Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0457:0460
Extra
PDB:
ATOM 1 O3' U A 456 64.069 145.996 66.601 1.00 29.65 O
ATOM 2 P G A 457 65.482 146.738 66.408 1.00 28.51 P
ATOM 3 OP1 G A 457 66.035 147.008 67.752 1.00 28.31 O
ATOM 4 OP2 G A 457 65.283 147.860 65.458 1.00 25.96 O
ATOM 5 O5' G A 457 66.403 145.649 65.703 1.00 26.46 O
ATOM 6 C5' G A 457 66.886 144.517 66.436 1.00 26.38 C
ATOM 7 C4' G A 457 67.690 143.602 65.540 1.00 26.07 C
ATOM 8 O4' G A 457 66.829 143.039 64.517 1.00 28.03 O
ATOM 9 C3' G A 457 68.817 144.233 64.740 1.00 25.56 C
ATOM 10 O3' G A 457 69.984 144.429 65.528 1.00 28.79 O
ATOM 11 C2' G A 457 69.041 143.194 63.648 1.00 25.91 C
ATOM 12 O2' G A 457 69.841 142.105 64.060 1.00 25.84 O
ATOM 13 C1' G A 457 67.606 142.722 63.375 1.00 25.11 C
ATOM 14 N9 G A 457 67.035 143.386 62.209 1.00 22.31 N
ATOM 15 C8 G A 457 66.233 144.504 62.177 1.00 22.03 C
ATOM 16 N7 G A 457 65.979 144.913 60.962 1.00 19.80 N
ATOM 17 C5 G A 457 66.640 144.001 60.150 1.00 20.24 C
ATOM 18 C6 G A 457 66.770 143.950 58.743 1.00 22.31 C
ATOM 19 O6 G A 457 66.327 144.741 57.898 1.00 25.21 O
ATOM 20 N1 G A 457 67.515 142.843 58.338 1.00 20.63 N
ATOM 21 C2 G A 457 68.061 141.909 59.180 1.00 19.92 C
ATOM 22 N2 G A 457 68.700 140.888 58.600 1.00 19.68 N
ATOM 23 N3 G A 457 67.976 141.966 60.491 1.00 19.60 N
ATOM 24 C4 G A 457 67.259 143.031 60.905 1.00 20.83 C
ATOM 25 P U A 458 70.737 145.853 65.507 1.00 30.16 P
ATOM 26 OP1 U A 458 71.723 145.856 66.609 1.00 33.08 O
ATOM 27 OP2 U A 458 69.718 146.923 65.441 1.00 31.19 O
ATOM 28 O5' U A 458 71.534 145.849 64.131 1.00 27.78 O
TER
ATOM 1 O3' G B 459 71.345 142.366 55.713 1.00 26.50 O
ATOM 2 P A B 460 70.006 141.622 55.220 1.00 26.96 P
ATOM 3 OP1 A B 460 69.753 141.979 53.811 1.00 23.30 O
ATOM 4 OP2 A B 460 68.945 141.852 56.234 1.00 21.79 O
ATOM 5 O5' A B 460 70.417 140.086 55.250 1.00 23.75 O
ATOM 6 C5' A B 460 71.219 139.517 54.212 1.00 22.35 C
ATOM 7 C4' A B 460 71.598 138.105 54.579 1.00 24.60 C
ATOM 8 O4' A B 460 72.285 138.153 55.855 1.00 25.54 O
ATOM 9 C3' A B 460 70.458 137.118 54.815 1.00 24.07 C
ATOM 10 O3' A B 460 70.045 136.486 53.609 1.00 26.55 O
ATOM 11 C2' A B 460 71.136 136.084 55.699 1.00 25.23 C
ATOM 12 O2' A B 460 71.972 135.226 54.941 1.00 25.00 O
ATOM 13 C1' A B 460 72.023 136.968 56.583 1.00 24.14 C
ATOM 14 N9 A B 460 71.433 137.336 57.871 1.00 21.96 N
ATOM 15 C8 A B 460 70.395 138.204 58.116 1.00 22.11 C
ATOM 16 N7 A B 460 70.099 138.332 59.387 1.00 19.29 N
ATOM 17 C5 A B 460 70.999 137.495 60.024 1.00 18.13 C
ATOM 18 C6 A B 460 71.204 137.192 61.375 1.00 17.02 C
ATOM 19 N6 A B 460 70.489 137.718 62.363 1.00 16.40 N
ATOM 20 N1 A B 460 72.183 136.320 61.681 1.00 16.63 N
ATOM 21 C2 A B 460 72.909 135.793 60.683 1.00 20.11 C
ATOM 22 N3 A B 460 72.815 136.000 59.370 1.00 21.05 N
ATOM 23 C4 A B 460 71.828 136.873 59.103 1.00 21.22 C
