Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1286:A1289
Extra
PDB:
ATOM 1 O3' U A1285 7.974 113.520 75.817 1.00 41.17 O
ATOM 2 P G A1286 8.589 112.467 76.847 1.00 43.28 P
ATOM 3 OP1 G A1286 7.743 111.270 76.655 1.00 43.40 O
ATOM 4 OP2 G A1286 8.707 113.091 78.180 1.00 43.80 O
ATOM 5 O5' G A1286 10.043 112.144 76.301 1.00 41.74 O
ATOM 6 C5' G A1286 10.210 111.268 75.182 1.00 40.95 C
ATOM 7 C4' G A1286 11.658 111.207 74.774 1.00 41.10 C
ATOM 8 O4' G A1286 12.124 112.537 74.438 1.00 40.14 O
ATOM 9 C3' G A1286 12.646 110.818 75.854 1.00 39.89 C
ATOM 10 O3' G A1286 12.585 109.435 76.159 1.00 38.10 O
ATOM 11 C2' G A1286 13.955 111.241 75.207 1.00 38.73 C
ATOM 12 O2' G A1286 14.356 110.351 74.184 1.00 38.88 O
ATOM 13 C1' G A1286 13.533 112.571 74.579 1.00 38.84 C
ATOM 14 N9 G A1286 13.872 113.690 75.438 1.00 37.52 N
ATOM 15 C8 G A1286 13.085 114.303 76.375 1.00 38.42 C
ATOM 16 N7 G A1286 13.695 115.273 76.992 1.00 39.13 N
ATOM 17 C5 G A1286 14.955 115.300 76.418 1.00 38.92 C
ATOM 18 C6 G A1286 16.068 116.137 76.680 1.00 39.11 C
ATOM 19 O6 G A1286 16.150 117.085 77.477 1.00 41.03 O
ATOM 20 N1 G A1286 17.167 115.790 75.895 1.00 37.03 N
ATOM 21 C2 G A1286 17.183 114.780 74.972 1.00 37.50 C
ATOM 22 N2 G A1286 18.339 114.585 74.326 1.00 39.14 N
ATOM 23 N3 G A1286 16.140 114.011 74.704 1.00 38.30 N
ATOM 24 C4 G A1286 15.073 114.323 75.463 1.00 37.85 C
ATOM 25 P A A1287 12.405 108.986 77.689 1.00 38.06 P
ATOM 26 OP1 A A1287 12.262 107.512 77.790 1.00 35.00 O
ATOM 27 OP2 A A1287 11.363 109.872 78.267 1.00 37.34 O
ATOM 28 O5' A A1287 13.776 109.402 78.376 1.00 37.92 O
TER
ATOM 1 O3' A B1288 21.168 114.487 77.402 1.00 33.94 O
ATOM 2 P A B1289 21.229 115.786 76.441 1.00 32.83 P
ATOM 3 OP1 A B1289 22.043 116.814 77.132 1.00 31.27 O
ATOM 4 OP2 A B1289 19.855 116.115 76.036 1.00 34.06 O
ATOM 5 O5' A B1289 22.072 115.309 75.181 1.00 30.02 O
ATOM 6 C5' A B1289 23.494 115.479 75.149 1.00 31.15 C
ATOM 7 C4' A B1289 24.071 114.747 73.977 1.00 32.36 C
ATOM 8 O4' A B1289 23.508 113.418 73.957 1.00 31.83 O
ATOM 9 C3' A B1289 23.741 115.304 72.604 1.00 32.13 C
ATOM 10 O3' A B1289 24.661 116.298 72.205 1.00 30.25 O
ATOM 11 C2' A B1289 23.946 114.095 71.725 1.00 33.54 C
ATOM 12 O2' A B1289 25.322 113.889 71.487 1.00 35.00 O
ATOM 13 C1' A B1289 23.397 112.982 72.616 1.00 33.55 C
ATOM 14 N9 A B1289 21.996 112.683 72.330 1.00 34.03 N
ATOM 15 C8 A B1289 20.897 113.451 72.599 1.00 34.26 C
ATOM 16 N7 A B1289 19.770 112.906 72.224 1.00 34.68 N
ATOM 17 C5 A B1289 20.153 111.694 71.670 1.00 34.76 C
ATOM 18 C6 A B1289 19.414 110.639 71.092 1.00 34.81 C
ATOM 19 N6 A B1289 18.083 110.634 70.976 1.00 36.65 N
ATOM 20 N1 A B1289 20.096 109.577 70.636 1.00 34.16 N
ATOM 21 C2 A B1289 21.422 109.582 70.749 1.00 34.03 C
ATOM 22 N3 A B1289 22.226 110.507 71.267 1.00 34.25 N
ATOM 23 C4 A B1289 21.519 111.549 71.721 1.00 33.91 C
