Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A224:A418
Extra
PDB:
ATOM 1 O3' U A 223 -80.513 -50.375 79.533 1.00 0.23 O
ATOM 2 P C A 224 -82.090 -50.270 79.321 1.00 0.01 P
ATOM 3 OP1 C A 224 -82.330 -49.523 78.052 1.00 0.01 O
ATOM 4 OP2 C A 224 -82.656 -49.737 80.598 1.00 0.01 O
ATOM 5 O5' C A 224 -82.510 -51.779 79.152 1.00 0.01 O
ATOM 6 C5' C A 224 -83.773 -52.208 79.573 1.00 0.01 C
ATOM 7 C4' C A 224 -83.716 -53.602 80.077 1.00 0.01 C
ATOM 8 O4' C A 224 -82.914 -53.658 81.274 1.00 0.01 O
ATOM 9 C3' C A 224 -85.027 -54.173 80.502 1.00 0.01 C
ATOM 10 O3' C A 224 -85.795 -54.588 79.415 1.00 0.01 O
ATOM 11 C2' C A 224 -84.612 -55.291 81.452 1.00 0.01 C
ATOM 12 O2' C A 224 -84.146 -56.432 80.750 1.00 0.01 O
ATOM 13 C1' C A 224 -83.430 -54.648 82.148 1.00 0.01 C
ATOM 14 N1 C A 224 -83.831 -54.009 83.410 1.00 0.01 N
ATOM 15 C2 C A 224 -84.213 -54.862 84.427 1.00 0.01 C
ATOM 16 O2 C A 224 -84.176 -56.061 84.172 1.00 0.01 O
ATOM 17 N3 C A 224 -84.603 -54.328 85.613 1.00 0.01 N
ATOM 18 C4 C A 224 -84.616 -52.995 85.784 1.00 0.01 C
ATOM 19 N4 C A 224 -84.989 -52.491 86.962 1.00 0.01 N
ATOM 20 C5 C A 224 -84.236 -52.106 84.749 1.00 0.01 C
ATOM 21 C6 C A 224 -83.855 -52.644 83.587 1.00 0.01 C
ATOM 22 P A A 225 -87.373 -54.498 79.489 1.00 0.01 P
ATOM 23 OP1 A A 225 -87.902 -55.306 78.374 1.00 0.01 O
ATOM 24 OP2 A A 225 -87.726 -53.060 79.571 1.00 0.01 O
ATOM 25 O5' A A 225 -87.701 -55.221 80.854 1.00 0.01 O
TER
ATOM 1 O3' C B 417 -89.114 -50.769 92.951 1.00 0.01 O
ATOM 2 P U B 418 -87.575 -50.577 93.354 1.00 0.01 P
ATOM 3 OP1 U B 418 -87.117 -51.854 93.934 1.00 0.01 O
ATOM 4 OP2 U B 418 -87.490 -49.350 94.170 1.00 0.01 O
ATOM 5 O5' U B 418 -86.861 -50.334 91.965 1.00 0.01 O
ATOM 6 C5' U B 418 -86.479 -51.422 91.157 1.00 0.01 C
ATOM 7 C4' U B 418 -85.728 -50.953 89.958 1.00 0.01 C
ATOM 8 O4' U B 418 -86.483 -49.916 89.293 1.00 0.01 O
ATOM 9 C3' U B 418 -84.385 -50.325 90.257 1.00 0.01 C
ATOM 10 O3' U B 418 -83.371 -51.291 90.352 1.00 0.01 O
ATOM 11 C2' U B 418 -84.187 -49.352 89.111 1.00 0.01 C
ATOM 12 O2' U B 418 -83.663 -50.011 87.973 1.00 0.01 O
ATOM 13 C1' U B 418 -85.619 -48.919 88.818 1.00 0.01 C
ATOM 14 N1 U B 418 -85.950 -47.681 89.493 1.00 0.24 N
ATOM 15 C2 U B 418 -85.411 -46.582 88.938 1.00 0.24 C
ATOM 16 O2 U B 418 -84.709 -46.672 87.964 1.00 0.24 O
ATOM 17 N3 U B 418 -85.709 -45.426 89.543 1.00 0.24 N
ATOM 18 C4 U B 418 -86.490 -45.298 90.648 1.00 0.24 C
ATOM 19 O4 U B 418 -86.677 -44.171 91.088 1.00 0.24 O
ATOM 20 C5 U B 418 -87.032 -46.494 91.193 1.00 0.24 C
ATOM 21 C6 U B 418 -86.741 -47.639 90.596 1.00 0.24 C
ATOM 22 P C B 419 -82.090 -51.034 91.269 1.00 0.01 P
