ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01046:01028

Extra

PDB:
ATOM 1 O3' A A1045 22.989 91.709 99.754 1.00 43.68 O
ATOM 2 P G A1046 23.027 90.211 99.148 1.00 43.12 P
ATOM 3 OP1 G A1046 21.619 89.766 99.239 1.00 44.58 O
ATOM 4 OP2 G A1046 24.097 89.365 99.730 1.00 41.16 O
ATOM 5 O5' G A1046 23.364 90.419 97.600 1.00 44.10 O
ATOM 6 C5' G A1046 24.692 90.781 97.176 1.00 42.79 C
ATOM 7 C4' G A1046 24.717 92.208 96.657 1.00 43.83 C
ATOM 8 O4' G A1046 26.079 92.713 96.693 1.00 43.46 O
ATOM 9 C3' G A1046 24.237 92.421 95.225 1.00 41.56 C
ATOM 10 O3' G A1046 23.794 93.761 95.079 1.00 40.99 O
ATOM 11 C2' G A1046 25.540 92.279 94.443 1.00 40.76 C
ATOM 12 O2' G A1046 25.532 92.896 93.169 1.00 40.89 O
ATOM 13 C1' G A1046 26.520 92.987 95.381 1.00 39.37 C
ATOM 14 N9 G A1046 27.898 92.523 95.290 1.00 37.87 N
ATOM 15 C8 G A1046 28.341 91.278 94.919 1.00 35.52 C
ATOM 16 N7 G A1046 29.639 91.172 94.945 1.00 36.79 N
ATOM 17 C5 G A1046 30.076 92.422 95.359 1.00 36.35 C
ATOM 18 C6 G A1046 31.382 92.909 95.572 1.00 35.42 C
ATOM 19 O6 G A1046 32.455 92.315 95.433 1.00 37.88 O
ATOM 20 N1 G A1046 31.370 94.233 95.989 1.00 32.27 N
ATOM 21 C2 G A1046 30.247 94.989 96.174 1.00 34.80 C
ATOM 22 N2 G A1046 30.434 96.247 96.574 1.00 35.55 N
ATOM 23 N3 G A1046 29.025 94.547 95.980 1.00 36.09 N
ATOM 24 C4 G A1046 29.013 93.263 95.576 1.00 36.22 C
ATOM 25 P A A1047 22.409 94.237 95.728 1.00 44.94 P
ATOM 26 OP1 A A1047 22.622 94.381 97.180 1.00 43.78 O
ATOM 27 OP2 A A1047 21.330 93.345 95.226 1.00 50.05 O
ATOM 28 O5' A A1047 22.217 95.682 95.094 1.00 44.02 O
TER

ATOM 1 O3' C B1027 35.294 93.661 97.193 1.00 35.28 O
ATOM 2 P C B1028 35.160 94.647 95.943 1.00 34.81 P
ATOM 3 OP1 C B1028 33.921 95.431 96.146 1.00 32.55 O
ATOM 4 OP2 C B1028 35.338 93.844 94.710 1.00 29.41 O
ATOM 5 O5' C B1028 36.395 95.644 96.095 1.00 35.37 O
ATOM 6 C5' C B1028 36.417 96.632 97.138 1.00 38.39 C
ATOM 7 C4' C B1028 37.709 97.415 97.096 1.00 38.97 C
ATOM 8 O4' C B1028 38.829 96.543 97.407 1.00 37.91 O
ATOM 9 C3' C B1028 38.075 97.996 95.739 1.00 37.53 C
ATOM 10 O3' C B1028 37.411 99.215 95.469 1.00 37.74 O
ATOM 11 C2' C B1028 39.569 98.204 95.876 1.00 37.23 C
ATOM 12 O2' C B1028 39.834 99.346 96.660 1.00 38.40 O
ATOM 13 C1' C B1028 39.965 96.946 96.645 1.00 37.10 C
ATOM 14 N1 C B1028 40.349 95.834 95.755 1.00 35.30 N
ATOM 15 C2 C B1028 41.657 95.776 95.272 1.00 33.19 C
ATOM 16 O2 C B1028 42.428 96.713 95.515 1.00 36.91 O
ATOM 17 N3 C B1028 42.045 94.709 94.542 1.00 34.93 N
ATOM 18 C4 C B1028 41.167 93.735 94.264 1.00 35.78 C
ATOM 19 N4 C B1028 41.596 92.672 93.565 1.00 31.03 N
ATOM 20 C5 C B1028 39.816 93.800 94.694 1.00 34.97 C
ATOM 21 C6 C B1028 39.451 94.857 95.429 1.00 34.84 C
ATOM 22 P A B1029 37.057 99.593 93.953 1.00 37.34 P
ATOM 23 OP1 A B1029 36.441 100.943 93.983 1.00 36.20 O
ATOM 24 OP2 A B1029 36.312 98.459 93.363 1.00 35.55 O
ATOM 25 O5' A B1029 38.466 99.619 93.202 1.00 36.34 O
TER

Atoms:
OP1: (21.619,89.766,99.239)
OP2: (24.097,89.365,99.730)
C3': (24.237,92.421,95.225)
C1': (26.520,92.987,95.381)
C5': (24.692,90.781,97.176)
O6: (32.455,92.315,95.433)
O4': (26.079,92.713,96.693)
C8: (28.341,91.278,94.919)
C2: (30.247,94.989,96.174)
C6: (31.382,92.909,95.572)
C5: (30.076,92.422,95.359)
C4: (29.013,93.263,95.576)
P: (23.027,90.211,99.148)
C4': (24.717,92.208,96.657)
C2': (25.540,92.279,94.443)
O2': (25.532,92.896,93.169)
N1: (31.370,94.233,95.989)
N2: (30.434,96.247,96.574)
N3: (29.025,94.547,95.980)
N7: (29.639,91.172,94.945)
N9: (27.898,92.523,95.290)
O5': (23.364,90.419,97.600)
O3': (23.794,93.761,95.079)
C2: (41.657,95.776,95.272)
OP1: (33.921,95.431,96.146)
OP2: (35.338,93.844,94.710)
C4: (41.167,93.735,94.264)
O5': (36.395,95.644,96.095)
C3': (38.075,97.996,95.739)
C1': (39.965,96.946,96.645)
O4': (38.829,96.543,97.407)
C5': (36.417,96.632,97.138)
P: (35.160,94.647,95.943)
O2: (42.428,96.713,95.515)
C4': (37.709,97.415,97.096)
C2': (39.569,98.204,95.876)
O2': (39.834,99.346,96.660)
N1: (40.349,95.834,95.755)
N3: (42.045,94.709,94.542)
N4: (41.596,92.672,93.565)
C6: (39.451,94.857,95.429)
C5: (39.816,93.800,94.694)
O3': (37.411,99.215,95.469)
Image (generated by PyMOL):
PyMOL image
show in jmol