Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A2406:A2354
Extra
PDB:
ATOM 1 O3' U A2405 86.515 -66.624 -12.065 1.00 41.62 O
ATOM 2 P C A2406 86.448 -65.950 -13.530 1.00 44.04 P
ATOM 3 OP1 C A2406 85.121 -66.379 -14.023 1.00 48.42 O
ATOM 4 OP2 C A2406 87.670 -66.333 -14.304 1.00 34.92 O
ATOM 5 O5' C A2406 86.424 -64.358 -13.285 1.00 35.08 O
ATOM 6 C5' C A2406 85.225 -63.692 -12.842 1.00 36.34 C
ATOM 7 C4' C A2406 84.905 -62.498 -13.726 1.00 37.13 C
ATOM 8 O4' C A2406 85.776 -61.379 -13.476 1.00 43.65 O
ATOM 9 C3' C A2406 84.997 -62.734 -15.219 1.00 32.32 C
ATOM 10 O3' C A2406 83.715 -63.194 -15.590 1.00 29.12 O
ATOM 11 C2' C A2406 85.258 -61.346 -15.817 1.00 38.70 C
ATOM 12 O2' C A2406 84.107 -60.738 -16.373 1.00 39.87 O
ATOM 13 C1' C A2406 85.775 -60.545 -14.616 1.00 38.81 C
ATOM 14 N1 C A2406 87.096 -59.935 -14.713 1.00 37.22 N
ATOM 15 C2 C A2406 87.411 -58.980 -13.783 1.00 37.50 C
ATOM 16 O2 C A2406 86.542 -58.637 -12.979 1.00 39.85 O
ATOM 17 N3 C A2406 88.651 -58.449 -13.762 1.00 38.24 N
ATOM 18 C4 C A2406 89.561 -58.855 -14.637 1.00 36.19 C
ATOM 19 N4 C A2406 90.772 -58.328 -14.552 1.00 37.61 N
ATOM 20 C5 C A2406 89.261 -59.820 -15.632 1.00 40.76 C
ATOM 21 C6 C A2406 88.016 -60.320 -15.644 1.00 44.37 C
ATOM 22 P G A2407 83.487 -63.854 -17.019 1.00 38.13 P
ATOM 23 OP1 G A2407 84.618 -64.792 -17.336 1.00 35.35 O
ATOM 24 OP2 G A2407 83.143 -62.745 -17.955 1.00 34.02 O
ATOM 25 O5' G A2407 82.204 -64.764 -16.770 1.00 31.43 O
TER
ATOM 1 O3' A B2353 97.767 -61.252 -18.612 1.00 37.07 O
ATOM 2 P U B2354 98.344 -60.322 -17.429 1.00 42.36 P
ATOM 3 OP1 U B2354 99.775 -60.056 -17.666 1.00 35.13 O
ATOM 4 OP2 U B2354 97.902 -60.914 -16.127 1.00 40.78 O
ATOM 5 O5' U B2354 97.648 -58.899 -17.553 1.00 33.87 O
ATOM 6 C5' U B2354 98.193 -57.803 -16.808 1.00 36.36 C
ATOM 7 C4' U B2354 97.136 -57.134 -15.948 1.00 37.43 C
ATOM 8 O4' U B2354 96.276 -56.362 -16.816 1.00 48.24 O
ATOM 9 C3' U B2354 96.240 -58.046 -15.123 1.00 36.06 C
ATOM 10 O3' U B2354 95.813 -57.384 -13.909 1.00 35.33 O
ATOM 11 C2' U B2354 95.046 -58.240 -16.073 1.00 35.84 C
ATOM 12 O2' U B2354 93.817 -58.456 -15.432 1.00 39.87 O
ATOM 13 C1' U B2354 94.987 -56.923 -16.849 1.00 34.72 C
ATOM 14 N1 U B2354 94.643 -57.094 -18.271 1.00 35.43 N
ATOM 15 C2 U B2354 93.615 -56.331 -18.809 1.00 35.13 C
ATOM 16 O2 U B2354 92.982 -55.517 -18.152 1.00 42.87 O
ATOM 17 N3 U B2354 93.364 -56.544 -20.149 1.00 30.96 N
ATOM 18 C4 U B2354 94.030 -57.416 -20.998 1.00 36.61 C
ATOM 19 O4 U B2354 93.665 -57.534 -22.181 1.00 37.02 O
ATOM 20 C5 U B2354 95.086 -58.154 -20.375 1.00 41.71 C
ATOM 21 C6 U B2354 95.345 -57.980 -19.071 1.00 42.32 C
