Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11440:11438
Extra
PDB:
ATOM 1 O3' U A1439 48.676 37.307 109.803 1.00 52.30 O
ATOM 2 P C A1440 48.749 38.587 110.765 1.00 55.29 P
ATOM 3 OP1 C A1440 48.142 39.759 110.013 1.00 55.41 O
ATOM 4 OP2 C A1440 50.152 38.705 111.230 1.00 55.54 O
ATOM 5 O5' C A1440 47.827 38.159 111.990 1.00 55.50 O
ATOM 6 C5' C A1440 46.507 38.636 112.116 1.00 55.64 C
ATOM 7 C4' C A1440 46.268 39.167 113.488 1.00 56.24 C
ATOM 8 O4' C A1440 46.541 38.139 114.469 1.00 56.24 O
ATOM 9 C3' C A1440 47.142 40.320 113.893 1.00 56.77 C
ATOM 10 O3' C A1440 46.598 41.530 113.445 1.00 57.00 O
ATOM 11 C2' C A1440 47.170 40.198 115.408 1.00 57.23 C
ATOM 12 O2' C A1440 45.971 40.697 115.952 1.00 57.53 O
ATOM 13 C1' C A1440 47.146 38.694 115.600 1.00 56.82 C
ATOM 14 N1 C A1440 48.476 38.083 115.740 1.00 56.73 N
ATOM 15 C2 C A1440 49.415 38.350 116.733 1.00 57.20 C
ATOM 16 O2 C A1440 49.233 39.235 117.577 1.00 57.76 O
ATOM 17 N3 C A1440 50.563 37.629 116.755 1.00 57.05 N
ATOM 18 C4 C A1440 50.775 36.668 115.866 1.00 56.47 C
ATOM 19 N4 C A1440 51.907 36.009 115.953 1.00 56.37 N
ATOM 20 C5 C A1440 49.847 36.342 114.854 1.00 55.98 C
ATOM 21 C6 C A1440 48.733 37.076 114.862 1.00 56.14 C
ATOM 22 P C A1441 47.508 42.656 112.745 1.00 54.31 P
ATOM 23 OP1 C A1441 46.596 43.800 112.446 1.00 54.57 O
ATOM 24 OP2 C A1441 48.307 42.003 111.558 1.00 53.75 O
ATOM 25 O5' C A1441 48.487 43.056 113.931 1.00 54.87 O
TER
ATOM 1 O3' G B1437 49.551 28.053 113.473 1.00 50.00 O
ATOM 2 P U B1438 51.081 28.147 112.993 1.00 46.66 P
ATOM 3 OP1 U B1438 51.138 27.714 111.581 1.00 46.12 O
ATOM 4 OP2 U B1438 51.887 27.427 114.004 1.00 46.87 O
ATOM 5 O5' U B1438 51.367 29.687 113.073 1.00 47.09 O
ATOM 6 C5' U B1438 50.663 30.577 112.245 1.00 47.01 C
ATOM 7 C4' U B1438 50.563 31.918 112.881 1.00 47.56 C
ATOM 8 O4' U B1438 49.475 31.895 113.825 1.00 47.80 O
ATOM 9 C3' U B1438 51.801 32.367 113.659 1.00 48.01 C
ATOM 10 O3' U B1438 51.956 33.766 113.515 1.00 48.36 O
ATOM 11 C2' U B1438 51.425 32.069 115.097 1.00 48.38 C
ATOM 12 O2' U B1438 52.068 32.873 116.062 1.00 48.97 O
ATOM 13 C1' U B1438 49.937 32.336 115.083 1.00 48.36 C
ATOM 14 N1 U B1438 49.223 31.609 116.125 1.00 48.48 N
ATOM 15 C2 U B1438 49.018 32.345 117.283 1.00 49.06 C
ATOM 16 O2 U B1438 49.352 33.511 117.428 1.00 49.45 O
ATOM 17 N3 U B1438 48.381 31.656 118.259 1.00 49.18 N
ATOM 18 C4 U B1438 47.985 30.351 118.147 1.00 48.78 C
ATOM 19 O4 U B1438 47.427 29.876 119.112 1.00 48.97 O
ATOM 20 C5 U B1438 48.261 29.662 116.923 1.00 48.19 C
ATOM 21 C6 U B1438 48.877 30.296 115.945 1.00 48.05 C
