Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2494:A2442
Extra
PDB:
ATOM 1 O3' U A2493 -78.280 -67.699 6.724 1.00 0.01 O
ATOM 2 P C A2494 -78.476 -67.485 8.283 1.00 0.01 P
ATOM 3 OP1 C A2494 -77.266 -68.002 8.922 1.00 0.01 O
ATOM 4 OP2 C A2494 -79.758 -68.058 8.651 1.00 0.01 O
ATOM 5 O5' C A2494 -78.531 -65.913 8.418 1.00 0.01 O
ATOM 6 C5' C A2494 -77.428 -65.129 8.025 1.00 0.01 C
ATOM 7 C4' C A2494 -77.338 -63.840 8.798 1.00 0.01 C
ATOM 8 O4' C A2494 -78.430 -62.984 8.449 1.00 0.01 O
ATOM 9 C3' C A2494 -77.365 -63.943 10.324 1.00 0.01 C
ATOM 10 O3' C A2494 -76.051 -64.055 10.849 1.00 0.01 O
ATOM 11 C2' C A2494 -78.075 -62.664 10.777 1.00 0.01 C
ATOM 12 O2' C A2494 -77.142 -61.757 11.306 1.00 0.01 O
ATOM 13 C1' C A2494 -78.644 -62.073 9.480 1.00 0.01 C
ATOM 14 N1 C A2494 -80.076 -61.759 9.539 1.00 0.01 N
ATOM 15 C2 C A2494 -80.423 -60.619 8.840 1.00 0.01 C
ATOM 16 O2 C A2494 -79.526 -59.985 8.290 1.00 0.01 O
ATOM 17 N3 C A2494 -81.697 -60.208 8.791 1.00 0.01 N
ATOM 18 C4 C A2494 -82.615 -60.916 9.402 1.00 0.01 C
ATOM 19 N4 C A2494 -83.845 -60.468 9.314 1.00 0.01 N
ATOM 20 C5 C A2494 -82.321 -62.097 10.125 1.00 0.01 C
ATOM 21 C6 C A2494 -81.037 -62.488 10.160 1.00 0.01 C
ATOM 22 P G A2495 -75.745 -64.829 12.220 1.00 0.01 P
ATOM 23 OP1 G A2495 -76.229 -66.220 12.064 1.00 0.01 O
ATOM 24 OP2 G A2495 -76.278 -64.010 13.299 1.00 0.01 O
ATOM 25 O5' G A2495 -74.163 -64.814 12.306 1.00 0.01 O
TER
ATOM 1 O3' A B2441 -90.403 -63.491 12.927 1.00 0.01 O
ATOM 2 P U B2442 -91.096 -63.255 11.498 1.00 0.01 P
ATOM 3 OP1 U B2442 -92.445 -63.853 11.536 1.00 0.01 O
ATOM 4 OP2 U B2442 -90.154 -63.723 10.482 1.00 0.01 O
ATOM 5 O5' U B2442 -91.202 -61.680 11.456 1.00 0.01 O
ATOM 6 C5' U B2442 -91.375 -60.985 10.245 1.00 0.01 C
ATOM 7 C4' U B2442 -90.242 -60.027 9.978 1.00 0.01 C
ATOM 8 O4' U B2442 -89.820 -59.397 11.218 1.00 0.01 O
ATOM 9 C3' U B2442 -88.994 -60.653 9.376 1.00 0.01 C
ATOM 10 O3' U B2442 -88.472 -59.806 8.369 1.00 0.01 O
ATOM 11 C2' U B2442 -88.040 -60.691 10.544 1.00 0.01 C
ATOM 12 O2' U B2442 -86.695 -60.681 10.185 1.00 0.01 O
ATOM 13 C1' U B2442 -88.422 -59.437 11.283 1.00 0.01 C
ATOM 14 N1 U B2442 -88.007 -59.425 12.693 1.00 0.01 N
ATOM 15 C2 U B2442 -86.736 -59.040 13.012 1.00 0.01 C
ATOM 16 O2 U B2442 -85.937 -58.699 12.181 1.00 0.01 O
ATOM 17 N3 U B2442 -86.424 -59.053 14.332 1.00 0.01 N
ATOM 18 C4 U B2442 -87.229 -59.410 15.375 1.00 0.01 C
ATOM 19 O4 U B2442 -86.841 -59.373 16.537 1.00 0.01 O
ATOM 20 C5 U B2442 -88.521 -59.797 14.982 1.00 0.01 C
ATOM 21 C6 U B2442 -88.853 -59.779 13.689 1.00 0.01 C
