Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1216:A1219
Extra
PDB:
ATOM 1 O3' U A1215 -56.654 155.537 217.263 1.00 0.79 O
ATOM 2 P G A1216 -57.999 154.992 216.572 1.00 9.57 P
ATOM 3 OP1 G A1216 -59.119 155.838 217.073 1.00 9.57 O
ATOM 4 OP2 G A1216 -58.042 153.508 216.801 1.00 9.57 O
ATOM 5 O5' G A1216 -57.761 155.305 215.029 1.00 9.57 O
ATOM 6 C5' G A1216 -57.679 156.650 214.587 1.00 9.57 C
ATOM 7 C4' G A1216 -57.215 156.755 213.157 1.00 9.57 C
ATOM 8 O4' G A1216 -55.817 156.397 213.047 1.00 9.57 O
ATOM 9 C3' G A1216 -57.887 155.846 212.155 1.00 9.57 C
ATOM 10 O3' G A1216 -59.173 156.281 211.801 1.00 9.57 O
ATOM 11 C2' G A1216 -56.905 155.883 211.006 1.00 9.57 C
ATOM 12 O2' G A1216 -57.011 157.106 210.291 1.00 9.57 O
ATOM 13 C1' G A1216 -55.578 155.881 211.754 1.00 9.57 C
ATOM 14 N9 G A1216 -55.038 154.531 211.874 1.00 9.88 N
ATOM 15 C8 G A1216 -55.161 153.606 212.878 1.00 9.88 C
ATOM 16 N7 G A1216 -54.539 152.489 212.608 1.00 9.88 N
ATOM 17 C5 G A1216 -53.998 152.715 211.348 1.00 9.88 C
ATOM 18 C6 G A1216 -53.217 151.879 210.528 1.00 9.88 C
ATOM 19 O6 G A1216 -52.826 150.724 210.743 1.00 9.88 O
ATOM 20 N1 G A1216 -52.892 152.540 209.351 1.00 9.88 N
ATOM 21 C2 G A1216 -53.269 153.821 209.007 1.00 9.88 C
ATOM 22 N2 G A1216 -52.871 154.284 207.814 1.00 9.88 N
ATOM 23 N3 G A1216 -53.992 154.607 209.768 1.00 9.88 N
ATOM 24 C4 G A1216 -54.303 153.975 210.895 1.00 9.88 C
ATOM 25 P U A1217 -60.371 155.222 211.685 1.00 20.07 P
ATOM 26 OP1 U A1217 -61.537 155.964 211.101 1.00 20.07 O
ATOM 27 OP2 U A1217 -60.520 154.562 213.037 1.00 20.07 O
ATOM 28 O5' U A1217 -59.805 154.161 210.624 1.00 20.07 O
TER
ATOM 1 O3' G B1218 -53.420 151.156 204.935 1.00 7.60 O
ATOM 2 P A B1219 -52.016 151.177 205.642 1.00 0.01 P
ATOM 3 OP1 A B1219 -51.424 149.842 205.454 1.00 0.01 O
ATOM 4 OP2 A B1219 -52.227 151.672 207.003 1.00 0.01 O
ATOM 5 O5' A B1219 -51.221 152.225 204.797 1.00 0.01 O
ATOM 6 C5' A B1219 -50.651 151.851 203.572 1.00 0.01 C
ATOM 7 C4' A B1219 -50.581 153.020 202.663 1.00 0.01 C
ATOM 8 O4' A B1219 -51.827 153.746 202.723 1.00 0.01 O
ATOM 9 C3' A B1219 -49.535 154.043 203.014 1.00 0.01 C
ATOM 10 O3' A B1219 -48.268 153.682 202.517 1.00 0.01 O
ATOM 11 C2' A B1219 -50.089 155.306 202.388 1.00 0.01 C
ATOM 12 O2' A B1219 -49.789 155.346 201.011 1.00 0.01 O
ATOM 13 C1' A B1219 -51.591 155.109 202.537 1.00 0.01 C
ATOM 14 N9 A B1219 -52.139 155.828 203.685 1.00 0.04 N
ATOM 15 C8 A B1219 -52.093 155.482 204.995 1.00 0.04 C
ATOM 16 N7 A B1219 -52.713 156.337 205.769 1.00 0.04 N
ATOM 17 C5 A B1219 -53.201 157.285 204.905 1.00 0.04 C
ATOM 18 C6 A B1219 -53.945 158.432 205.117 1.00 0.04 C
ATOM 19 N6 A B1219 -54.325 158.853 206.331 1.00 0.04 N
ATOM 20 N1 A B1219 -54.272 159.154 204.035 1.00 0.04 N
ATOM 21 C2 A B1219 -53.870 158.740 202.849 1.00 0.04 C
ATOM 22 N3 A B1219 -53.171 157.666 202.523 1.00 0.04 N
ATOM 23 C4 A B1219 -52.863 156.981 203.621 1.00 0.04 C
ATOM 24 P G B1220 -47.048 153.478 203.513 1.00 8.44 P