ATOM 22 P U B1439 52.435 34.367 112.119 1.00 52.36 P
ATOM 23 OP1 U B1439 53.035 33.233 111.336 1.00 51.83 O
ATOM 24 OP2 U B1439 53.274 35.576 112.428 1.00 52.86 O
ATOM 25 O5' U B1439 51.059 34.824 111.466 1.00 52.20 O
TER
ATOM 2 P C A1440 48.749 38.587 110.765 1.00 55.29 P
ATOM 3 OP1 C A1440 48.142 39.759 110.013 1.00 55.41 O
ATOM 4 OP2 C A1440 50.152 38.705 111.230 1.00 55.54 O
ATOM 5 O5' C A1440 47.827 38.159 111.990 1.00 55.50 O
ATOM 6 C5' C A1440 46.507 38.636 112.116 1.00 55.64 C
ATOM 7 C4' C A1440 46.268 39.167 113.488 1.00 56.24 C
ATOM 8 O4' C A1440 46.541 38.139 114.469 1.00 56.24 O
ATOM 9 C3' C A1440 47.142 40.320 113.893 1.00 56.77 C
ATOM 10 O3' C A1440 46.598 41.530 113.445 1.00 57.00 O
ATOM 11 C2' C A1440 47.170 40.198 115.408 1.00 57.23 C
ATOM 12 O2' C A1440 45.971 40.697 115.952 1.00 57.53 O
ATOM 13 C1' C A1440 47.146 38.694 115.600 1.00 56.82 C
ATOM 14 N1 C A1440 48.476 38.083 115.740 1.00 56.73 N
ATOM 15 C2 C A1440 49.415 38.350 116.733 1.00 57.20 C
ATOM 16 O2 C A1440 49.233 39.235 117.577 1.00 57.76 O
ATOM 17 N3 C A1440 50.563 37.629 116.755 1.00 57.05 N
ATOM 18 C4 C A1440 50.775 36.668 115.866 1.00 56.47 C
ATOM 19 N4 C A1440 51.907 36.009 115.953 1.00 56.37 N
ATOM 20 C5 C A1440 49.847 36.342 114.854 1.00 55.98 C
ATOM 21 C6 C A1440 48.733 37.076 114.862 1.00 56.14 C
ATOM 22 P C A1441 47.508 42.656 112.745 1.00 54.31 P
ATOM 23 OP1 C A1441 46.596 43.800 112.446 1.00 54.57 O
ATOM 24 OP2 C A1441 48.307 42.003 111.558 1.00 53.75 O
ATOM 25 O5' C A1441 48.487 43.056 113.931 1.00 54.87 O
TER
ATOM 1 O3' G B1437 49.551 28.053 113.473 1.00 50.00 O
ATOM 2 P U B1438 51.081 28.147 112.993 1.00 46.66 P
ATOM 3 OP1 U B1438 51.138 27.714 111.581 1.00 46.12 O
ATOM 4 OP2 U B1438 51.887 27.427 114.004 1.00 46.87 O
ATOM 5 O5' U B1438 51.367 29.687 113.073 1.00 47.09 O
ATOM 6 C5' U B1438 50.663 30.577 112.245 1.00 47.01 C
ATOM 7 C4' U B1438 50.563 31.918 112.881 1.00 47.56 C
ATOM 8 O4' U B1438 49.475 31.895 113.825 1.00 47.80 O
ATOM 9 C3' U B1438 51.801 32.367 113.659 1.00 48.01 C
ATOM 10 O3' U B1438 51.956 33.766 113.515 1.00 48.36 O
ATOM 11 C2' U B1438 51.425 32.069 115.097 1.00 48.38 C
ATOM 12 O2' U B1438 52.068 32.873 116.062 1.00 48.97 O
ATOM 13 C1' U B1438 49.937 32.336 115.083 1.00 48.36 C
ATOM 14 N1 U B1438 49.223 31.609 116.125 1.00 48.48 N
ATOM 15 C2 U B1438 49.018 32.345 117.283 1.00 49.06 C
ATOM 16 O2 U B1438 49.352 33.511 117.428 1.00 49.45 O
ATOM 17 N3 U B1438 48.381 31.656 118.259 1.00 49.18 N
ATOM 18 C4 U B1438 47.985 30.351 118.147 1.00 48.78 C
ATOM 19 O4 U B1438 47.427 29.876 119.112 1.00 48.97 O
