18 C6 A B2591 -81.253 -34.192 19.581 1.00 0.01 C
ATOM 19 N6 A B2591 -82.429 -34.115 18.962 1.00 0.01 N
ATOM 20 N1 A B2591 -81.270 -34.915 20.700 1.00 0.01 N
ATOM 21 C2 A B2591 -80.150 -35.052 21.399 1.00 0.01 C
ATOM 22 N3 A B2591 -78.959 -34.567 21.153 1.00 0.01 N
ATOM 23 C4 A B2591 -78.975 -33.869 20.040 1.00 0.01 C
ATOM 24 P G B2592 -72.743 -34.098 17.371 1.00 0.01 P
ATOM 25 OP1 G B2592 -71.347 -34.541 17.538 1.00 0.01 O
ATOM 26 OP2 G B2592 -73.002 -32.908 16.573 1.00 0.01 O
ATOM 27 O5' G B2592 -73.633 -35.305 16.871 1.00 0.01 O
TER
Atoms:
OP1: (-88.591,-25.566,13.063)
OP2: (-86.378,-24.749,12.101)
C3': (-85.206,-27.564,16.320)
C1': (-83.725,-29.028,15.282)
C5': (-86.967,-27.689,14.485)
O6: (-78.499,-26.742,13.596)
O4': (-84.901,-28.929,14.503)
C8: (-82.747,-27.166,13.859)
C2: (-79.464,-29.398,15.548)
C6: (-79.269,-27.505,14.149)
C5: (-80.667,-27.532,14.139)
C4: (-81.303,-28.484,14.846)
P: (-87.199,-25.847,12.668)
C4': (-85.954,-28.402,15.325)
C2': (-84.052,-28.463,16.654)
O2': (-84.483,-29.525,17.480)
N1: (-78.736,-28.490,14.895)
N2: (-78.739,-30.299,16.221)
N3: (-80.764,-29.448,15.559)
N7: (-81.581,-26.699,13.515)
N9: (-82.641,-28.264,14.651)
O5': (-86.426,-26.540,13.862)
O3': (-85.973,-27.231,17.428)
OP2: (-86.378,-24.749,12.101)
C3': (-85.206,-27.564,16.320)
C1': (-83.725,-29.028,15.282)
C5': (-86.967,-27.689,14.485)
O6: (-78.499,-26.742,13.596)
O4': (-84.901,-28.929,14.503)
C8: (-82.747,-27.166,13.859)
C2: (-79.464,-29.398,15.548)
C6: (-79.269,-27.505,14.149)
C5: (-80.667,-27.532,14.139)
C4: (-81.303,-28.484,14.846)
P: (-87.199,-25.847,12.668)
C4': (-85.954,-28.402,15.325)
C2': (-84.052,-28.463,16.654)
O2': (-84.483,-29.525,17.480)
N1: (-78.736,-28.490,14.895)
N2: (-78.739,-30.299,16.221)
N3: (-80.764,-29.448,15.559)
N7: (-81.581,-26.699,13.515)
N9: (-82.641,-28.264,14.651)
O5': (-86.426,-26.540,13.862)
O3': (-85.973,-27.231,17.428)
OP1: (-74.074,-28.583,17.691)
OP2: (-76.391,-29.045,16.712)
C3': (-74.634,-33.332,18.984)
C1': (-76.590,-33.372,20.300)
C5': (-74.360,-30.863,19.244)
O4': (-76.020,-32.105,20.362)
C8: (-78.319,-32.667,18.402)
O2': (-74.865,-34.939,20.759)
C6: (-81.253,-34.192,19.581)
C5: (-80.029,-33.613,19.202)
C4: (-78.975,-33.869,20.040)
P: (-75.482,-29.018,17.874)
C4': (-74.665,-32.147,19.890)
C2': (-75.555,-34.305,19.692)
C2: (-80.150,-35.052,21.399)
N1: (-81.270,-34.915,20.700)
N3: (-78.959,-34.567,21.153)
N6: (-82.429,-34.115,18.962)
N7: (-79.602,-32.841,18.148)
N9: (-77.866,-33.297,19.542)
O5': (-75.501,-30.396,18.589)
O3': (-73.329,-33.817,18.826)
OP2: (-76.391,-29.045,16.712)
C3': (-74.634,-33.332,18.984)
C1': (-76.590,-33.372,20.300)
C5': (-74.360,-30.863,19.244)
O4': (-76.020,-32.105,20.362)
C8: (-78.319,-32.667,18.402)
O2': (-74.865,-34.939,20.759)
C6: (-81.253,-34.192,19.581)
C5: (-80.029,-33.613,19.202)
C4: (-78.975,-33.869,20.040)
P: (-75.482,-29.018,17.874)
C4': (-74.665,-32.147,19.890)
C2': (-75.555,-34.305,19.692)
C2: (-80.150,-35.052,21.399)
N1: (-81.270,-34.915,20.700)
N3: (-78.959,-34.567,21.153)
N6: (-82.429,-34.115,18.962)
N7: (-79.602,-32.841,18.148)
N9: (-77.866,-33.297,19.542)
O5': (-75.501,-30.396,18.589)
O3': (-73.329,-33.817,18.826)
Image (generated by PyMOL):