Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2493:A2441
Extra
PDB:
ATOM 1 O3' U A2492 -49.213 129.723 171.655 1.00 0.01 O
ATOM 2 P C A2493 -49.011 131.263 171.264 1.00 0.01 P
ATOM 3 OP1 C A2493 -47.795 131.728 171.975 1.00 0.01 O
ATOM 4 OP2 C A2493 -50.316 131.948 171.517 1.00 0.01 O
ATOM 5 O5' C A2493 -48.703 131.199 169.709 1.00 0.01 O
ATOM 6 C5' C A2493 -47.484 130.633 169.256 1.00 0.01 C
ATOM 7 C4' C A2493 -46.982 131.267 167.985 1.00 0.01 C
ATOM 8 O4' C A2493 -47.879 130.988 166.893 1.00 0.01 O
ATOM 9 C3' C A2493 -46.787 132.773 168.001 1.00 0.01 C
ATOM 10 O3' C A2493 -45.437 133.099 168.321 1.00 0.01 O
ATOM 11 C2' C A2493 -47.213 133.231 166.586 1.00 0.01 C
ATOM 12 O2' C A2493 -46.109 133.736 165.854 1.00 0.01 O
ATOM 13 C1' C A2493 -47.712 131.943 165.907 1.00 0.01 C
ATOM 14 N1 C A2493 -48.984 132.108 165.177 1.00 0.01 N
ATOM 15 C2 C A2493 -49.157 131.421 163.993 1.00 0.01 C
ATOM 16 O2 C A2493 -48.265 130.717 163.595 1.00 0.01 O
ATOM 17 N3 C A2493 -50.269 131.526 163.276 1.00 0.01 N
ATOM 18 C4 C A2493 -51.226 132.306 163.721 1.00 0.01 C
ATOM 19 N4 C A2493 -52.326 132.396 163.012 1.00 0.01 N
ATOM 20 C5 C A2493 -51.130 133.035 164.916 1.00 0.01 C
ATOM 21 C6 C A2493 -49.996 132.898 165.614 1.00 0.01 C
ATOM 22 P G A2494 -45.051 134.431 169.131 1.00 0.01 P
ATOM 23 OP1 G A2494 -45.797 134.397 170.412 1.00 0.01 O
ATOM 24 OP2 G A2494 -45.259 135.553 168.230 1.00 0.01 O
ATOM 25 O5' G A2494 -43.486 134.274 169.408 1.00 0.01 O
TER
ATOM 1 O3' A B2440 -58.818 137.132 164.170 1.00 0.01 O
ATOM 2 P U B2441 -59.512 135.784 163.641 1.00 2.26 P
ATOM 3 OP1 U B2441 -60.974 136.047 163.540 1.00 2.26 O
ATOM 4 OP2 U B2441 -59.047 134.681 164.504 1.00 2.26 O
ATOM 5 O5' U B2441 -58.878 135.630 162.196 1.00 2.26 O
ATOM 6 C5' U B2441 -59.206 134.531 161.369 1.00 2.26 C
ATOM 7 C4' U B2441 -57.979 133.800 160.911 1.00 2.26 C
ATOM 8 O4' U B2441 -57.073 134.734 160.245 1.00 2.26 O
ATOM 9 C3' U B2441 -57.177 133.161 162.023 1.00 2.26 C
ATOM 10 O3' U B2441 -56.582 131.958 161.544 1.00 2.26 O
ATOM 11 C2' U B2441 -56.101 134.200 162.286 1.00 2.26 C
ATOM 12 O2' U B2441 -54.938 133.695 162.870 1.00 2.26 O
ATOM 13 C1' U B2441 -55.825 134.717 160.893 1.00 2.26 C
ATOM 14 N1 U B2441 -55.274 136.068 160.880 1.00 2.23 N
ATOM 15 C2 U B2441 -54.002 136.232 160.411 1.00 2.23 C
ATOM 16 O2 U B2441 -53.310 135.316 159.976 1.00 2.23 O
ATOM 17 N3 U B2441 -53.575 137.533 160.433 1.00 2.23 N
ATOM 18 C4 U B2441 -54.226 138.649 160.881 1.00 2.23 C
ATOM 19 O4 U B2441 -53.671 139.747 160.845 1.00 2.23 O
ATOM 20 C5 U B2441 -55.525 138.376 161.372 1.00 2.23 C
ATOM 21 C6 U B2441 -55.984 137.129 161.355 1.00 2.23 C
ATOM 22 P A B2442 -57.480 130.649 161.344 1.00 0.01 P
