ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8T:A435:A433

Extra

PDB:
ATOM 1 O3' C A 434 -10.837 173.759 178.989 1.00 33.81 O
ATOM 2 P C A 435 -11.496 174.036 180.419 1.00 50.58 P
ATOM 3 OP1 C A 435 -11.064 172.939 181.318 1.00 50.58 O
ATOM 4 OP2 C A 435 -12.941 174.250 180.191 1.00 50.58 O
ATOM 5 O5' C A 435 -10.822 175.402 180.865 1.00 50.58 O
ATOM 6 C5' C A 435 -9.428 175.478 181.076 1.00 50.58 C
ATOM 7 C4' C A 435 -8.873 176.830 180.708 1.00 50.58 C
ATOM 8 O4' C A 435 -9.656 177.431 179.651 1.00 50.58 O
ATOM 9 C3' C A 435 -8.897 177.891 181.787 1.00 50.58 C
ATOM 10 O3' C A 435 -7.903 177.698 182.772 1.00 50.58 O
ATOM 11 C2' C A 435 -8.701 179.156 180.972 1.00 50.58 C
ATOM 12 O2' C A 435 -7.338 179.300 180.599 1.00 50.58 O
ATOM 13 C1' C A 435 -9.508 178.835 179.716 1.00 50.58 C
ATOM 14 N1 C A 435 -10.841 179.474 179.714 1.00 51.03 N
ATOM 15 C2 C A 435 -10.914 180.861 179.867 1.00 51.03 C
ATOM 16 O2 C A 435 -9.868 181.491 180.037 1.00 51.03 O
ATOM 17 N3 C A 435 -12.116 181.488 179.834 1.00 51.03 N
ATOM 18 C4 C A 435 -13.240 180.789 179.644 1.00 51.03 C
ATOM 19 N4 C A 435 -14.405 181.447 179.621 1.00 51.03 N
ATOM 20 C5 C A 435 -13.200 179.374 179.466 1.00 51.03 C
ATOM 21 C6 C A 435 -11.994 178.769 179.498 1.00 51.03 C
ATOM 22 P U A 436 -8.316 177.260 184.263 1.00 34.43 P
ATOM 23 OP1 U A 436 -7.679 175.943 184.516 1.00 34.43 O
ATOM 24 OP2 U A 436 -9.805 177.374 184.370 1.00 34.43 O
ATOM 25 O5' U A 436 -7.621 178.377 185.166 1.00 34.43 O
TER

ATOM 1 O3' C B 432 -20.221 179.492 173.934 1.00 16.31 O
ATOM 2 P U B 433 -20.933 178.871 175.230 1.00 28.26 P
ATOM 3 OP1 U B 433 -21.735 177.711 174.779 1.00 28.26 O
ATOM 4 OP2 U B 433 -21.616 179.961 175.925 1.00 28.26 O
ATOM 5 O5' U B 433 -19.695 178.374 176.076 1.00 28.26 O
ATOM 6 C5' U B 433 -18.849 177.354 175.577 1.00 28.26 C
ATOM 7 C4' U B 433 -17.421 177.591 175.962 1.00 28.26 C
ATOM 8 O4' U B 433 -17.069 178.964 175.642 1.00 28.26 O
ATOM 9 C3' U B 433 -17.111 177.408 177.456 1.00 28.26 C
ATOM 10 O3' U B 433 -15.818 176.828 177.617 1.00 28.26 O
ATOM 11 C2' U B 433 -17.075 178.838 177.963 1.00 28.26 C
ATOM 12 O2' U B 433 -16.311 179.024 179.142 1.00 28.26 O
ATOM 13 C1' U B 433 -16.455 179.540 176.764 1.00 28.26 C
ATOM 14 N1 U B 433 -16.672 180.973 176.735 1.00 28.67 N
ATOM 15 C2 U B 433 -15.526 181.733 176.831 1.00 28.67 C
ATOM 16 O2 U B 433 -14.413 181.236 176.905 1.00 28.67 O
ATOM 17 N3 U B 433 -15.732 183.089 176.822 1.00 28.67 N
ATOM 18 C4 U B 433 -16.952 183.739 176.733 1.00 28.67 C
ATOM 19 O4 U B 433 -16.995 184.986 176.730 1.00 28.67 O
ATOM 20 C5 U B 433 -18.088 182.847 176.650 1.00 28.67 C
ATOM 21 C6 U B 433 -17.915 181.518 176.658 1.00 28.67 C
ATOM 22 P C B 434 -15.577 175.296 177.224 1.00 33.81 P
ATOM 23 OP1 C B 434 -16.025 175.134 175.812 1.00 33.81 O
ATOM 24 OP2 C B 434 -16.233 174.470 178.282 1.00 33.81 O
ATOM 25 O5' C B 434 -13.983 175.136 177.311 1.00 33.81 O
TER

Atoms:
C2: (-10.914,180.861,179.867)
OP1: (-11.064,172.939,181.318)
OP2: (-12.941,174.250,180.191)
C4: (-13.240,180.789,179.644)
O5': (-10.822,175.402,180.865)
C3': (-8.897,177.891,181.787)
C1': (-9.508,178.835,179.716)
O4': (-9.656,177.431,179.651)
C5': (-9.428,175.478,181.076)
P: (-11.496,174.036,180.419)
O2: (-9.868,181.491,180.037)
C4': (-8.873,176.830,180.708)
C2': (-8.701,179.156,180.972)
O2': (-7.338,179.300,180.599)
N1: (-10.841,179.474,179.714)
N3: (-12.116,181.488,179.834)
N4: (-14.405,181.447,179.621)
C6: (-11.994,178.769,179.498)
C5: (-13.200,179.374,179.466)
O3': (-7.903,177.698,182.772)
C4: (-16.952,183.739,176.733)
N3: (-15.732,183.089,176.822)
OP1: (-21.735,177.711,174.779)
OP2: (-21.616,179.961,175.925)
C2: (-15.526,181.733,176.831)
C1': (-16.455,179.540,176.764)
C3': (-17.111,177.408,177.456)
O5': (-19.695,178.374,176.076)
O4': (-17.069,178.964,175.642)
C5': (-18.849,177.354,175.577)
P: (-20.933,178.871,175.230)
C4': (-17.421,177.591,175.962)
C2': (-17.075,178.838,177.963)
O2': (-16.311,179.024,179.142)
N1: (-16.672,180.973,176.735)
O4: (-16.995,184.986,176.730)
O2: (-14.413,181.236,176.905)
C6: (-17.915,181.518,176.658)
C5: (-18.088,182.847,176.650)
O3': (-15.818,176.828,177.617)
Image (generated by PyMOL):
PyMOL image
show in jmol