ATOM 23 OP1 C B 419 -81.251 -52.222 91.136 1.00 0.01 O
ATOM 24 OP2 C B 419 -82.571 -50.649 92.618 1.00 0.01 O
ATOM 25 O5' C B 419 -81.376 -49.808 90.567 1.00 0.01 O
TER
ATOM 2 P C A 224 -82.090 -50.270 79.321 1.00 0.01 P
ATOM 3 OP1 C A 224 -82.330 -49.523 78.052 1.00 0.01 O
ATOM 4 OP2 C A 224 -82.656 -49.737 80.598 1.00 0.01 O
ATOM 5 O5' C A 224 -82.510 -51.779 79.152 1.00 0.01 O
ATOM 6 C5' C A 224 -83.773 -52.208 79.573 1.00 0.01 C
ATOM 7 C4' C A 224 -83.716 -53.602 80.077 1.00 0.01 C
ATOM 8 O4' C A 224 -82.914 -53.658 81.274 1.00 0.01 O
ATOM 9 C3' C A 224 -85.027 -54.173 80.502 1.00 0.01 C
ATOM 10 O3' C A 224 -85.795 -54.588 79.415 1.00 0.01 O
ATOM 11 C2' C A 224 -84.612 -55.291 81.452 1.00 0.01 C
ATOM 12 O2' C A 224 -84.146 -56.432 80.750 1.00 0.01 O
ATOM 13 C1' C A 224 -83.430 -54.648 82.148 1.00 0.01 C
ATOM 14 N1 C A 224 -83.831 -54.009 83.410 1.00 0.01 N
ATOM 15 C2 C A 224 -84.213 -54.862 84.427 1.00 0.01 C
ATOM 16 O2 C A 224 -84.176 -56.061 84.172 1.00 0.01 O
ATOM 17 N3 C A 224 -84.603 -54.328 85.613 1.00 0.01 N
ATOM 18 C4 C A 224 -84.616 -52.995 85.784 1.00 0.01 C
ATOM 19 N4 C A 224 -84.989 -52.491 86.962 1.00 0.01 N
ATOM 20 C5 C A 224 -84.236 -52.106 84.749 1.00 0.01 C
ATOM 21 C6 C A 224 -83.855 -52.644 83.587 1.00 0.01 C
ATOM 22 P A A 225 -87.373 -54.498 79.489 1.00 0.01 P
ATOM 23 OP1 A A 225 -87.902 -55.306 78.374 1.00 0.01 O
ATOM 24 OP2 A A 225 -87.726 -53.060 79.571 1.00 0.01 O
ATOM 25 O5' A A 225 -87.701 -55.221 80.854 1.00 0.01 O
TER
ATOM 1 O3' C B 417 -89.114 -50.769 92.951 1.00 0.01 O
ATOM 2 P U B 418 -87.575 -50.577 93.354 1.00 0.01 P
ATOM 3 OP1 U B 418 -87.117 -51.854 93.934 1.00 0.01 O
ATOM 4 OP2 U B 418 -87.490 -49.350 94.170 1.00 0.01 O
ATOM 5 O5' U B 418 -86.861 -50.334 91.965 1.00 0.01 O
ATOM 6 C5' U B 418 -86.479 -51.422 91.157 1.00 0.01 C
ATOM 7 C4' U B 418 -85.728 -50.953 89.958 1.00 0.01 C
ATOM 8 O4' U B 418 -86.483 -49.916 89.293 1.00 0.01 O
ATOM 9 C3' U B 418 -84.385 -50.325 90.257 1.00 0.01 C
ATOM 10 O3' U B 418 -83.371 -51.291 90.352 1.00 0.01 O
ATOM 11 C2' U B 418 -84.187 -49.352 89.111 1.00 0.01 C
ATOM 12 O2' U B 418 -83.663 -50.011 87.973 1.00 0.01 O
ATOM 13 C1' U B 418 -85.619 -48.919 88.818 1.00 0.01 C
ATOM 14 N1 U B 418 -85.950 -47.681 89.493 1.00 0.24 N
ATOM 15 C2 U B 418 -85.411 -46.582 88.938 1.00 0.24 C
ATOM 16 O2 U B 418 -84.709 -46.672 87.964 1.00 0.24 O
ATOM 17 N3 U B 418 -85.709 -45.426 89.543 1.00 0.24 N
ATOM 18 C4 U B 418 -86.490 -45.298 90.648 1.00 0.24 C
ATOM 19 O4 U B 418 -86.677 -44.171 91.088 1.00 0.24 O
ATOM 20 C5 U B 418 -87.032 -46.494 91.193 1.00 0.24 C