ATOM 23 OP1 A B2442 -58.856 131.106 161.025 1.00 0.01 O
ATOM 24 OP2 A B2442 -57.266 129.795 162.519 1.00 0.01 O
ATOM 25 O5' A B2442 -56.829 129.966 160.087 1.00 0.01 O
TER
ATOM 2 P C A2493 -49.011 131.263 171.264 1.00 0.01 P
ATOM 3 OP1 C A2493 -47.795 131.728 171.975 1.00 0.01 O
ATOM 4 OP2 C A2493 -50.316 131.948 171.517 1.00 0.01 O
ATOM 5 O5' C A2493 -48.703 131.199 169.709 1.00 0.01 O
ATOM 6 C5' C A2493 -47.484 130.633 169.256 1.00 0.01 C
ATOM 7 C4' C A2493 -46.982 131.267 167.985 1.00 0.01 C
ATOM 8 O4' C A2493 -47.879 130.988 166.893 1.00 0.01 O
ATOM 9 C3' C A2493 -46.787 132.773 168.001 1.00 0.01 C
ATOM 10 O3' C A2493 -45.437 133.099 168.321 1.00 0.01 O
ATOM 11 C2' C A2493 -47.213 133.231 166.586 1.00 0.01 C
ATOM 12 O2' C A2493 -46.109 133.736 165.854 1.00 0.01 O
ATOM 13 C1' C A2493 -47.712 131.943 165.907 1.00 0.01 C
ATOM 14 N1 C A2493 -48.984 132.108 165.177 1.00 0.01 N
ATOM 15 C2 C A2493 -49.157 131.421 163.993 1.00 0.01 C
ATOM 16 O2 C A2493 -48.265 130.717 163.595 1.00 0.01 O
ATOM 17 N3 C A2493 -50.269 131.526 163.276 1.00 0.01 N
ATOM 18 C4 C A2493 -51.226 132.306 163.721 1.00 0.01 C
ATOM 19 N4 C A2493 -52.326 132.396 163.012 1.00 0.01 N
ATOM 20 C5 C A2493 -51.130 133.035 164.916 1.00 0.01 C
ATOM 21 C6 C A2493 -49.996 132.898 165.614 1.00 0.01 C
ATOM 22 P G A2494 -45.051 134.431 169.131 1.00 0.01 P
ATOM 23 OP1 G A2494 -45.797 134.397 170.412 1.00 0.01 O
ATOM 24 OP2 G A2494 -45.259 135.553 168.230 1.00 0.01 O
ATOM 25 O5' G A2494 -43.486 134.274 169.408 1.00 0.01 O
TER
ATOM 1 O3' A B2440 -58.818 137.132 164.170 1.00 0.01 O
ATOM 2 P U B2441 -59.512 135.784 163.641 1.00 2.26 P
ATOM 3 OP1 U B2441 -60.974 136.047 163.540 1.00 2.26 O
ATOM 4 OP2 U B2441 -59.047 134.681 164.504 1.00 2.26 O
ATOM 5 O5' U B2441 -58.878 135.630 162.196 1.00 2.26 O
ATOM 6 C5' U B2441 -59.206 134.531 161.369 1.00 2.26 C
ATOM 7 C4' U B2441 -57.979 133.800 160.911 1.00 2.26 C
ATOM 8 O4' U B2441 -57.073 134.734 160.245 1.00 2.26 O
ATOM 9 C3' U B2441 -57.177 133.161 162.023 1.00 2.26 C
ATOM 10 O3' U B2441 -56.582 131.958 161.544 1.00 2.26 O
ATOM 11 C2' U B2441 -56.101 134.200 162.286 1.00 2.26 C
ATOM 12 O2' U B2441 -54.938 133.695 162.870 1.00 2.26 O
ATOM 13 C1' U B2441 -55.825 134.717 160.893 1.00 2.26 C
ATOM 14 N1 U B2441 -55.274 136.068 160.880 1.00 2.23 N
ATOM 15 C2 U B2441 -54.002 136.232 160.411 1.00 2.23 C
ATOM 16 O2 U B2441 -53.310 135.316 159.976 1.00 2.23 O
ATOM 17 N3 U B2441 -53.575 137.533 160.433 1.00 2.23 N
ATOM 18 C4 U B2441 -54.226 138.649 160.881 1.00 2.23 C
ATOM 19 O4 U B2441 -53.671 139.747 160.845 1.00 2.23 O
ATOM 20 C5 U B2441 -55.525 138.376 161.372 1.00 2.23 C
ATOM 21 C6 U B2441 -55.984 137.129 161.355 1.00 2.23 C