ATOM 24 P A B 461 68.599 136.795 52.973 1.00 30.34 P
ATOM 25 OP1 A B 461 68.591 135.996 51.735 1.00 29.95 O
ATOM 26 OP2 A B 461 68.370 138.259 52.895 1.00 33.37 O
ATOM 27 O5' A B 461 67.503 136.253 54.005 1.00 29.71 O
TER
ATOM 2 P G A 457 65.482 146.738 66.408 1.00 28.51 P
ATOM 3 OP1 G A 457 66.035 147.008 67.752 1.00 28.31 O
ATOM 4 OP2 G A 457 65.283 147.860 65.458 1.00 25.96 O
ATOM 5 O5' G A 457 66.403 145.649 65.703 1.00 26.46 O
ATOM 6 C5' G A 457 66.886 144.517 66.436 1.00 26.38 C
ATOM 7 C4' G A 457 67.690 143.602 65.540 1.00 26.07 C
ATOM 8 O4' G A 457 66.829 143.039 64.517 1.00 28.03 O
ATOM 9 C3' G A 457 68.817 144.233 64.740 1.00 25.56 C
ATOM 10 O3' G A 457 69.984 144.429 65.528 1.00 28.79 O
ATOM 11 C2' G A 457 69.041 143.194 63.648 1.00 25.91 C
ATOM 12 O2' G A 457 69.841 142.105 64.060 1.00 25.84 O
ATOM 13 C1' G A 457 67.606 142.722 63.375 1.00 25.11 C
ATOM 14 N9 G A 457 67.035 143.386 62.209 1.00 22.31 N
ATOM 15 C8 G A 457 66.233 144.504 62.177 1.00 22.03 C
ATOM 16 N7 G A 457 65.979 144.913 60.962 1.00 19.80 N
ATOM 17 C5 G A 457 66.640 144.001 60.150 1.00 20.24 C
ATOM 18 C6 G A 457 66.770 143.950 58.743 1.00 22.31 C
ATOM 19 O6 G A 457 66.327 144.741 57.898 1.00 25.21 O
ATOM 20 N1 G A 457 67.515 142.843 58.338 1.00 20.63 N
ATOM 21 C2 G A 457 68.061 141.909 59.180 1.00 19.92 C
ATOM 22 N2 G A 457 68.700 140.888 58.600 1.00 19.68 N
ATOM 23 N3 G A 457 67.976 141.966 60.491 1.00 19.60 N
ATOM 24 C4 G A 457 67.259 143.031 60.905 1.00 20.83 C
ATOM 25 P U A 458 70.737 145.853 65.507 1.00 30.16 P
ATOM 26 OP1 U A 458 71.723 145.856 66.609 1.00 33.08 O
ATOM 27 OP2 U A 458 69.718 146.923 65.441 1.00 31.19 O
ATOM 28 O5' U A 458 71.534 145.849 64.131 1.00 27.78 O
TER
ATOM 1 O3' G B 459 71.345 142.366 55.713 1.00 26.50 O
ATOM 2 P A B 460 70.006 141.622 55.220 1.00 26.96 P
ATOM 3 OP1 A B 460 69.753 141.979 53.811 1.00 23.30 O
ATOM 4 OP2 A B 460 68.945 141.852 56.234 1.00 21.79 O
ATOM 5 O5' A B 460 70.417 140.086 55.250 1.00 23.75 O
ATOM 6 C5' A B 460 71.219 139.517 54.212 1.00 22.35 C
ATOM 7 C4' A B 460 71.598 138.105 54.579 1.00 24.60 C
ATOM 8 O4' A B 460 72.285 138.153 55.855 1.00 25.54 O
ATOM 9 C3' A B 460 70.458 137.118 54.815 1.00 24.07 C
ATOM 10 O3' A B 460 70.045 136.486 53.609 1.00 26.55 O
ATOM 11 C2' A B 460 71.136 136.084 55.699 1.00 25.23 C
ATOM 12 O2' A B 460 71.972 135.226 54.941 1.00 25.00 O
ATOM 13 C1' A B 460 72.023 136.968 56.583 1.00 24.14 C
ATOM 14 N9 A B 460 71.433 137.336 57.871 1.00 21.96 N
ATOM 15 C8 A B 460 70.395 138.204 58.116 1.00 22.11 C
ATOM 16 N7 A B 460 70.099 138.332 59.387 1.00 19.29 N
ATOM 17 C5 A B 460 70.999 137.495 60.024 1.00 18.13 C
ATOM 18 C6 A B 460 71.204 137.192 61.375 1.00 17.02 C
ATOM 19 N6 A B 460 70.489 137.718 62.363 1.00 16.40 N
ATOM 20 N1 A B 460 72.183 136.320 61.681 1.00 16.63 N
ATOM 21 C2 A B 460 72.909 135.793 60.683 1.00 20.11 C