ATOM 24 P A B1290 24.269 117.829 72.355 1.00 34.66 P
ATOM 25 OP1 A B1290 25.385 118.639 71.842 1.00 34.56 O
ATOM 26 OP2 A B1290 23.808 117.997 73.741 1.00 34.71 O
ATOM 27 O5' A B1290 22.995 118.058 71.424 1.00 37.54 O
TER
ATOM 2 P G A1286 8.589 112.467 76.847 1.00 43.28 P
ATOM 3 OP1 G A1286 7.743 111.270 76.655 1.00 43.40 O
ATOM 4 OP2 G A1286 8.707 113.091 78.180 1.00 43.80 O
ATOM 5 O5' G A1286 10.043 112.144 76.301 1.00 41.74 O
ATOM 6 C5' G A1286 10.210 111.268 75.182 1.00 40.95 C
ATOM 7 C4' G A1286 11.658 111.207 74.774 1.00 41.10 C
ATOM 8 O4' G A1286 12.124 112.537 74.438 1.00 40.14 O
ATOM 9 C3' G A1286 12.646 110.818 75.854 1.00 39.89 C
ATOM 10 O3' G A1286 12.585 109.435 76.159 1.00 38.10 O
ATOM 11 C2' G A1286 13.955 111.241 75.207 1.00 38.73 C
ATOM 12 O2' G A1286 14.356 110.351 74.184 1.00 38.88 O
ATOM 13 C1' G A1286 13.533 112.571 74.579 1.00 38.84 C
ATOM 14 N9 G A1286 13.872 113.690 75.438 1.00 37.52 N
ATOM 15 C8 G A1286 13.085 114.303 76.375 1.00 38.42 C
ATOM 16 N7 G A1286 13.695 115.273 76.992 1.00 39.13 N
ATOM 17 C5 G A1286 14.955 115.300 76.418 1.00 38.92 C
ATOM 18 C6 G A1286 16.068 116.137 76.680 1.00 39.11 C
ATOM 19 O6 G A1286 16.150 117.085 77.477 1.00 41.03 O
ATOM 20 N1 G A1286 17.167 115.790 75.895 1.00 37.03 N
ATOM 21 C2 G A1286 17.183 114.780 74.972 1.00 37.50 C
ATOM 22 N2 G A1286 18.339 114.585 74.326 1.00 39.14 N
ATOM 23 N3 G A1286 16.140 114.011 74.704 1.00 38.30 N
ATOM 24 C4 G A1286 15.073 114.323 75.463 1.00 37.85 C
ATOM 25 P A A1287 12.405 108.986 77.689 1.00 38.06 P
ATOM 26 OP1 A A1287 12.262 107.512 77.790 1.00 35.00 O
ATOM 27 OP2 A A1287 11.363 109.872 78.267 1.00 37.34 O
ATOM 28 O5' A A1287 13.776 109.402 78.376 1.00 37.92 O
TER
ATOM 1 O3' A B1288 21.168 114.487 77.402 1.00 33.94 O
ATOM 2 P A B1289 21.229 115.786 76.441 1.00 32.83 P
ATOM 3 OP1 A B1289 22.043 116.814 77.132 1.00 31.27 O
ATOM 4 OP2 A B1289 19.855 116.115 76.036 1.00 34.06 O
ATOM 5 O5' A B1289 22.072 115.309 75.181 1.00 30.02 O
ATOM 6 C5' A B1289 23.494 115.479 75.149 1.00 31.15 C
ATOM 7 C4' A B1289 24.071 114.747 73.977 1.00 32.36 C
ATOM 8 O4' A B1289 23.508 113.418 73.957 1.00 31.83 O
ATOM 9 C3' A B1289 23.741 115.304 72.604 1.00 32.13 C
ATOM 10 O3' A B1289 24.661 116.298 72.205 1.00 30.25 O
ATOM 11 C2' A B1289 23.946 114.095 71.725 1.00 33.54 C
ATOM 12 O2' A B1289 25.322 113.889 71.487 1.00 35.00 O
ATOM 13 C1' A B1289 23.397 112.982 72.616 1.00 33.55 C
ATOM 14 N9 A B1289 21.996 112.683 72.330 1.00 34.03 N
ATOM 15 C8 A B1289 20.897 113.451 72.599 1.00 34.26 C
ATOM 16 N7 A B1289 19.770 112.906 72.224 1.00 34.68 N
ATOM 17 C5 A B1289 20.153 111.694 71.670 1.00 34.76 C
ATOM 18 C6 A B1289 19.414 110.639 71.092 1.00 34.81 C
ATOM 19 N6 A B1289 18.083 110.634 70.976 1.00 36.65 N
ATOM 20 N1 A B1289 20.096 109.577 70.636 1.00 34.16 N
ATOM 21 C2 A B1289 21.422 109.582 70.749 1.00 34.03 C