ATOM 25 OP1 G B1220 -45.816 153.460 202.687 1.00 8.44 O
ATOM 26 OP2 G B1220 -47.362 152.303 204.374 1.00 8.44 O
ATOM 27 O5' G B1220 -47.105 154.811 204.373 1.00 8.44 O
TER
ATOM 2 P G A1216 -57.999 154.992 216.572 1.00 9.57 P
ATOM 3 OP1 G A1216 -59.119 155.838 217.073 1.00 9.57 O
ATOM 4 OP2 G A1216 -58.042 153.508 216.801 1.00 9.57 O
ATOM 5 O5' G A1216 -57.761 155.305 215.029 1.00 9.57 O
ATOM 6 C5' G A1216 -57.679 156.650 214.587 1.00 9.57 C
ATOM 7 C4' G A1216 -57.215 156.755 213.157 1.00 9.57 C
ATOM 8 O4' G A1216 -55.817 156.397 213.047 1.00 9.57 O
ATOM 9 C3' G A1216 -57.887 155.846 212.155 1.00 9.57 C
ATOM 10 O3' G A1216 -59.173 156.281 211.801 1.00 9.57 O
ATOM 11 C2' G A1216 -56.905 155.883 211.006 1.00 9.57 C
ATOM 12 O2' G A1216 -57.011 157.106 210.291 1.00 9.57 O
ATOM 13 C1' G A1216 -55.578 155.881 211.754 1.00 9.57 C
ATOM 14 N9 G A1216 -55.038 154.531 211.874 1.00 9.88 N
ATOM 15 C8 G A1216 -55.161 153.606 212.878 1.00 9.88 C
ATOM 16 N7 G A1216 -54.539 152.489 212.608 1.00 9.88 N
ATOM 17 C5 G A1216 -53.998 152.715 211.348 1.00 9.88 C
ATOM 18 C6 G A1216 -53.217 151.879 210.528 1.00 9.88 C
ATOM 19 O6 G A1216 -52.826 150.724 210.743 1.00 9.88 O
ATOM 20 N1 G A1216 -52.892 152.540 209.351 1.00 9.88 N
ATOM 21 C2 G A1216 -53.269 153.821 209.007 1.00 9.88 C
ATOM 22 N2 G A1216 -52.871 154.284 207.814 1.00 9.88 N
ATOM 23 N3 G A1216 -53.992 154.607 209.768 1.00 9.88 N
ATOM 24 C4 G A1216 -54.303 153.975 210.895 1.00 9.88 C
ATOM 25 P U A1217 -60.371 155.222 211.685 1.00 20.07 P
ATOM 26 OP1 U A1217 -61.537 155.964 211.101 1.00 20.07 O
ATOM 27 OP2 U A1217 -60.520 154.562 213.037 1.00 20.07 O
ATOM 28 O5' U A1217 -59.805 154.161 210.624 1.00 20.07 O
TER
ATOM 1 O3' G B1218 -53.420 151.156 204.935 1.00 7.60 O
ATOM 2 P A B1219 -52.016 151.177 205.642 1.00 0.01 P
ATOM 3 OP1 A B1219 -51.424 149.842 205.454 1.00 0.01 O
ATOM 4 OP2 A B1219 -52.227 151.672 207.003 1.00 0.01 O
ATOM 5 O5' A B1219 -51.221 152.225 204.797 1.00 0.01 O
ATOM 6 C5' A B1219 -50.651 151.851 203.572 1.00 0.01 C
ATOM 7 C4' A B1219 -50.581 153.020 202.663 1.00 0.01 C
ATOM 8 O4' A B1219 -51.827 153.746 202.723 1.00 0.01 O
ATOM 9 C3' A B1219 -49.535 154.043 203.014 1.00 0.01 C
ATOM 10 O3' A B1219 -48.268 153.682 202.517 1.00 0.01 O
ATOM 11 C2' A B1219 -50.089 155.306 202.388 1.00 0.01 C
ATOM 12 O2' A B1219 -49.789 155.346 201.011 1.00 0.01 O
ATOM 13 C1' A B1219 -51.591 155.109 202.537 1.00 0.01 C
ATOM 14 N9 A B1219 -52.139 155.828 203.685 1.00 0.04 N
ATOM 15 C8 A B1219 -52.093 155.482 204.995 1.00 0.04 C
ATOM 16 N7 A B1219 -52.713 156.337 205.769 1.00 0.04 N
ATOM 17 C5 A B1219 -53.201 157.285 204.905 1.00 0.04 C
ATOM 18 C6 A B1219 -53.945 158.432 205.117 1.00 0.04 C
ATOM 19 N6 A B1219 -54.325 158.853 206.331 1.00 0.04 N
ATOM 20 N1 A B1219 -54.272 159.154 204.035 1.00 0.04 N
ATOM 21 C2 A B1219 -53.870 158.740 202.849 1.00 0.04 C
ATOM 22 N3 A B1219 -53.171 157.666 202.523 1.00 0.04 N
ATOM 23 C4 A B1219 -52.863 156.981 203.621 1.00 0.04 C