ATOM 20 C5 U B1438 48.261 29.662 116.923 1.00 48.19 C
ATOM 21 C6 U B1438 48.877 30.296 115.945 1.00 48.05 C
ATOM 22 P U B1439 52.435 34.367 112.119 1.00 52.36 P
ATOM 23 OP1 U B1439 53.035 33.233 111.336 1.00 51.83 O
ATOM 24 OP2 U B1439 53.274 35.576 112.428 1.00 52.86 O
ATOM 25 O5' U B1439 51.059 34.824 111.466 1.00 52.20 O
TER
Atoms:
C2: (49.415,38.350,116.733)
OP1: (48.142,39.759,110.013)
OP2: (50.152,38.705,111.230)
C4: (50.775,36.668,115.866)
O5': (47.827,38.159,111.990)
C3': (47.142,40.320,113.893)
C1': (47.146,38.694,115.600)
O4': (46.541,38.139,114.469)
C5': (46.507,38.636,112.116)
P: (48.749,38.587,110.765)
O2: (49.233,39.235,117.577)
C4': (46.268,39.167,113.488)
C2': (47.170,40.198,115.408)
O2': (45.971,40.697,115.952)
N1: (48.476,38.083,115.740)
N3: (50.563,37.629,116.755)
N4: (51.907,36.009,115.953)
C6: (48.733,37.076,114.862)
C5: (49.847,36.342,114.854)
O3': (46.598,41.530,113.445)
OP1: (48.142,39.759,110.013)
OP2: (50.152,38.705,111.230)
C4: (50.775,36.668,115.866)
O5': (47.827,38.159,111.990)
C3': (47.142,40.320,113.893)
C1': (47.146,38.694,115.600)
O4': (46.541,38.139,114.469)
C5': (46.507,38.636,112.116)
P: (48.749,38.587,110.765)
O2: (49.233,39.235,117.577)
C4': (46.268,39.167,113.488)
C2': (47.170,40.198,115.408)
O2': (45.971,40.697,115.952)
N1: (48.476,38.083,115.740)
N3: (50.563,37.629,116.755)
N4: (51.907,36.009,115.953)
C6: (48.733,37.076,114.862)
C5: (49.847,36.342,114.854)
O3': (46.598,41.530,113.445)
C4: (47.985,30.351,118.147)
N3: (48.381,31.656,118.259)
OP1: (51.138,27.714,111.581)
OP2: (51.887,27.427,114.004)
C2: (49.018,32.345,117.283)
C1': (49.937,32.336,115.083)
C3': (51.801,32.367,113.659)
O5': (51.367,29.687,113.073)
O4': (49.475,31.895,113.825)
C5': (50.663,30.577,112.245)
P: (51.081,28.147,112.993)
C4': (50.563,31.918,112.881)
C2': (51.425,32.069,115.097)
O2': (52.068,32.873,116.062)
N1: (49.223,31.609,116.125)
O4: (47.427,29.876,119.112)
O2: (49.352,33.511,117.428)
C6: (48.877,30.296,115.945)
C5: (48.261,29.662,116.923)
O3': (51.956,33.766,113.515)
N3: (48.381,31.656,118.259)
OP1: (51.138,27.714,111.581)
OP2: (51.887,27.427,114.004)
C2: (49.018,32.345,117.283)
C1': (49.937,32.336,115.083)
C3': (51.801,32.367,113.659)
O5': (51.367,29.687,113.073)
O4': (49.475,31.895,113.825)
C5': (50.663,30.577,112.245)
P: (51.081,28.147,112.993)
C4': (50.563,31.918,112.881)
C2': (51.425,32.069,115.097)
O2': (52.068,32.873,116.062)
N1: (49.223,31.609,116.125)
O4: (47.427,29.876,119.112)
O2: (49.352,33.511,117.428)
C6: (48.877,30.296,115.945)
C5: (48.261,29.662,116.923)
O3': (51.956,33.766,113.515)
Image (generated by PyMOL):