ATOM 22 P A B2355 96.688 -57.459 -12.546 1.00 41.76 P
ATOM 23 OP1 A B2355 98.124 -57.305 -12.883 1.00 43.43 O
ATOM 24 OP2 A B2355 96.268 -58.550 -11.642 1.00 40.11 O
ATOM 25 O5' A B2355 96.233 -56.140 -11.780 1.00 41.77 O
TER
ATOM 2 P C A2406 86.448 -65.950 -13.530 1.00 44.04 P
ATOM 3 OP1 C A2406 85.121 -66.379 -14.023 1.00 48.42 O
ATOM 4 OP2 C A2406 87.670 -66.333 -14.304 1.00 34.92 O
ATOM 5 O5' C A2406 86.424 -64.358 -13.285 1.00 35.08 O
ATOM 6 C5' C A2406 85.225 -63.692 -12.842 1.00 36.34 C
ATOM 7 C4' C A2406 84.905 -62.498 -13.726 1.00 37.13 C
ATOM 8 O4' C A2406 85.776 -61.379 -13.476 1.00 43.65 O
ATOM 9 C3' C A2406 84.997 -62.734 -15.219 1.00 32.32 C
ATOM 10 O3' C A2406 83.715 -63.194 -15.590 1.00 29.12 O
ATOM 11 C2' C A2406 85.258 -61.346 -15.817 1.00 38.70 C
ATOM 12 O2' C A2406 84.107 -60.738 -16.373 1.00 39.87 O
ATOM 13 C1' C A2406 85.775 -60.545 -14.616 1.00 38.81 C
ATOM 14 N1 C A2406 87.096 -59.935 -14.713 1.00 37.22 N
ATOM 15 C2 C A2406 87.411 -58.980 -13.783 1.00 37.50 C
ATOM 16 O2 C A2406 86.542 -58.637 -12.979 1.00 39.85 O
ATOM 17 N3 C A2406 88.651 -58.449 -13.762 1.00 38.24 N
ATOM 18 C4 C A2406 89.561 -58.855 -14.637 1.00 36.19 C
ATOM 19 N4 C A2406 90.772 -58.328 -14.552 1.00 37.61 N
ATOM 20 C5 C A2406 89.261 -59.820 -15.632 1.00 40.76 C
ATOM 21 C6 C A2406 88.016 -60.320 -15.644 1.00 44.37 C
ATOM 22 P G A2407 83.487 -63.854 -17.019 1.00 38.13 P
ATOM 23 OP1 G A2407 84.618 -64.792 -17.336 1.00 35.35 O
ATOM 24 OP2 G A2407 83.143 -62.745 -17.955 1.00 34.02 O
ATOM 25 O5' G A2407 82.204 -64.764 -16.770 1.00 31.43 O
TER
ATOM 1 O3' A B2353 97.767 -61.252 -18.612 1.00 37.07 O
ATOM 2 P U B2354 98.344 -60.322 -17.429 1.00 42.36 P
ATOM 3 OP1 U B2354 99.775 -60.056 -17.666 1.00 35.13 O
ATOM 4 OP2 U B2354 97.902 -60.914 -16.127 1.00 40.78 O
ATOM 5 O5' U B2354 97.648 -58.899 -17.553 1.00 33.87 O
ATOM 6 C5' U B2354 98.193 -57.803 -16.808 1.00 36.36 C
ATOM 7 C4' U B2354 97.136 -57.134 -15.948 1.00 37.43 C
ATOM 8 O4' U B2354 96.276 -56.362 -16.816 1.00 48.24 O
ATOM 9 C3' U B2354 96.240 -58.046 -15.123 1.00 36.06 C
ATOM 10 O3' U B2354 95.813 -57.384 -13.909 1.00 35.33 O
ATOM 11 C2' U B2354 95.046 -58.240 -16.073 1.00 35.84 C
ATOM 12 O2' U B2354 93.817 -58.456 -15.432 1.00 39.87 O
ATOM 13 C1' U B2354 94.987 -56.923 -16.849 1.00 34.72 C
ATOM 14 N1 U B2354 94.643 -57.094 -18.271 1.00 35.43 N
ATOM 15 C2 U B2354 93.615 -56.331 -18.809 1.00 35.13 C
ATOM 16 O2 U B2354 92.982 -55.517 -18.152 1.00 42.87 O
ATOM 17 N3 U B2354 93.364 -56.544 -20.149 1.00 30.96 N
ATOM 18 C4 U B2354 94.030 -57.416 -20.998 1.00 36.61 C
ATOM 19 O4 U B2354 93.665 -57.534 -22.181 1.00 37.02 O
ATOM 20 C5 U B2354 95.086 -58.154 -20.375 1.00 41.71 C
