Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A615:A2375
Extra
PDB:
ATOM 1 O3' U A 614 45.908 102.215 93.327 1.00 28.56 O
ATOM 2 P G A 615 45.281 103.572 92.770 1.00 30.34 P
ATOM 3 OP1 G A 615 43.980 103.228 92.190 1.00 31.30 O
ATOM 4 OP2 G A 615 46.288 104.268 91.938 1.00 31.80 O
ATOM 5 O5' G A 615 45.011 104.424 94.080 1.00 29.24 O
ATOM 6 C5' G A 615 44.016 104.037 95.023 1.00 27.03 C
ATOM 7 C4' G A 615 44.338 104.650 96.342 1.00 27.76 C
ATOM 8 O4' G A 615 45.646 104.205 96.761 1.00 28.38 O
ATOM 9 C3' G A 615 44.469 106.152 96.251 1.00 26.96 C
ATOM 10 O3' G A 615 43.187 106.742 96.370 1.00 29.22 O
ATOM 11 C2' G A 615 45.373 106.468 97.424 1.00 26.82 C
ATOM 12 O2' G A 615 44.678 106.528 98.633 1.00 25.39 O
ATOM 13 C1' G A 615 46.306 105.261 97.420 1.00 28.64 C
ATOM 14 N9 G A 615 47.556 105.556 96.732 1.00 31.04 N
ATOM 15 C8 G A 615 47.818 105.552 95.383 1.00 31.09 C
ATOM 16 N7 G A 615 49.042 105.895 95.102 1.00 30.94 N
ATOM 17 C5 G A 615 49.612 106.132 96.337 1.00 30.66 C
ATOM 18 C6 G A 615 50.902 106.521 96.673 1.00 30.59 C
ATOM 19 O6 G A 615 51.854 106.732 95.928 1.00 31.13 O
ATOM 20 N1 G A 615 51.052 106.652 98.047 1.00 30.64 N
ATOM 21 C2 G A 615 50.074 106.426 98.975 1.00 30.72 C
ATOM 22 N2 G A 615 50.405 106.617 100.271 1.00 31.50 N
ATOM 23 N3 G A 615 48.864 106.047 98.666 1.00 29.70 N
ATOM 24 C4 G A 615 48.703 105.923 97.345 1.00 29.68 C
ATOM 25 P A A 616 42.583 107.591 95.161 1.00 27.83 P
ATOM 26 OP1 A A 616 41.126 107.547 95.327 1.00 26.59 O
ATOM 27 OP2 A A 616 43.191 107.147 93.896 1.00 27.82 O
ATOM 28 O5' A A 616 43.065 109.061 95.499 1.00 28.99 O
TER
ATOM 1 O3' C B2374 54.161 106.585 99.376 1.00 35.04 O
ATOM 2 P C B2375 54.678 107.785 98.448 1.00 35.77 P
ATOM 3 OP1 C B2375 53.794 107.817 97.281 1.00 34.72 O
ATOM 4 OP2 C B2375 56.129 107.567 98.259 1.00 35.78 O
ATOM 5 O5' C B2375 54.452 109.094 99.318 1.00 36.20 O
ATOM 6 C5' C B2375 53.136 109.590 99.618 1.00 38.31 C
ATOM 7 C4' C B2375 53.239 111.008 100.128 1.00 40.10 C
ATOM 8 O4' C B2375 53.984 111.022 101.374 1.00 41.66 O
ATOM 9 C3' C B2375 54.060 111.922 99.238 1.00 40.43 C
ATOM 10 O3' C B2375 53.292 112.410 98.158 1.00 41.25 O
ATOM 11 C2' C B2375 54.455 113.016 100.205 1.00 39.99 C
ATOM 12 O2' C B2375 53.322 113.819 100.485 1.00 39.78 O
ATOM 13 C1' C B2375 54.799 112.179 101.435 1.00 40.45 C
ATOM 14 N1 C B2375 56.220 111.755 101.501 1.00 41.25 N
ATOM 15 C2 C B2375 57.166 112.666 101.986 1.00 43.26 C
ATOM 16 O2 C B2375 56.789 113.810 102.297 1.00 44.63 O
ATOM 17 N3 C B2375 58.467 112.279 102.104 1.00 43.32 N
ATOM 18 C4 C B2375 58.832 111.043 101.746 1.00 42.68 C
ATOM 19 N4 C B2375 60.118 110.696 101.894 1.00 42.78 N
ATOM 20 C5 C B2375 57.893 110.105 101.222 1.00 42.04 C
ATOM 21 C6 C B2375 56.614 110.499 101.115 1.00 41.77 C
