Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11629:11626
Extra
PDB:
ATOM 1 O3' U A1628 17.366 87.788 101.016 1.00101.90 O
ATOM 2 P C A1629 17.409 87.775 102.616 1.00 95.16 P
ATOM 3 OP1 C A1629 16.710 89.001 103.092 1.00 96.14 O
ATOM 4 OP2 C A1629 18.843 87.572 102.991 1.00 94.96 O
ATOM 5 O5' C A1629 16.546 86.476 102.980 1.00 94.55 O
ATOM 6 C5' C A1629 15.282 86.259 102.373 1.00 94.43 C
ATOM 7 C4' C A1629 14.845 84.815 102.466 1.00 93.62 C
ATOM 8 O4' C A1629 15.724 83.969 101.682 1.00 92.80 O
ATOM 9 C3' C A1629 14.887 84.179 103.842 1.00 93.57 C
ATOM 10 O3' C A1629 13.805 84.556 104.667 1.00 94.16 O
ATOM 11 C2' C A1629 14.899 82.697 103.508 1.00 92.60 C
ATOM 12 O2' C A1629 13.608 82.268 103.145 1.00 92.42 O
ATOM 13 C1' C A1629 15.764 82.672 102.255 1.00 92.16 C
ATOM 14 N1 C A1629 17.166 82.311 102.556 1.00 91.84 N
ATOM 15 C2 C A1629 17.465 81.032 103.045 1.00 91.17 C
ATOM 16 O2 C A1629 16.562 80.213 103.228 1.00 90.85 O
ATOM 17 N3 C A1629 18.744 80.705 103.322 1.00 90.91 N
ATOM 18 C4 C A1629 19.714 81.602 103.129 1.00 91.27 C
ATOM 19 N4 C A1629 20.974 81.251 103.399 1.00 91.00 N
ATOM 20 C5 C A1629 19.445 82.904 102.634 1.00 91.95 C
ATOM 21 C6 C A1629 18.172 83.211 102.364 1.00 92.21 C
ATOM 22 P U A1630 14.032 84.737 106.242 1.00 95.02 P
ATOM 23 OP1 U A1630 12.794 85.308 106.800 1.00 95.69 O
ATOM 24 OP2 U A1630 15.295 85.476 106.419 1.00 95.35 O
ATOM 25 O5' U A1630 14.209 83.252 106.745 1.00 94.23 O
TER
ATOM 1 O3' U B1625 26.944 78.502 102.424 1.00 81.56 O
ATOM 2 P U B1626 27.844 79.824 102.300 1.00 89.36 P
ATOM 3 OP1 U B1626 28.391 79.857 100.912 1.00 88.99 O
ATOM 4 OP2 U B1626 28.796 79.814 103.432 1.00 89.58 O
ATOM 5 O5' U B1626 26.768 80.986 102.507 1.00 90.16 O
ATOM 6 C5' U B1626 25.594 81.035 101.714 1.00 90.09 C
ATOM 7 C4' U B1626 24.545 81.917 102.333 1.00 90.85 C
ATOM 8 O4' U B1626 24.156 81.386 103.620 1.00 90.90 O
ATOM 9 C3' U B1626 24.970 83.338 102.623 1.00 91.72 C
ATOM 10 O3' U B1626 24.883 84.163 101.489 1.00 91.94 O
ATOM 11 C2' U B1626 24.044 83.754 103.763 1.00 92.35 C
ATOM 12 O2' U B1626 22.782 84.181 103.274 1.00 92.59 O
ATOM 13 C1' U B1626 23.857 82.433 104.509 1.00 91.77 C
ATOM 14 N1 U B1626 24.760 82.321 105.640 1.00 91.93 N
ATOM 15 C2 U B1626 24.266 82.600 106.891 1.00 92.48 C
ATOM 16 O2 U B1626 23.100 82.924 107.070 1.00 92.83 O
ATOM 17 N3 U B1626 25.220 82.458 107.889 1.00 92.60 N
ATOM 18 C4 U B1626 26.564 82.082 107.736 1.00 92.23 C
ATOM 19 O4 U B1626 27.336 81.982 108.695 1.00 92.39 O
ATOM 20 C5 U B1626 26.952 81.812 106.393 1.00 91.66 C
ATOM 21 C6 U B1626 26.056 81.935 105.420 1.00 91.54 C