ATOM 22 P A B2442 -57.480 130.649 161.344 1.00 0.01 P
ATOM 23 OP1 A B2442 -58.856 131.106 161.025 1.00 0.01 O
ATOM 24 OP2 A B2442 -57.266 129.795 162.519 1.00 0.01 O
ATOM 25 O5' A B2442 -56.829 129.966 160.087 1.00 0.01 O
TER
Atoms:
C2: (-49.157,131.421,163.993)
OP1: (-47.795,131.728,171.975)
OP2: (-50.316,131.948,171.517)
C4: (-51.226,132.306,163.721)
O5': (-48.703,131.199,169.709)
C3': (-46.787,132.773,168.001)
C1': (-47.712,131.943,165.907)
O4': (-47.879,130.988,166.893)
C5': (-47.484,130.633,169.256)
P: (-49.011,131.263,171.264)
O2: (-48.265,130.717,163.595)
C4': (-46.982,131.267,167.985)
C2': (-47.213,133.231,166.586)
O2': (-46.109,133.736,165.854)
N1: (-48.984,132.108,165.177)
N3: (-50.269,131.526,163.276)
N4: (-52.326,132.396,163.012)
C6: (-49.996,132.898,165.614)
C5: (-51.130,133.035,164.916)
O3': (-45.437,133.099,168.321)
OP1: (-47.795,131.728,171.975)
OP2: (-50.316,131.948,171.517)
C4: (-51.226,132.306,163.721)
O5': (-48.703,131.199,169.709)
C3': (-46.787,132.773,168.001)
C1': (-47.712,131.943,165.907)
O4': (-47.879,130.988,166.893)
C5': (-47.484,130.633,169.256)
P: (-49.011,131.263,171.264)
O2: (-48.265,130.717,163.595)
C4': (-46.982,131.267,167.985)
C2': (-47.213,133.231,166.586)
O2': (-46.109,133.736,165.854)
N1: (-48.984,132.108,165.177)
N3: (-50.269,131.526,163.276)
N4: (-52.326,132.396,163.012)
C6: (-49.996,132.898,165.614)
C5: (-51.130,133.035,164.916)
O3': (-45.437,133.099,168.321)
C4: (-54.226,138.649,160.881)
N3: (-53.575,137.533,160.433)
OP1: (-60.974,136.047,163.540)
OP2: (-59.047,134.681,164.504)
C2: (-54.002,136.232,160.411)
C1': (-55.825,134.717,160.893)
C3': (-57.177,133.161,162.023)
O5': (-58.878,135.630,162.196)
O4': (-57.073,134.734,160.245)
C5': (-59.206,134.531,161.369)
P: (-59.512,135.784,163.641)
C4': (-57.979,133.800,160.911)
C2': (-56.101,134.200,162.286)
O2': (-54.938,133.695,162.870)
N1: (-55.274,136.068,160.880)
O4: (-53.671,139.747,160.845)
O2: (-53.310,135.316,159.976)
C6: (-55.984,137.129,161.355)
C5: (-55.525,138.376,161.372)
O3': (-56.582,131.958,161.544)
N3: (-53.575,137.533,160.433)
OP1: (-60.974,136.047,163.540)
OP2: (-59.047,134.681,164.504)
C2: (-54.002,136.232,160.411)
C1': (-55.825,134.717,160.893)
C3': (-57.177,133.161,162.023)
O5': (-58.878,135.630,162.196)
O4': (-57.073,134.734,160.245)
C5': (-59.206,134.531,161.369)
P: (-59.512,135.784,163.641)
C4': (-57.979,133.800,160.911)
C2': (-56.101,134.200,162.286)
O2': (-54.938,133.695,162.870)
N1: (-55.274,136.068,160.880)
O4: (-53.671,139.747,160.845)
O2: (-53.310,135.316,159.976)
C6: (-55.984,137.129,161.355)
C5: (-55.525,138.376,161.372)
O3': (-56.582,131.958,161.544)
Image (generated by PyMOL):