ATOM 22 P U B2376 53.925 112.422 96.696 1.00 40.22 P
ATOM 23 OP1 U B2376 52.771 112.545 95.786 1.00 42.43 O
ATOM 24 OP2 U B2376 54.797 111.234 96.616 1.00 42.26 O
ATOM 25 O5' U B2376 54.829 113.739 96.660 1.00 41.40 O
TER
ATOM 2 P G A 615 45.281 103.572 92.770 1.00 30.34 P
ATOM 3 OP1 G A 615 43.980 103.228 92.190 1.00 31.30 O
ATOM 4 OP2 G A 615 46.288 104.268 91.938 1.00 31.80 O
ATOM 5 O5' G A 615 45.011 104.424 94.080 1.00 29.24 O
ATOM 6 C5' G A 615 44.016 104.037 95.023 1.00 27.03 C
ATOM 7 C4' G A 615 44.338 104.650 96.342 1.00 27.76 C
ATOM 8 O4' G A 615 45.646 104.205 96.761 1.00 28.38 O
ATOM 9 C3' G A 615 44.469 106.152 96.251 1.00 26.96 C
ATOM 10 O3' G A 615 43.187 106.742 96.370 1.00 29.22 O
ATOM 11 C2' G A 615 45.373 106.468 97.424 1.00 26.82 C
ATOM 12 O2' G A 615 44.678 106.528 98.633 1.00 25.39 O
ATOM 13 C1' G A 615 46.306 105.261 97.420 1.00 28.64 C
ATOM 14 N9 G A 615 47.556 105.556 96.732 1.00 31.04 N
ATOM 15 C8 G A 615 47.818 105.552 95.383 1.00 31.09 C
ATOM 16 N7 G A 615 49.042 105.895 95.102 1.00 30.94 N
ATOM 17 C5 G A 615 49.612 106.132 96.337 1.00 30.66 C
ATOM 18 C6 G A 615 50.902 106.521 96.673 1.00 30.59 C
ATOM 19 O6 G A 615 51.854 106.732 95.928 1.00 31.13 O
ATOM 20 N1 G A 615 51.052 106.652 98.047 1.00 30.64 N
ATOM 21 C2 G A 615 50.074 106.426 98.975 1.00 30.72 C
ATOM 22 N2 G A 615 50.405 106.617 100.271 1.00 31.50 N
ATOM 23 N3 G A 615 48.864 106.047 98.666 1.00 29.70 N
ATOM 24 C4 G A 615 48.703 105.923 97.345 1.00 29.68 C
ATOM 25 P A A 616 42.583 107.591 95.161 1.00 27.83 P
ATOM 26 OP1 A A 616 41.126 107.547 95.327 1.00 26.59 O
ATOM 27 OP2 A A 616 43.191 107.147 93.896 1.00 27.82 O
ATOM 28 O5' A A 616 43.065 109.061 95.499 1.00 28.99 O
TER
ATOM 1 O3' C B2374 54.161 106.585 99.376 1.00 35.04 O
ATOM 2 P C B2375 54.678 107.785 98.448 1.00 35.77 P
ATOM 3 OP1 C B2375 53.794 107.817 97.281 1.00 34.72 O
ATOM 4 OP2 C B2375 56.129 107.567 98.259 1.00 35.78 O
ATOM 5 O5' C B2375 54.452 109.094 99.318 1.00 36.20 O
ATOM 6 C5' C B2375 53.136 109.590 99.618 1.00 38.31 C
ATOM 7 C4' C B2375 53.239 111.008 100.128 1.00 40.10 C
ATOM 8 O4' C B2375 53.984 111.022 101.374 1.00 41.66 O
ATOM 9 C3' C B2375 54.060 111.922 99.238 1.00 40.43 C
ATOM 10 O3' C B2375 53.292 112.410 98.158 1.00 41.25 O
ATOM 11 C2' C B2375 54.455 113.016 100.205 1.00 39.99 C
ATOM 12 O2' C B2375 53.322 113.819 100.485 1.00 39.78 O
ATOM 13 C1' C B2375 54.799 112.179 101.435 1.00 40.45 C
ATOM 14 N1 C B2375 56.220 111.755 101.501 1.00 41.25 N
ATOM 15 C2 C B2375 57.166 112.666 101.986 1.00 43.26 C
ATOM 16 O2 C B2375 56.789 113.810 102.297 1.00 44.63 O
ATOM 17 N3 C B2375 58.467 112.279 102.104 1.00 43.32 N
ATOM 18 C4 C B2375 58.832 111.043 101.746 1.00 42.68 C
ATOM 19 N4 C B2375 60.118 110.696 101.894 1.00 42.78 N
ATOM 20 C5 C B2375 57.893 110.105 101.222 1.00 42.04 C