ATOM 21 C6 U B 418 -86.741 -47.639 90.596 1.00 0.24 C
ATOM 22 P C B 419 -82.090 -51.034 91.269 1.00 0.01 P
ATOM 23 OP1 C B 419 -81.251 -52.222 91.136 1.00 0.01 O
ATOM 24 OP2 C B 419 -82.571 -50.649 92.618 1.00 0.01 O
ATOM 25 O5' C B 419 -81.376 -49.808 90.567 1.00 0.01 O
TER
Atoms:
C2: (-84.213,-54.862,84.427)
OP1: (-82.330,-49.523,78.052)
OP2: (-82.656,-49.737,80.598)
C4: (-84.616,-52.995,85.784)
O5': (-82.510,-51.779,79.152)
C3': (-85.027,-54.173,80.502)
C1': (-83.430,-54.648,82.148)
O4': (-82.914,-53.658,81.274)
C5': (-83.773,-52.208,79.573)
P: (-82.090,-50.270,79.321)
O2: (-84.176,-56.061,84.172)
C4': (-83.716,-53.602,80.077)
C2': (-84.612,-55.291,81.452)
O2': (-84.146,-56.432,80.750)
N1: (-83.831,-54.009,83.410)
N3: (-84.603,-54.328,85.613)
N4: (-84.989,-52.491,86.962)
C6: (-83.855,-52.644,83.587)
C5: (-84.236,-52.106,84.749)
O3': (-85.795,-54.588,79.415)
OP1: (-82.330,-49.523,78.052)
OP2: (-82.656,-49.737,80.598)
C4: (-84.616,-52.995,85.784)
O5': (-82.510,-51.779,79.152)
C3': (-85.027,-54.173,80.502)
C1': (-83.430,-54.648,82.148)
O4': (-82.914,-53.658,81.274)
C5': (-83.773,-52.208,79.573)
P: (-82.090,-50.270,79.321)
O2: (-84.176,-56.061,84.172)
C4': (-83.716,-53.602,80.077)
C2': (-84.612,-55.291,81.452)
O2': (-84.146,-56.432,80.750)
N1: (-83.831,-54.009,83.410)
N3: (-84.603,-54.328,85.613)
N4: (-84.989,-52.491,86.962)
C6: (-83.855,-52.644,83.587)
C5: (-84.236,-52.106,84.749)
O3': (-85.795,-54.588,79.415)
C4: (-86.490,-45.298,90.648)
N3: (-85.709,-45.426,89.543)
OP1: (-87.117,-51.854,93.934)
OP2: (-87.490,-49.350,94.170)
C2: (-85.411,-46.582,88.938)
C1': (-85.619,-48.919,88.818)
C3': (-84.385,-50.325,90.257)
O5': (-86.861,-50.334,91.965)
O4': (-86.483,-49.916,89.293)
C5': (-86.479,-51.422,91.157)
P: (-87.575,-50.577,93.354)
C4': (-85.728,-50.953,89.958)
C2': (-84.187,-49.352,89.111)
O2': (-83.663,-50.011,87.973)
N1: (-85.950,-47.681,89.493)
O4: (-86.677,-44.171,91.088)
O2: (-84.709,-46.672,87.964)
C6: (-86.741,-47.639,90.596)
C5: (-87.032,-46.494,91.193)
O3': (-83.371,-51.291,90.352)
N3: (-85.709,-45.426,89.543)
OP1: (-87.117,-51.854,93.934)
OP2: (-87.490,-49.350,94.170)
C2: (-85.411,-46.582,88.938)
C1': (-85.619,-48.919,88.818)
C3': (-84.385,-50.325,90.257)
O5': (-86.861,-50.334,91.965)
O4': (-86.483,-49.916,89.293)
C5': (-86.479,-51.422,91.157)
P: (-87.575,-50.577,93.354)
C4': (-85.728,-50.953,89.958)
C2': (-84.187,-49.352,89.111)
O2': (-83.663,-50.011,87.973)
N1: (-85.950,-47.681,89.493)
O4: (-86.677,-44.171,91.088)
O2: (-84.709,-46.672,87.964)
C6: (-86.741,-47.639,90.596)
C5: (-87.032,-46.494,91.193)
O3': (-83.371,-51.291,90.352)
Image (generated by PyMOL):