ATOM 22 P A B2443 -89.041 -59.877 6.881 1.00 0.01 P
ATOM 23 OP1 A B2443 -90.480 -59.881 6.971 1.00 0.01 O
ATOM 24 OP2 A B2443 -88.373 -60.989 6.209 1.00 0.01 O
ATOM 25 O5' A B2443 -88.558 -58.519 6.258 1.00 0.01 O
TER
ATOM 2 P C A2494 -78.476 -67.485 8.283 1.00 0.01 P
ATOM 3 OP1 C A2494 -77.266 -68.002 8.922 1.00 0.01 O
ATOM 4 OP2 C A2494 -79.758 -68.058 8.651 1.00 0.01 O
ATOM 5 O5' C A2494 -78.531 -65.913 8.418 1.00 0.01 O
ATOM 6 C5' C A2494 -77.428 -65.129 8.025 1.00 0.01 C
ATOM 7 C4' C A2494 -77.338 -63.840 8.798 1.00 0.01 C
ATOM 8 O4' C A2494 -78.430 -62.984 8.449 1.00 0.01 O
ATOM 9 C3' C A2494 -77.365 -63.943 10.324 1.00 0.01 C
ATOM 10 O3' C A2494 -76.051 -64.055 10.849 1.00 0.01 O
ATOM 11 C2' C A2494 -78.075 -62.664 10.777 1.00 0.01 C
ATOM 12 O2' C A2494 -77.142 -61.757 11.306 1.00 0.01 O
ATOM 13 C1' C A2494 -78.644 -62.073 9.480 1.00 0.01 C
ATOM 14 N1 C A2494 -80.076 -61.759 9.539 1.00 0.01 N
ATOM 15 C2 C A2494 -80.423 -60.619 8.840 1.00 0.01 C
ATOM 16 O2 C A2494 -79.526 -59.985 8.290 1.00 0.01 O
ATOM 17 N3 C A2494 -81.697 -60.208 8.791 1.00 0.01 N
ATOM 18 C4 C A2494 -82.615 -60.916 9.402 1.00 0.01 C
ATOM 19 N4 C A2494 -83.845 -60.468 9.314 1.00 0.01 N
ATOM 20 C5 C A2494 -82.321 -62.097 10.125 1.00 0.01 C
ATOM 21 C6 C A2494 -81.037 -62.488 10.160 1.00 0.01 C
ATOM 22 P G A2495 -75.745 -64.829 12.220 1.00 0.01 P
ATOM 23 OP1 G A2495 -76.229 -66.220 12.064 1.00 0.01 O
ATOM 24 OP2 G A2495 -76.278 -64.010 13.299 1.00 0.01 O
ATOM 25 O5' G A2495 -74.163 -64.814 12.306 1.00 0.01 O
TER
ATOM 1 O3' A B2441 -90.403 -63.491 12.927 1.00 0.01 O
ATOM 2 P U B2442 -91.096 -63.255 11.498 1.00 0.01 P
ATOM 3 OP1 U B2442 -92.445 -63.853 11.536 1.00 0.01 O
ATOM 4 OP2 U B2442 -90.154 -63.723 10.482 1.00 0.01 O
ATOM 5 O5' U B2442 -91.202 -61.680 11.456 1.00 0.01 O
ATOM 6 C5' U B2442 -91.375 -60.985 10.245 1.00 0.01 C
ATOM 7 C4' U B2442 -90.242 -60.027 9.978 1.00 0.01 C
ATOM 8 O4' U B2442 -89.820 -59.397 11.218 1.00 0.01 O
ATOM 9 C3' U B2442 -88.994 -60.653 9.376 1.00 0.01 C
ATOM 10 O3' U B2442 -88.472 -59.806 8.369 1.00 0.01 O
ATOM 11 C2' U B2442 -88.040 -60.691 10.544 1.00 0.01 C
ATOM 12 O2' U B2442 -86.695 -60.681 10.185 1.00 0.01 O
ATOM 13 C1' U B2442 -88.422 -59.437 11.283 1.00 0.01 C
ATOM 14 N1 U B2442 -88.007 -59.425 12.693 1.00 0.01 N
ATOM 15 C2 U B2442 -86.736 -59.040 13.012 1.00 0.01 C
ATOM 16 O2 U B2442 -85.937 -58.699 12.181 1.00 0.01 O
ATOM 17 N3 U B2442 -86.424 -59.053 14.332 1.00 0.01 N
ATOM 18 C4 U B2442 -87.229 -59.410 15.375 1.00 0.01 C
ATOM 19 O4 U B2442 -86.841 -59.373 16.537 1.00 0.01 O
ATOM 20 C5 U B2442 -88.521 -59.797 14.982 1.00 0.01 C