ATOM 22 N3 A B 460 72.815 136.000 59.370 1.00 21.05 N
ATOM 23 C4 A B 460 71.828 136.873 59.103 1.00 21.22 C
ATOM 24 P A B 461 68.599 136.795 52.973 1.00 30.34 P
ATOM 25 OP1 A B 461 68.591 135.996 51.735 1.00 29.95 O
ATOM 26 OP2 A B 461 68.370 138.259 52.895 1.00 33.37 O
ATOM 27 O5' A B 461 67.503 136.253 54.005 1.00 29.71 O
TER
Atoms:
OP1: (66.035,147.008,67.752)
OP2: (65.283,147.860,65.458)
C3': (68.817,144.233,64.740)
C1': (67.606,142.722,63.375)
C5': (66.886,144.517,66.436)
O6: (66.327,144.741,57.898)
O4': (66.829,143.039,64.517)
C8: (66.233,144.504,62.177)
C2: (68.061,141.909,59.180)
C6: (66.770,143.950,58.743)
C5: (66.640,144.001,60.150)
C4: (67.259,143.031,60.905)
P: (65.482,146.738,66.408)
C4': (67.690,143.602,65.540)
C2': (69.041,143.194,63.648)
O2': (69.841,142.105,64.060)
N1: (67.515,142.843,58.338)
N2: (68.700,140.888,58.600)
N3: (67.976,141.966,60.491)
N7: (65.979,144.913,60.962)
N9: (67.035,143.386,62.209)
O5': (66.403,145.649,65.703)
O3': (69.984,144.429,65.528)
OP2: (65.283,147.860,65.458)
C3': (68.817,144.233,64.740)
C1': (67.606,142.722,63.375)
C5': (66.886,144.517,66.436)
O6: (66.327,144.741,57.898)
O4': (66.829,143.039,64.517)
C8: (66.233,144.504,62.177)
C2: (68.061,141.909,59.180)
C6: (66.770,143.950,58.743)
C5: (66.640,144.001,60.150)
C4: (67.259,143.031,60.905)
P: (65.482,146.738,66.408)
C4': (67.690,143.602,65.540)
C2': (69.041,143.194,63.648)
O2': (69.841,142.105,64.060)
N1: (67.515,142.843,58.338)
N2: (68.700,140.888,58.600)
N3: (67.976,141.966,60.491)
N7: (65.979,144.913,60.962)
N9: (67.035,143.386,62.209)
O5': (66.403,145.649,65.703)
O3': (69.984,144.429,65.528)
OP1: (69.753,141.979,53.811)
OP2: (68.945,141.852,56.234)
C3': (70.458,137.118,54.815)
C1': (72.023,136.968,56.583)
C5': (71.219,139.517,54.212)
O4': (72.285,138.153,55.855)
C8: (70.395,138.204,58.116)
O2': (71.972,135.226,54.941)
C6: (71.204,137.192,61.375)
C5: (70.999,137.495,60.024)
C4: (71.828,136.873,59.103)
P: (70.006,141.622,55.220)
C4': (71.598,138.105,54.579)
C2': (71.136,136.084,55.699)
C2: (72.909,135.793,60.683)
N1: (72.183,136.320,61.681)
N3: (72.815,136.000,59.370)
N6: (70.489,137.718,62.363)
N7: (70.099,138.332,59.387)
N9: (71.433,137.336,57.871)
O5': (70.417,140.086,55.250)
O3': (70.045,136.486,53.609)
OP2: (68.945,141.852,56.234)
C3': (70.458,137.118,54.815)
C1': (72.023,136.968,56.583)
C5': (71.219,139.517,54.212)
O4': (72.285,138.153,55.855)
C8: (70.395,138.204,58.116)
O2': (71.972,135.226,54.941)
C6: (71.204,137.192,61.375)
C5: (70.999,137.495,60.024)
C4: (71.828,136.873,59.103)
P: (70.006,141.622,55.220)
C4': (71.598,138.105,54.579)
C2': (71.136,136.084,55.699)
C2: (72.909,135.793,60.683)
N1: (72.183,136.320,61.681)
N3: (72.815,136.000,59.370)
N6: (70.489,137.718,62.363)
N7: (70.099,138.332,59.387)
N9: (71.433,137.336,57.871)
O5': (70.417,140.086,55.250)
O3': (70.045,136.486,53.609)
Image (generated by PyMOL):