ATOM 22 N3 A B1289 22.226 110.507 71.267 1.00 34.25 N
ATOM 23 C4 A B1289 21.519 111.549 71.721 1.00 33.91 C
ATOM 24 P A B1290 24.269 117.829 72.355 1.00 34.66 P
ATOM 25 OP1 A B1290 25.385 118.639 71.842 1.00 34.56 O
ATOM 26 OP2 A B1290 23.808 117.997 73.741 1.00 34.71 O
ATOM 27 O5' A B1290 22.995 118.058 71.424 1.00 37.54 O
TER
Atoms:
OP1: (7.743,111.270,76.655)
OP2: (8.707,113.091,78.180)
C3': (12.646,110.818,75.854)
C1': (13.533,112.571,74.579)
C5': (10.210,111.268,75.182)
O6: (16.150,117.085,77.477)
O4': (12.124,112.537,74.438)
C8: (13.085,114.303,76.375)
C2: (17.183,114.780,74.972)
C6: (16.068,116.137,76.680)
C5: (14.955,115.300,76.418)
C4: (15.073,114.323,75.463)
P: (8.589,112.467,76.847)
C4': (11.658,111.207,74.774)
C2': (13.955,111.241,75.207)
O2': (14.356,110.351,74.184)
N1: (17.167,115.790,75.895)
N2: (18.339,114.585,74.326)
N3: (16.140,114.011,74.704)
N7: (13.695,115.273,76.992)
N9: (13.872,113.690,75.438)
O5': (10.043,112.144,76.301)
O3': (12.585,109.435,76.159)
OP2: (8.707,113.091,78.180)
C3': (12.646,110.818,75.854)
C1': (13.533,112.571,74.579)
C5': (10.210,111.268,75.182)
O6: (16.150,117.085,77.477)
O4': (12.124,112.537,74.438)
C8: (13.085,114.303,76.375)
C2: (17.183,114.780,74.972)
C6: (16.068,116.137,76.680)
C5: (14.955,115.300,76.418)
C4: (15.073,114.323,75.463)
P: (8.589,112.467,76.847)
C4': (11.658,111.207,74.774)
C2': (13.955,111.241,75.207)
O2': (14.356,110.351,74.184)
N1: (17.167,115.790,75.895)
N2: (18.339,114.585,74.326)
N3: (16.140,114.011,74.704)
N7: (13.695,115.273,76.992)
N9: (13.872,113.690,75.438)
O5': (10.043,112.144,76.301)
O3': (12.585,109.435,76.159)
OP1: (22.043,116.814,77.132)
OP2: (19.855,116.115,76.036)
C3': (23.741,115.304,72.604)
C1': (23.397,112.982,72.616)
C5': (23.494,115.479,75.149)
O4': (23.508,113.418,73.957)
C8: (20.897,113.451,72.599)
O2': (25.322,113.889,71.487)
C6: (19.414,110.639,71.092)
C5: (20.153,111.694,71.670)
C4: (21.519,111.549,71.721)
P: (21.229,115.786,76.441)
C4': (24.071,114.747,73.977)
C2': (23.946,114.095,71.725)
C2: (21.422,109.582,70.749)
N1: (20.096,109.577,70.636)
N3: (22.226,110.507,71.267)
N6: (18.083,110.634,70.976)
N7: (19.770,112.906,72.224)
N9: (21.996,112.683,72.330)
O5': (22.072,115.309,75.181)
O3': (24.661,116.298,72.205)
OP2: (19.855,116.115,76.036)
C3': (23.741,115.304,72.604)
C1': (23.397,112.982,72.616)
C5': (23.494,115.479,75.149)
O4': (23.508,113.418,73.957)
C8: (20.897,113.451,72.599)
O2': (25.322,113.889,71.487)
C6: (19.414,110.639,71.092)
C5: (20.153,111.694,71.670)
C4: (21.519,111.549,71.721)
P: (21.229,115.786,76.441)
C4': (24.071,114.747,73.977)
C2': (23.946,114.095,71.725)
C2: (21.422,109.582,70.749)
N1: (20.096,109.577,70.636)
N3: (22.226,110.507,71.267)
N6: (18.083,110.634,70.976)
N7: (19.770,112.906,72.224)
N9: (21.996,112.683,72.330)
O5': (22.072,115.309,75.181)
O3': (24.661,116.298,72.205)
Image (generated by PyMOL):