ATOM 22 P A B1627 26.192 84.900 100.940 1.00 93.89 P
ATOM 23 OP1 A B1627 26.707 84.103 99.795 1.00 93.09 O
ATOM 24 OP2 A B1627 27.081 85.117 102.099 1.00 94.24 O
ATOM 25 O5' A B1627 25.597 86.301 100.436 1.00 94.67 O
TER
ATOM 2 P C A1629 17.409 87.775 102.616 1.00 95.16 P
ATOM 3 OP1 C A1629 16.710 89.001 103.092 1.00 96.14 O
ATOM 4 OP2 C A1629 18.843 87.572 102.991 1.00 94.96 O
ATOM 5 O5' C A1629 16.546 86.476 102.980 1.00 94.55 O
ATOM 6 C5' C A1629 15.282 86.259 102.373 1.00 94.43 C
ATOM 7 C4' C A1629 14.845 84.815 102.466 1.00 93.62 C
ATOM 8 O4' C A1629 15.724 83.969 101.682 1.00 92.80 O
ATOM 9 C3' C A1629 14.887 84.179 103.842 1.00 93.57 C
ATOM 10 O3' C A1629 13.805 84.556 104.667 1.00 94.16 O
ATOM 11 C2' C A1629 14.899 82.697 103.508 1.00 92.60 C
ATOM 12 O2' C A1629 13.608 82.268 103.145 1.00 92.42 O
ATOM 13 C1' C A1629 15.764 82.672 102.255 1.00 92.16 C
ATOM 14 N1 C A1629 17.166 82.311 102.556 1.00 91.84 N
ATOM 15 C2 C A1629 17.465 81.032 103.045 1.00 91.17 C
ATOM 16 O2 C A1629 16.562 80.213 103.228 1.00 90.85 O
ATOM 17 N3 C A1629 18.744 80.705 103.322 1.00 90.91 N
ATOM 18 C4 C A1629 19.714 81.602 103.129 1.00 91.27 C
ATOM 19 N4 C A1629 20.974 81.251 103.399 1.00 91.00 N
ATOM 20 C5 C A1629 19.445 82.904 102.634 1.00 91.95 C
ATOM 21 C6 C A1629 18.172 83.211 102.364 1.00 92.21 C
ATOM 22 P U A1630 14.032 84.737 106.242 1.00 95.02 P
ATOM 23 OP1 U A1630 12.794 85.308 106.800 1.00 95.69 O
ATOM 24 OP2 U A1630 15.295 85.476 106.419 1.00 95.35 O
ATOM 25 O5' U A1630 14.209 83.252 106.745 1.00 94.23 O
TER
ATOM 1 O3' U B1625 26.944 78.502 102.424 1.00 81.56 O
ATOM 2 P U B1626 27.844 79.824 102.300 1.00 89.36 P
ATOM 3 OP1 U B1626 28.391 79.857 100.912 1.00 88.99 O
ATOM 4 OP2 U B1626 28.796 79.814 103.432 1.00 89.58 O
ATOM 5 O5' U B1626 26.768 80.986 102.507 1.00 90.16 O
ATOM 6 C5' U B1626 25.594 81.035 101.714 1.00 90.09 C
ATOM 7 C4' U B1626 24.545 81.917 102.333 1.00 90.85 C
ATOM 8 O4' U B1626 24.156 81.386 103.620 1.00 90.90 O
ATOM 9 C3' U B1626 24.970 83.338 102.623 1.00 91.72 C
ATOM 10 O3' U B1626 24.883 84.163 101.489 1.00 91.94 O
ATOM 11 C2' U B1626 24.044 83.754 103.763 1.00 92.35 C
ATOM 12 O2' U B1626 22.782 84.181 103.274 1.00 92.59 O
ATOM 13 C1' U B1626 23.857 82.433 104.509 1.00 91.77 C
ATOM 14 N1 U B1626 24.760 82.321 105.640 1.00 91.93 N
ATOM 15 C2 U B1626 24.266 82.600 106.891 1.00 92.48 C
ATOM 16 O2 U B1626 23.100 82.924 107.070 1.00 92.83 O
ATOM 17 N3 U B1626 25.220 82.458 107.889 1.00 92.60 N
ATOM 18 C4 U B1626 26.564 82.082 107.736 1.00 92.23 C
ATOM 19 O4 U B1626 27.336 81.982 108.695 1.00 92.39 O
