ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YHQ:989:992

Extra

PDB:
ATOM 1 O3' C A 88 38.412 89.981 127.005 1.00 38.06 O
ATOM 2 P G A 89 39.330 91.296 126.905 1.00 39.93 P
ATOM 3 OP1 G A 89 39.318 91.968 128.229 1.00 41.67 O
ATOM 4 OP2 G A 89 38.916 92.055 125.700 1.00 42.46 O
ATOM 5 O5' G A 89 40.799 90.730 126.656 1.00 40.36 O
ATOM 6 C5' G A 89 41.501 90.021 127.691 1.00 38.73 C
ATOM 7 C4' G A 89 42.887 89.642 127.228 1.00 39.67 C
ATOM 8 O4' G A 89 42.808 88.719 126.112 1.00 38.92 O
ATOM 9 C3' G A 89 43.742 90.763 126.671 1.00 39.58 C
ATOM 10 O3' G A 89 44.298 91.565 127.698 1.00 40.41 O
ATOM 11 C2' G A 89 44.811 89.988 125.918 1.00 39.97 C
ATOM 12 O2' G A 89 45.837 89.493 126.756 1.00 41.41 O
ATOM 13 C1' G A 89 43.990 88.830 125.337 1.00 40.91 C
ATOM 14 N9 G A 89 43.637 89.081 123.941 1.00 43.61 N
ATOM 15 C8 G A 89 42.451 89.561 123.436 1.00 42.74 C
ATOM 16 N7 G A 89 42.492 89.768 122.147 1.00 44.00 N
ATOM 17 C5 G A 89 43.776 89.385 121.778 1.00 44.42 C
ATOM 18 C6 G A 89 44.424 89.419 120.512 1.00 46.53 C
ATOM 19 O6 G A 89 43.986 89.836 119.427 1.00 48.27 O
ATOM 20 N1 G A 89 45.723 88.920 120.590 1.00 44.97 N
ATOM 21 C2 G A 89 46.329 88.473 121.737 1.00 44.06 C
ATOM 22 N2 G A 89 47.589 88.032 121.618 1.00 43.13 N
ATOM 23 N3 G A 89 45.745 88.458 122.919 1.00 43.68 N
ATOM 24 C4 G A 89 44.480 88.927 122.867 1.00 43.45 C
ATOM 25 P C A 90 44.187 93.164 127.603 1.00 45.65 P
ATOM 26 OP1 C A 90 44.771 93.738 128.848 1.00 45.30 O
ATOM 27 OP2 C A 90 42.790 93.506 127.221 1.00 43.23 O
ATOM 28 O5' C A 90 45.147 93.541 126.386 1.00 43.95 O
TER

ATOM 1 O3' G B 91 50.040 90.702 119.414 1.00 42.08 O
ATOM 2 P A B 92 49.623 89.350 118.648 1.00 42.98 P
ATOM 3 OP1 A B 92 49.831 89.605 117.202 1.00 45.47 O
ATOM 4 OP2 A B 92 48.288 88.924 119.121 1.00 44.74 O
ATOM 5 O5' A B 92 50.695 88.270 119.124 1.00 42.48 O
ATOM 6 C5' A B 92 51.947 88.115 118.430 1.00 44.26 C
ATOM 7 C4' A B 92 52.806 87.073 119.109 1.00 47.68 C
ATOM 8 O4' A B 92 53.031 87.476 120.486 1.00 48.93 O
ATOM 9 C3' A B 92 52.235 85.667 119.235 1.00 48.94 C
ATOM 10 O3' A B 92 52.445 84.884 118.070 1.00 50.72 O
ATOM 11 C2' A B 92 53.062 85.111 120.383 1.00 49.80 C
ATOM 12 O2' A B 92 54.375 84.768 119.977 1.00 51.80 O
ATOM 13 C1' A B 92 53.127 86.324 121.310 1.00 49.33 C
ATOM 14 N9 A B 92 52.001 86.327 122.244 1.00 50.10 N
ATOM 15 C8 A B 92 50.841 87.064 122.175 1.00 49.55 C
ATOM 16 N7 A B 92 49.993 86.806 123.136 1.00 49.46 N
ATOM 17 C5 A B 92 50.638 85.843 123.899 1.00 49.97 C
ATOM 18 C6 A B 92 50.259 85.149 125.058 1.00 49.08 C
ATOM 19 N6 A B 92 49.084 85.320 125.667 1.00 48.86 N
ATOM 20 N1 A B 92 51.135 84.258 125.574 1.00 49.74 N
ATOM 21 C2 A B 92 52.311 84.080 124.953 1.00 50.42 C
ATOM 22 N3 A B 92 52.780 84.669 123.854 1.00 50.93 N
ATOM 23 C4 A B 92 51.883 85.550 123.370 1.00 50.26 C
ATOM 24 P G B 93 51.190 84.267 117.272 1.00 52.75 P
ATOM 25 OP1 G B 93 51.738 83.260 116.324 1.00 53.32 O
ATOM 26 OP2 G B 93 50.385 85.408 116.755 1.00 52.45 O
ATOM 27 O5' G B 93 50.281 83.513 118.348 1.00 53.14 O
TER

Atoms:
OP1: (39.318,91.968,128.229)
OP2: (38.916,92.055,125.700)
C3': (43.742,90.763,126.671)
C1': (43.990,88.830,125.337)
C5': (41.501,90.021,127.691)
O6: (43.986,89.836,119.427)
O4': (42.808,88.719,126.112)
C8: (42.451,89.561,123.436)
C2: (46.329,88.473,121.737)
C6: (44.424,89.419,120.512)
C5: (43.776,89.385,121.778)
C4: (44.480,88.927,122.867)
P: (39.330,91.296,126.905)
C4': (42.887,89.642,127.228)
C2': (44.811,89.988,125.918)
O2': (45.837,89.493,126.756)
N1: (45.723,88.920,120.590)
N2: (47.589,88.032,121.618)
N3: (45.745,88.458,122.919)
N7: (42.492,89.768,122.147)
N9: (43.637,89.081,123.941)
O5': (40.799,90.730,126.656)
O3': (44.298,91.565,127.698)
OP1: (49.831,89.605,117.202)
OP2: (48.288,88.924,119.121)
C3': (52.235,85.667,119.235)
C1': (53.127,86.324,121.310)
C5': (51.947,88.115,118.430)
O4': (53.031,87.476,120.486)
C8: (50.841,87.064,122.175)
O2': (54.375,84.768,119.977)
C6: (50.259,85.149,125.058)
C5: (50.638,85.843,123.899)
C4: (51.883,85.550,123.370)
P: (49.623,89.350,118.648)
C4': (52.806,87.073,119.109)
C2': (53.062,85.111,120.383)
C2: (52.311,84.080,124.953)
N1: (51.135,84.258,125.574)
N3: (52.780,84.669,123.854)
N6: (49.084,85.320,125.667)
N7: (49.993,86.806,123.136)
N9: (52.001,86.327,122.244)
O5': (50.695,88.270,119.124)
O3': (52.445,84.884,118.070)
Image (generated by PyMOL):
PyMOL image
show in jmol