ATOM 21 C6 U B2354 95.345 -57.980 -19.071 1.00 42.32 C
ATOM 22 P A B2355 96.688 -57.459 -12.546 1.00 41.76 P
ATOM 23 OP1 A B2355 98.124 -57.305 -12.883 1.00 43.43 O
ATOM 24 OP2 A B2355 96.268 -58.550 -11.642 1.00 40.11 O
ATOM 25 O5' A B2355 96.233 -56.140 -11.780 1.00 41.77 O
TER
Atoms:
C2: (87.411,-58.980,-13.783)
OP1: (85.121,-66.379,-14.023)
OP2: (87.670,-66.333,-14.304)
C4: (89.561,-58.855,-14.637)
O5': (86.424,-64.358,-13.285)
C3': (84.997,-62.734,-15.219)
C1': (85.775,-60.545,-14.616)
O4': (85.776,-61.379,-13.476)
C5': (85.225,-63.692,-12.842)
P: (86.448,-65.950,-13.530)
O2: (86.542,-58.637,-12.979)
C4': (84.905,-62.498,-13.726)
C2': (85.258,-61.346,-15.817)
O2': (84.107,-60.738,-16.373)
N1: (87.096,-59.935,-14.713)
N3: (88.651,-58.449,-13.762)
N4: (90.772,-58.328,-14.552)
C6: (88.016,-60.320,-15.644)
C5: (89.261,-59.820,-15.632)
O3': (83.715,-63.194,-15.590)
OP1: (85.121,-66.379,-14.023)
OP2: (87.670,-66.333,-14.304)
C4: (89.561,-58.855,-14.637)
O5': (86.424,-64.358,-13.285)
C3': (84.997,-62.734,-15.219)
C1': (85.775,-60.545,-14.616)
O4': (85.776,-61.379,-13.476)
C5': (85.225,-63.692,-12.842)
P: (86.448,-65.950,-13.530)
O2: (86.542,-58.637,-12.979)
C4': (84.905,-62.498,-13.726)
C2': (85.258,-61.346,-15.817)
O2': (84.107,-60.738,-16.373)
N1: (87.096,-59.935,-14.713)
N3: (88.651,-58.449,-13.762)
N4: (90.772,-58.328,-14.552)
C6: (88.016,-60.320,-15.644)
C5: (89.261,-59.820,-15.632)
O3': (83.715,-63.194,-15.590)
C4: (94.030,-57.416,-20.998)
N3: (93.364,-56.544,-20.149)
OP1: (99.775,-60.056,-17.666)
OP2: (97.902,-60.914,-16.127)
C2: (93.615,-56.331,-18.809)
C1': (94.987,-56.923,-16.849)
C3': (96.240,-58.046,-15.123)
O5': (97.648,-58.899,-17.553)
O4': (96.276,-56.362,-16.816)
C5': (98.193,-57.803,-16.808)
P: (98.344,-60.322,-17.429)
C4': (97.136,-57.134,-15.948)
C2': (95.046,-58.240,-16.073)
O2': (93.817,-58.456,-15.432)
N1: (94.643,-57.094,-18.271)
O4: (93.665,-57.534,-22.181)
O2: (92.982,-55.517,-18.152)
C6: (95.345,-57.980,-19.071)
C5: (95.086,-58.154,-20.375)
O3': (95.813,-57.384,-13.909)
N3: (93.364,-56.544,-20.149)
OP1: (99.775,-60.056,-17.666)
OP2: (97.902,-60.914,-16.127)
C2: (93.615,-56.331,-18.809)
C1': (94.987,-56.923,-16.849)
C3': (96.240,-58.046,-15.123)
O5': (97.648,-58.899,-17.553)
O4': (96.276,-56.362,-16.816)
C5': (98.193,-57.803,-16.808)
P: (98.344,-60.322,-17.429)
C4': (97.136,-57.134,-15.948)
C2': (95.046,-58.240,-16.073)
O2': (93.817,-58.456,-15.432)
N1: (94.643,-57.094,-18.271)
O4: (93.665,-57.534,-22.181)
O2: (92.982,-55.517,-18.152)
C6: (95.345,-57.980,-19.071)
C5: (95.086,-58.154,-20.375)
O3': (95.813,-57.384,-13.909)
Image (generated by PyMOL):