ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ6:0565:0568

Extra

PDB:
ATOM 1 O3' C A 564 1.423 81.133 133.356 1.00 97.43 O
ATOM 2 P G A 565 1.991 81.648 134.764 1.00 96.97 P
ATOM 3 OP1 G A 565 2.619 80.479 135.434 1.00 97.13 O
ATOM 4 OP2 G A 565 0.915 82.411 135.458 1.00 95.41 O
ATOM 5 O5' G A 565 3.136 82.674 134.345 1.00 96.83 O
ATOM 6 C5' G A 565 4.168 82.285 133.412 1.00 94.07 C
ATOM 7 C4' G A 565 4.999 83.480 133.008 1.00 91.96 C
ATOM 8 O4' G A 565 4.237 84.376 132.153 1.00 90.63 O
ATOM 9 C3' G A 565 5.464 84.379 134.137 1.00 91.24 C
ATOM 10 O3' G A 565 6.562 83.821 134.854 1.00 89.97 O
ATOM 11 C2' G A 565 5.814 85.656 133.382 1.00 91.30 C
ATOM 12 O2' G A 565 7.054 85.579 132.702 1.00 92.49 O
ATOM 13 C1' G A 565 4.683 85.711 132.352 1.00 90.10 C
ATOM 14 N9 G A 565 3.559 86.518 132.819 1.00 89.39 N
ATOM 15 C8 G A 565 2.368 86.065 133.328 1.00 89.14 C
ATOM 16 N7 G A 565 1.573 87.028 133.708 1.00 89.15 N
ATOM 17 C5 G A 565 2.277 88.189 133.428 1.00 88.47 C
ATOM 18 C6 G A 565 1.929 89.544 133.642 1.00 88.46 C
ATOM 19 O6 G A 565 0.900 90.002 134.152 1.00 88.15 O
ATOM 20 N1 G A 565 2.931 90.405 133.205 1.00 88.50 N
ATOM 21 C2 G A 565 4.118 90.013 132.643 1.00 88.18 C
ATOM 22 N2 G A 565 4.955 90.997 132.282 1.00 87.57 N
ATOM 23 N3 G A 565 4.460 88.750 132.447 1.00 88.74 N
ATOM 24 C4 G A 565 3.498 87.896 132.862 1.00 89.13 C
ATOM 25 P C A 566 6.503 83.740 136.460 1.00 87.76 P
ATOM 26 OP1 C A 566 7.822 83.272 136.947 1.00 88.81 O
ATOM 27 OP2 C A 566 5.280 82.978 136.812 1.00 88.81 O
ATOM 28 O5' C A 566 6.311 85.255 136.917 1.00 85.64 O
TER

ATOM 1 O3' G B 567 6.035 94.092 134.895 1.00 69.29 O
ATOM 2 P A B 568 4.986 94.441 133.731 1.00 69.04 P
ATOM 3 OP1 A B 568 4.254 95.655 134.181 1.00 68.10 O
ATOM 4 OP2 A B 568 4.230 93.217 133.356 1.00 67.98 O
ATOM 5 O5' A B 568 5.893 94.852 132.487 1.00 70.89 O
ATOM 6 C5' A B 568 6.513 96.154 132.413 1.00 70.11 C
ATOM 7 C4' A B 568 7.611 96.149 131.376 1.00 69.37 C
ATOM 8 O4' A B 568 8.552 95.090 131.700 1.00 68.34 O
ATOM 9 C3' A B 568 7.188 95.838 129.946 1.00 69.60 C
ATOM 10 O3' A B 568 6.731 97.007 129.265 1.00 69.35 O
ATOM 11 C2' A B 568 8.490 95.337 129.336 1.00 68.95 C
ATOM 12 O2' A B 568 9.366 96.394 128.991 1.00 69.91 O
ATOM 13 C1' A B 568 9.092 94.556 130.507 1.00 67.62 C
ATOM 14 N9 A B 568 8.801 93.125 130.462 1.00 66.01 N
ATOM 15 C8 A B 568 7.608 92.489 130.691 1.00 66.22 C
ATOM 16 N7 A B 568 7.667 91.186 130.547 1.00 66.61 N
ATOM 17 C5 A B 568 8.992 90.947 130.206 1.00 65.83 C
ATOM 18 C6 A B 568 9.702 89.765 129.913 1.00 64.70 C
ATOM 19 N6 A B 568 9.156 88.547 129.918 1.00 64.41 N
ATOM 20 N1 A B 568 11.013 89.880 129.609 1.00 65.02 N
ATOM 21 C2 A B 568 11.566 91.096 129.601 1.00 64.91 C
ATOM 22 N3 A B 568 11.008 92.277 129.858 1.00 67.12 N
ATOM 23 C4 A B 568 9.703 92.133 130.156 1.00 66.57 C
ATOM 24 P G B 569 5.250 97.051 128.633 1.00 68.74 P
ATOM 25 OP1 G B 569 5.237 98.169 127.657 1.00 69.51 O
ATOM 26 OP2 G B 569 4.289 97.057 129.759 1.00 71.80 O
ATOM 27 O5' G B 569 5.080 95.673 127.846 1.00 67.12 O
TER

Atoms:
OP1: (2.619,80.479,135.434)
OP2: (0.915,82.411,135.458)
C3': (5.464,84.379,134.137)
C1': (4.683,85.711,132.352)
C5': (4.168,82.285,133.412)
O6: (0.900,90.002,134.152)
O4': (4.237,84.376,132.153)
C8: (2.368,86.065,133.328)
C2: (4.118,90.013,132.643)
C6: (1.929,89.544,133.642)
C5: (2.277,88.189,133.428)
C4: (3.498,87.896,132.862)
P: (1.991,81.648,134.764)
C4': (4.999,83.480,133.008)
C2': (5.814,85.656,133.382)
O2': (7.054,85.579,132.702)
N1: (2.931,90.405,133.205)
N2: (4.955,90.997,132.282)
N3: (4.460,88.750,132.447)
N7: (1.573,87.028,133.708)
N9: (3.559,86.518,132.819)
O5': (3.136,82.674,134.345)
O3': (6.562,83.821,134.854)
OP1: (4.254,95.655,134.181)
OP2: (4.230,93.217,133.356)
C3': (7.188,95.838,129.946)
C1': (9.092,94.556,130.507)
C5': (6.513,96.154,132.413)
O4': (8.552,95.090,131.700)
C8: (7.608,92.489,130.691)
O2': (9.366,96.394,128.991)
C6: (9.702,89.765,129.913)
C5: (8.992,90.947,130.206)
C4: (9.703,92.133,130.156)
P: (4.986,94.441,133.731)
C4': (7.611,96.149,131.376)
C2': (8.490,95.337,129.336)
C2: (11.566,91.096,129.601)
N1: (11.013,89.880,129.609)
N3: (11.008,92.277,129.858)
N6: (9.156,88.547,129.918)
N7: (7.667,91.186,130.547)
N9: (8.801,93.125,130.462)
O5': (5.893,94.852,132.487)
O3': (6.731,97.007,129.265)
Image (generated by PyMOL):
PyMOL image
show in jmol