ATOM 24 P G B1220 -47.048 153.478 203.513 1.00 8.44 P
ATOM 25 OP1 G B1220 -45.816 153.460 202.687 1.00 8.44 O
ATOM 26 OP2 G B1220 -47.362 152.303 204.374 1.00 8.44 O
ATOM 27 O5' G B1220 -47.105 154.811 204.373 1.00 8.44 O
TER
Atoms:
OP1: (-59.119,155.838,217.073)
OP2: (-58.042,153.508,216.801)
C3': (-57.887,155.846,212.155)
C1': (-55.578,155.881,211.754)
C5': (-57.679,156.650,214.587)
O6: (-52.826,150.724,210.743)
O4': (-55.817,156.397,213.047)
C8: (-55.161,153.606,212.878)
C2: (-53.269,153.821,209.007)
C6: (-53.217,151.879,210.528)
C5: (-53.998,152.715,211.348)
C4: (-54.303,153.975,210.895)
P: (-57.999,154.992,216.572)
C4': (-57.215,156.755,213.157)
C2': (-56.905,155.883,211.006)
O2': (-57.011,157.106,210.291)
N1: (-52.892,152.540,209.351)
N2: (-52.871,154.284,207.814)
N3: (-53.992,154.607,209.768)
N7: (-54.539,152.489,212.608)
N9: (-55.038,154.531,211.874)
O5': (-57.761,155.305,215.029)
O3': (-59.173,156.281,211.801)
OP2: (-58.042,153.508,216.801)
C3': (-57.887,155.846,212.155)
C1': (-55.578,155.881,211.754)
C5': (-57.679,156.650,214.587)
O6: (-52.826,150.724,210.743)
O4': (-55.817,156.397,213.047)
C8: (-55.161,153.606,212.878)
C2: (-53.269,153.821,209.007)
C6: (-53.217,151.879,210.528)
C5: (-53.998,152.715,211.348)
C4: (-54.303,153.975,210.895)
P: (-57.999,154.992,216.572)
C4': (-57.215,156.755,213.157)
C2': (-56.905,155.883,211.006)
O2': (-57.011,157.106,210.291)
N1: (-52.892,152.540,209.351)
N2: (-52.871,154.284,207.814)
N3: (-53.992,154.607,209.768)
N7: (-54.539,152.489,212.608)
N9: (-55.038,154.531,211.874)
O5': (-57.761,155.305,215.029)
O3': (-59.173,156.281,211.801)
OP1: (-51.424,149.842,205.454)
OP2: (-52.227,151.672,207.003)
C3': (-49.535,154.043,203.014)
C1': (-51.591,155.109,202.537)
C5': (-50.651,151.851,203.572)
O4': (-51.827,153.746,202.723)
C8: (-52.093,155.482,204.995)
O2': (-49.789,155.346,201.011)
C6: (-53.945,158.432,205.117)
C5: (-53.201,157.285,204.905)
C4: (-52.863,156.981,203.621)
P: (-52.016,151.177,205.642)
C4': (-50.581,153.020,202.663)
C2': (-50.089,155.306,202.388)
C2: (-53.870,158.740,202.849)
N1: (-54.272,159.154,204.035)
N3: (-53.171,157.666,202.523)
N6: (-54.325,158.853,206.331)
N7: (-52.713,156.337,205.769)
N9: (-52.139,155.828,203.685)
O5': (-51.221,152.225,204.797)
O3': (-48.268,153.682,202.517)
OP2: (-52.227,151.672,207.003)
C3': (-49.535,154.043,203.014)
C1': (-51.591,155.109,202.537)
C5': (-50.651,151.851,203.572)
O4': (-51.827,153.746,202.723)
C8: (-52.093,155.482,204.995)
O2': (-49.789,155.346,201.011)
C6: (-53.945,158.432,205.117)
C5: (-53.201,157.285,204.905)
C4: (-52.863,156.981,203.621)
P: (-52.016,151.177,205.642)
C4': (-50.581,153.020,202.663)
C2': (-50.089,155.306,202.388)
C2: (-53.870,158.740,202.849)
N1: (-54.272,159.154,204.035)
N3: (-53.171,157.666,202.523)
N6: (-54.325,158.853,206.331)
N7: (-52.713,156.337,205.769)
N9: (-52.139,155.828,203.685)
O5': (-51.221,152.225,204.797)
O3': (-48.268,153.682,202.517)
Image (generated by PyMOL):