Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2587:A2590
Extra
PDB:
ATOM 1 O3' C A2586 -47.413 131.741 129.760 1.00 0.01 O
ATOM 2 P G A2587 -46.866 132.564 128.510 1.00 4.95 P
ATOM 3 OP1 G A2587 -48.038 133.171 127.866 1.00 4.95 O
ATOM 4 OP2 G A2587 -46.004 131.657 127.717 1.00 4.95 O
ATOM 5 O5' G A2587 -45.997 133.678 129.208 1.00 4.95 O
ATOM 6 C5' G A2587 -46.638 134.553 130.103 1.00 4.95 C
ATOM 7 C4' G A2587 -45.682 135.351 130.919 1.00 4.95 C
ATOM 8 O4' G A2587 -44.880 134.486 131.731 1.00 4.95 O
ATOM 9 C3' G A2587 -44.655 136.151 130.178 1.00 4.95 C
ATOM 10 O3' G A2587 -45.183 137.286 129.531 1.00 4.95 O
ATOM 11 C2' G A2587 -43.683 136.478 131.288 1.00 4.95 C
ATOM 12 O2' G A2587 -44.196 137.516 132.114 1.00 4.95 O
ATOM 13 C1' G A2587 -43.702 135.170 132.083 1.00 4.95 C
ATOM 14 N9 G A2587 -42.560 134.337 131.752 1.00 5.30 N
ATOM 15 C8 G A2587 -42.485 133.412 130.757 1.00 5.30 C
ATOM 16 N7 G A2587 -41.299 132.868 130.698 1.00 5.30 N
ATOM 17 C5 G A2587 -40.589 133.494 131.697 1.00 5.30 C
ATOM 18 C6 G A2587 -39.264 133.304 132.079 1.00 5.30 C
ATOM 19 O6 G A2587 -38.469 132.527 131.573 1.00 5.30 O
ATOM 20 N1 G A2587 -38.915 134.129 133.154 1.00 5.30 N
ATOM 21 C2 G A2587 -39.767 135.034 133.767 1.00 5.30 C
ATOM 22 N2 G A2587 -39.248 135.746 134.778 1.00 5.30 N
ATOM 23 N3 G A2587 -41.037 135.220 133.404 1.00 5.30 N
ATOM 24 C4 G A2587 -41.354 134.411 132.368 1.00 5.30 C
ATOM 25 P U A2588 -44.553 137.725 128.124 1.00 0.01 P
ATOM 26 OP1 U A2588 -44.882 139.154 127.912 1.00 0.01 O
ATOM 27 OP2 U A2588 -44.996 136.717 127.098 1.00 0.01 O
ATOM 28 O5' U A2588 -42.995 137.558 128.397 1.00 0.01 O
TER
ATOM 1 O3' G B2589 -35.393 137.428 133.137 1.00 0.01 O
ATOM 2 P A B2590 -35.285 136.332 134.299 1.00 0.01 P
ATOM 3 OP1 A B2590 -33.919 135.763 134.263 1.00 0.01 O
ATOM 4 OP2 A B2590 -36.440 135.431 134.120 1.00 0.01 O
ATOM 5 O5' A B2590 -35.478 137.192 135.616 1.00 0.01 O
ATOM 6 C5' A B2590 -34.394 137.894 136.189 1.00 0.01 C
ATOM 7 C4' A B2590 -34.819 138.664 137.418 1.00 0.01 C
ATOM 8 O4' A B2590 -35.943 139.514 137.102 1.00 0.01 O
ATOM 9 C3' A B2590 -35.280 137.828 138.600 1.00 0.01 C
ATOM 10 O3' A B2590 -34.213 137.444 139.411 1.00 0.01 O
ATOM 11 C2' A B2590 -36.251 138.740 139.315 1.00 0.01 C
ATOM 12 O2' A B2590 -35.559 139.646 140.151 1.00 0.01 O
ATOM 13 C1' A B2590 -36.860 139.524 138.165 1.00 0.01 C
ATOM 14 N9 A B2590 -38.112 138.935 137.685 1.00 0.01 N
ATOM 15 C8 A B2590 -38.267 137.818 136.934 1.00 0.01 C
ATOM 16 N7 A B2590 -39.511 137.594 136.642 1.00 0.01 N
ATOM 17 C5 A B2590 -40.212 138.644 137.210 1.00 0.01 C
ATOM 18 C6 A B2590 -41.575 138.993 137.240 1.00 0.01 C
ATOM 19 N6 A B2590 -42.570 138.307 136.682 1.00 0.01 N
ATOM 20 N1 A B2590 -41.903 140.101 137.903 1.00 0.01 N
ATOM 21 C2 A B2590 -40.923 140.798 138.482 1.00 0.01 C
ATOM 22 N3 A B2590 -39.623 140.573 138.512 1.00 0.01 N
ATOM 23 C4 A B2590 -39.340 139.470 137.853 1.00 0.01 C
ATOM 24 P G B2591 -33.972 135.918 139.756 1.00 0.01 P