ATOM 20 C5 U B1626 26.952 81.812 106.393 1.00 91.66 C
ATOM 21 C6 U B1626 26.056 81.935 105.420 1.00 91.54 C
ATOM 22 P A B1627 26.192 84.900 100.940 1.00 93.89 P
ATOM 23 OP1 A B1627 26.707 84.103 99.795 1.00 93.09 O
ATOM 24 OP2 A B1627 27.081 85.117 102.099 1.00 94.24 O
ATOM 25 O5' A B1627 25.597 86.301 100.436 1.00 94.67 O
TER
Atoms:
C2: (17.465,81.032,103.045)
OP1: (16.710,89.001,103.092)
OP2: (18.843,87.572,102.991)
C4: (19.714,81.602,103.129)
O5': (16.546,86.476,102.980)
C3': (14.887,84.179,103.842)
C1': (15.764,82.672,102.255)
O4': (15.724,83.969,101.682)
C5': (15.282,86.259,102.373)
P: (17.409,87.775,102.616)
O2: (16.562,80.213,103.228)
C4': (14.845,84.815,102.466)
C2': (14.899,82.697,103.508)
O2': (13.608,82.268,103.145)
N1: (17.166,82.311,102.556)
N3: (18.744,80.705,103.322)
N4: (20.974,81.251,103.399)
C6: (18.172,83.211,102.364)
C5: (19.445,82.904,102.634)
O3': (13.805,84.556,104.667)
OP1: (16.710,89.001,103.092)
OP2: (18.843,87.572,102.991)
C4: (19.714,81.602,103.129)
O5': (16.546,86.476,102.980)
C3': (14.887,84.179,103.842)
C1': (15.764,82.672,102.255)
O4': (15.724,83.969,101.682)
C5': (15.282,86.259,102.373)
P: (17.409,87.775,102.616)
O2: (16.562,80.213,103.228)
C4': (14.845,84.815,102.466)
C2': (14.899,82.697,103.508)
O2': (13.608,82.268,103.145)
N1: (17.166,82.311,102.556)
N3: (18.744,80.705,103.322)
N4: (20.974,81.251,103.399)
C6: (18.172,83.211,102.364)
C5: (19.445,82.904,102.634)
O3': (13.805,84.556,104.667)
C4: (26.564,82.082,107.736)
N3: (25.220,82.458,107.889)
OP1: (28.391,79.857,100.912)
OP2: (28.796,79.814,103.432)
C2: (24.266,82.600,106.891)
C1': (23.857,82.433,104.509)
C3': (24.970,83.338,102.623)
O5': (26.768,80.986,102.507)
O4': (24.156,81.386,103.620)
C5': (25.594,81.035,101.714)
P: (27.844,79.824,102.300)
C4': (24.545,81.917,102.333)
C2': (24.044,83.754,103.763)
O2': (22.782,84.181,103.274)
N1: (24.760,82.321,105.640)
O4: (27.336,81.982,108.695)
O2: (23.100,82.924,107.070)
C6: (26.056,81.935,105.420)
C5: (26.952,81.812,106.393)
O3': (24.883,84.163,101.489)
N3: (25.220,82.458,107.889)
OP1: (28.391,79.857,100.912)
OP2: (28.796,79.814,103.432)
C2: (24.266,82.600,106.891)
C1': (23.857,82.433,104.509)
C3': (24.970,83.338,102.623)
O5': (26.768,80.986,102.507)
O4': (24.156,81.386,103.620)
C5': (25.594,81.035,101.714)
P: (27.844,79.824,102.300)
C4': (24.545,81.917,102.333)
C2': (24.044,83.754,103.763)
O2': (22.782,84.181,103.274)
N1: (24.760,82.321,105.640)
O4: (27.336,81.982,108.695)
O2: (23.100,82.924,107.070)
C6: (26.056,81.935,105.420)
C5: (26.952,81.812,106.393)
O3': (24.883,84.163,101.489)
Image (generated by PyMOL):