ATOM 21 C6 C B2375 56.614 110.499 101.115 1.00 41.77 C
ATOM 22 P U B2376 53.925 112.422 96.696 1.00 40.22 P
ATOM 23 OP1 U B2376 52.771 112.545 95.786 1.00 42.43 O
ATOM 24 OP2 U B2376 54.797 111.234 96.616 1.00 42.26 O
ATOM 25 O5' U B2376 54.829 113.739 96.660 1.00 41.40 O
TER
Atoms:
OP1: (43.980,103.228,92.190)
OP2: (46.288,104.268,91.938)
C3': (44.469,106.152,96.251)
C1': (46.306,105.261,97.420)
C5': (44.016,104.037,95.023)
O6: (51.854,106.732,95.928)
O4': (45.646,104.205,96.761)
C8: (47.818,105.552,95.383)
C2: (50.074,106.426,98.975)
C6: (50.902,106.521,96.673)
C5: (49.612,106.132,96.337)
C4: (48.703,105.923,97.345)
P: (45.281,103.572,92.770)
C4': (44.338,104.650,96.342)
C2': (45.373,106.468,97.424)
O2': (44.678,106.528,98.633)
N1: (51.052,106.652,98.047)
N2: (50.405,106.617,100.271)
N3: (48.864,106.047,98.666)
N7: (49.042,105.895,95.102)
N9: (47.556,105.556,96.732)
O5': (45.011,104.424,94.080)
O3': (43.187,106.742,96.370)
OP2: (46.288,104.268,91.938)
C3': (44.469,106.152,96.251)
C1': (46.306,105.261,97.420)
C5': (44.016,104.037,95.023)
O6: (51.854,106.732,95.928)
O4': (45.646,104.205,96.761)
C8: (47.818,105.552,95.383)
C2: (50.074,106.426,98.975)
C6: (50.902,106.521,96.673)
C5: (49.612,106.132,96.337)
C4: (48.703,105.923,97.345)
P: (45.281,103.572,92.770)
C4': (44.338,104.650,96.342)
C2': (45.373,106.468,97.424)
O2': (44.678,106.528,98.633)
N1: (51.052,106.652,98.047)
N2: (50.405,106.617,100.271)
N3: (48.864,106.047,98.666)
N7: (49.042,105.895,95.102)
N9: (47.556,105.556,96.732)
O5': (45.011,104.424,94.080)
O3': (43.187,106.742,96.370)
C2: (57.166,112.666,101.986)
OP1: (53.794,107.817,97.281)
OP2: (56.129,107.567,98.259)
C4: (58.832,111.043,101.746)
O5': (54.452,109.094,99.318)
C3': (54.060,111.922,99.238)
C1': (54.799,112.179,101.435)
O4': (53.984,111.022,101.374)
C5': (53.136,109.590,99.618)
P: (54.678,107.785,98.448)
O2: (56.789,113.810,102.297)
C4': (53.239,111.008,100.128)
C2': (54.455,113.016,100.205)
O2': (53.322,113.819,100.485)
N1: (56.220,111.755,101.501)
N3: (58.467,112.279,102.104)
N4: (60.118,110.696,101.894)
C6: (56.614,110.499,101.115)
C5: (57.893,110.105,101.222)
O3': (53.292,112.410,98.158)
OP1: (53.794,107.817,97.281)
OP2: (56.129,107.567,98.259)
C4: (58.832,111.043,101.746)
O5': (54.452,109.094,99.318)
C3': (54.060,111.922,99.238)
C1': (54.799,112.179,101.435)
O4': (53.984,111.022,101.374)
C5': (53.136,109.590,99.618)
P: (54.678,107.785,98.448)
O2: (56.789,113.810,102.297)
C4': (53.239,111.008,100.128)
C2': (54.455,113.016,100.205)
O2': (53.322,113.819,100.485)
N1: (56.220,111.755,101.501)
N3: (58.467,112.279,102.104)
N4: (60.118,110.696,101.894)
C6: (56.614,110.499,101.115)
C5: (57.893,110.105,101.222)
O3': (53.292,112.410,98.158)
Image (generated by PyMOL):