ATOM 25 OP1 G B2591 -32.643 135.842 140.404 1.00 0.01 O
ATOM 26 OP2 G B2591 -34.205 135.137 138.527 1.00 0.01 O
ATOM 27 O5' G B2591 -35.123 135.633 140.813 1.00 0.01 O
TER
ATOM 2 P G A2587 -46.866 132.564 128.510 1.00 4.95 P
ATOM 3 OP1 G A2587 -48.038 133.171 127.866 1.00 4.95 O
ATOM 4 OP2 G A2587 -46.004 131.657 127.717 1.00 4.95 O
ATOM 5 O5' G A2587 -45.997 133.678 129.208 1.00 4.95 O
ATOM 6 C5' G A2587 -46.638 134.553 130.103 1.00 4.95 C
ATOM 7 C4' G A2587 -45.682 135.351 130.919 1.00 4.95 C
ATOM 8 O4' G A2587 -44.880 134.486 131.731 1.00 4.95 O
ATOM 9 C3' G A2587 -44.655 136.151 130.178 1.00 4.95 C
ATOM 10 O3' G A2587 -45.183 137.286 129.531 1.00 4.95 O
ATOM 11 C2' G A2587 -43.683 136.478 131.288 1.00 4.95 C
ATOM 12 O2' G A2587 -44.196 137.516 132.114 1.00 4.95 O
ATOM 13 C1' G A2587 -43.702 135.170 132.083 1.00 4.95 C
ATOM 14 N9 G A2587 -42.560 134.337 131.752 1.00 5.30 N
ATOM 15 C8 G A2587 -42.485 133.412 130.757 1.00 5.30 C
ATOM 16 N7 G A2587 -41.299 132.868 130.698 1.00 5.30 N
ATOM 17 C5 G A2587 -40.589 133.494 131.697 1.00 5.30 C
ATOM 18 C6 G A2587 -39.264 133.304 132.079 1.00 5.30 C
ATOM 19 O6 G A2587 -38.469 132.527 131.573 1.00 5.30 O
ATOM 20 N1 G A2587 -38.915 134.129 133.154 1.00 5.30 N
ATOM 21 C2 G A2587 -39.767 135.034 133.767 1.00 5.30 C
ATOM 22 N2 G A2587 -39.248 135.746 134.778 1.00 5.30 N
ATOM 23 N3 G A2587 -41.037 135.220 133.404 1.00 5.30 N
ATOM 24 C4 G A2587 -41.354 134.411 132.368 1.00 5.30 C
ATOM 25 P U A2588 -44.553 137.725 128.124 1.00 0.01 P
ATOM 26 OP1 U A2588 -44.882 139.154 127.912 1.00 0.01 O
ATOM 27 OP2 U A2588 -44.996 136.717 127.098 1.00 0.01 O
ATOM 28 O5' U A2588 -42.995 137.558 128.397 1.00 0.01 O
TER
ATOM 1 O3' G B2589 -35.393 137.428 133.137 1.00 0.01 O
ATOM 2 P A B2590 -35.285 136.332 134.299 1.00 0.01 P
ATOM 3 OP1 A B2590 -33.919 135.763 134.263 1.00 0.01 O
ATOM 4 OP2 A B2590 -36.440 135.431 134.120 1.00 0.01 O
ATOM 5 O5' A B2590 -35.478 137.192 135.616 1.00 0.01 O
ATOM 6 C5' A B2590 -34.394 137.894 136.189 1.00 0.01 C
ATOM 7 C4' A B2590 -34.819 138.664 137.418 1.00 0.01 C
ATOM 8 O4' A B2590 -35.943 139.514 137.102 1.00 0.01 O
ATOM 9 C3' A B2590 -35.280 137.828 138.600 1.00 0.01 C
ATOM 10 O3' A B2590 -34.213 137.444 139.411 1.00 0.01 O
ATOM 11 C2' A B2590 -36.251 138.740 139.315 1.00 0.01 C
ATOM 12 O2' A B2590 -35.559 139.646 140.151 1.00 0.01 O
ATOM 13 C1' A B2590 -36.860 139.524 138.165 1.00 0.01 C
ATOM 14 N9 A B2590 -38.112 138.935 137.685 1.00 0.01 N
ATOM 15 C8 A B2590 -38.267 137.818 136.934 1.00 0.01 C
ATOM 16 N7 A B2590 -39.511 137.594 136.642 1.00 0.01 N
ATOM 17 C5 A B2590 -40.212 138.644 137.210 1.00 0.01 C
ATOM 18 C6 A B2590 -41.575 138.993 137.240 1.00 0.01 C
ATOM 19 N6 A B2590 -42.570 138.307 136.682 1.00 0.01 N
ATOM 20 N1 A B2590 -41.903 140.101 137.903 1.00 0.01 N
ATOM 21 C2 A B2590 -40.923 140.798 138.482 1.00 0.01 C
ATOM 22 N3 A B2590 -39.623 140.573 138.512 1.00 0.01 N
ATOM 23 C4 A B2590 -39.340 139.470 137.853 1.00 0.01 C