ATOM 21 C6 U B2442 -88.853 -59.779 13.689 1.00 0.01 C
ATOM 22 P A B2443 -89.041 -59.877 6.881 1.00 0.01 P
ATOM 23 OP1 A B2443 -90.480 -59.881 6.971 1.00 0.01 O
ATOM 24 OP2 A B2443 -88.373 -60.989 6.209 1.00 0.01 O
ATOM 25 O5' A B2443 -88.558 -58.519 6.258 1.00 0.01 O
TER
Atoms:
C2: (-80.423,-60.619,8.840)
OP1: (-77.266,-68.002,8.922)
OP2: (-79.758,-68.058,8.651)
C4: (-82.615,-60.916,9.402)
O5': (-78.531,-65.913,8.418)
C3': (-77.365,-63.943,10.324)
C1': (-78.644,-62.073,9.480)
O4': (-78.430,-62.984,8.449)
C5': (-77.428,-65.129,8.025)
P: (-78.476,-67.485,8.283)
O2: (-79.526,-59.985,8.290)
C4': (-77.338,-63.840,8.798)
C2': (-78.075,-62.664,10.777)
O2': (-77.142,-61.757,11.306)
N1: (-80.076,-61.759,9.539)
N3: (-81.697,-60.208,8.791)
N4: (-83.845,-60.468,9.314)
C6: (-81.037,-62.488,10.160)
C5: (-82.321,-62.097,10.125)
O3': (-76.051,-64.055,10.849)
OP1: (-77.266,-68.002,8.922)
OP2: (-79.758,-68.058,8.651)
C4: (-82.615,-60.916,9.402)
O5': (-78.531,-65.913,8.418)
C3': (-77.365,-63.943,10.324)
C1': (-78.644,-62.073,9.480)
O4': (-78.430,-62.984,8.449)
C5': (-77.428,-65.129,8.025)
P: (-78.476,-67.485,8.283)
O2: (-79.526,-59.985,8.290)
C4': (-77.338,-63.840,8.798)
C2': (-78.075,-62.664,10.777)
O2': (-77.142,-61.757,11.306)
N1: (-80.076,-61.759,9.539)
N3: (-81.697,-60.208,8.791)
N4: (-83.845,-60.468,9.314)
C6: (-81.037,-62.488,10.160)
C5: (-82.321,-62.097,10.125)
O3': (-76.051,-64.055,10.849)
C4: (-87.229,-59.410,15.375)
N3: (-86.424,-59.053,14.332)
OP1: (-92.445,-63.853,11.536)
OP2: (-90.154,-63.723,10.482)
C2: (-86.736,-59.040,13.012)
C1': (-88.422,-59.437,11.283)
C3': (-88.994,-60.653,9.376)
O5': (-91.202,-61.680,11.456)
O4': (-89.820,-59.397,11.218)
C5': (-91.375,-60.985,10.245)
P: (-91.096,-63.255,11.498)
C4': (-90.242,-60.027,9.978)
C2': (-88.040,-60.691,10.544)
O2': (-86.695,-60.681,10.185)
N1: (-88.007,-59.425,12.693)
O4: (-86.841,-59.373,16.537)
O2: (-85.937,-58.699,12.181)
C6: (-88.853,-59.779,13.689)
C5: (-88.521,-59.797,14.982)
O3': (-88.472,-59.806,8.369)
N3: (-86.424,-59.053,14.332)
OP1: (-92.445,-63.853,11.536)
OP2: (-90.154,-63.723,10.482)
C2: (-86.736,-59.040,13.012)
C1': (-88.422,-59.437,11.283)
C3': (-88.994,-60.653,9.376)
O5': (-91.202,-61.680,11.456)
O4': (-89.820,-59.397,11.218)
C5': (-91.375,-60.985,10.245)
P: (-91.096,-63.255,11.498)
C4': (-90.242,-60.027,9.978)
C2': (-88.040,-60.691,10.544)
O2': (-86.695,-60.681,10.185)
N1: (-88.007,-59.425,12.693)
O4: (-86.841,-59.373,16.537)
O2: (-85.937,-58.699,12.181)
C6: (-88.853,-59.779,13.689)
C5: (-88.521,-59.797,14.982)
O3': (-88.472,-59.806,8.369)
Image (generated by PyMOL):