ATOM 24 P G B2591 -33.972 135.918 139.756 1.00 0.01 P
ATOM 25 OP1 G B2591 -32.643 135.842 140.404 1.00 0.01 O
ATOM 26 OP2 G B2591 -34.205 135.137 138.527 1.00 0.01 O
ATOM 27 O5' G B2591 -35.123 135.633 140.813 1.00 0.01 O
TER
Atoms:
OP1: (-48.038,133.171,127.866)
OP2: (-46.004,131.657,127.717)
C3': (-44.655,136.151,130.178)
C1': (-43.702,135.170,132.083)
C5': (-46.638,134.553,130.103)
O6: (-38.469,132.527,131.573)
O4': (-44.880,134.486,131.731)
C8: (-42.485,133.412,130.757)
C2: (-39.767,135.034,133.767)
C6: (-39.264,133.304,132.079)
C5: (-40.589,133.494,131.697)
C4: (-41.354,134.411,132.368)
P: (-46.866,132.564,128.510)
C4': (-45.682,135.351,130.919)
C2': (-43.683,136.478,131.288)
O2': (-44.196,137.516,132.114)
N1: (-38.915,134.129,133.154)
N2: (-39.248,135.746,134.778)
N3: (-41.037,135.220,133.404)
N7: (-41.299,132.868,130.698)
N9: (-42.560,134.337,131.752)
O5': (-45.997,133.678,129.208)
O3': (-45.183,137.286,129.531)
OP2: (-46.004,131.657,127.717)
C3': (-44.655,136.151,130.178)
C1': (-43.702,135.170,132.083)
C5': (-46.638,134.553,130.103)
O6: (-38.469,132.527,131.573)
O4': (-44.880,134.486,131.731)
C8: (-42.485,133.412,130.757)
C2: (-39.767,135.034,133.767)
C6: (-39.264,133.304,132.079)
C5: (-40.589,133.494,131.697)
C4: (-41.354,134.411,132.368)
P: (-46.866,132.564,128.510)
C4': (-45.682,135.351,130.919)
C2': (-43.683,136.478,131.288)
O2': (-44.196,137.516,132.114)
N1: (-38.915,134.129,133.154)
N2: (-39.248,135.746,134.778)
N3: (-41.037,135.220,133.404)
N7: (-41.299,132.868,130.698)
N9: (-42.560,134.337,131.752)
O5': (-45.997,133.678,129.208)
O3': (-45.183,137.286,129.531)
OP1: (-33.919,135.763,134.263)
OP2: (-36.440,135.431,134.120)
C3': (-35.280,137.828,138.600)
C1': (-36.860,139.524,138.165)
C5': (-34.394,137.894,136.189)
O4': (-35.943,139.514,137.102)
C8: (-38.267,137.818,136.934)
O2': (-35.559,139.646,140.151)
C6: (-41.575,138.993,137.240)
C5: (-40.212,138.644,137.210)
C4: (-39.340,139.470,137.853)
P: (-35.285,136.332,134.299)
C4': (-34.819,138.664,137.418)
C2': (-36.251,138.740,139.315)
C2: (-40.923,140.798,138.482)
N1: (-41.903,140.101,137.903)
N3: (-39.623,140.573,138.512)
N6: (-42.570,138.307,136.682)
N7: (-39.511,137.594,136.642)
N9: (-38.112,138.935,137.685)
O5': (-35.478,137.192,135.616)
O3': (-34.213,137.444,139.411)
OP2: (-36.440,135.431,134.120)
C3': (-35.280,137.828,138.600)
C1': (-36.860,139.524,138.165)
C5': (-34.394,137.894,136.189)
O4': (-35.943,139.514,137.102)
C8: (-38.267,137.818,136.934)
O2': (-35.559,139.646,140.151)
C6: (-41.575,138.993,137.240)
C5: (-40.212,138.644,137.210)
C4: (-39.340,139.470,137.853)
P: (-35.285,136.332,134.299)
C4': (-34.819,138.664,137.418)
C2': (-36.251,138.740,139.315)
C2: (-40.923,140.798,138.482)
N1: (-41.903,140.101,137.903)
N3: (-39.623,140.573,138.512)
N6: (-42.570,138.307,136.682)
N7: (-39.511,137.594,136.642)
N9: (-38.112,138.935,137.685)
O5': (-35.478,137.192,135.616)
O3': (-34.213,137.444,139.411)
Image (generated by PyMOL):