ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:0615:02375

Extra

PDB:
ATOM 1 O3' U A 614 45.792 101.168 92.592 1.00 34.02 O
ATOM 2 P G A 615 45.174 102.585 92.143 1.00 35.84 P
ATOM 3 OP1 G A 615 43.798 102.330 91.639 1.00 37.89 O
ATOM 4 OP2 G A 615 46.151 103.255 91.267 1.00 36.03 O
ATOM 5 O5' G A 615 45.023 103.418 93.494 1.00 35.02 O
ATOM 6 C5' G A 615 44.032 103.066 94.476 1.00 34.54 C
ATOM 7 C4' G A 615 44.338 103.738 95.792 1.00 34.06 C
ATOM 8 O4' G A 615 45.633 103.284 96.270 1.00 36.82 O
ATOM 9 C3' G A 615 44.465 105.254 95.759 1.00 33.90 C
ATOM 10 O3' G A 615 43.190 105.875 95.889 1.00 35.43 O
ATOM 11 C2' G A 615 45.300 105.518 97.006 1.00 34.51 C
ATOM 12 O2' G A 615 44.524 105.438 98.187 1.00 35.37 O
ATOM 13 C1' G A 615 46.272 104.336 96.981 1.00 35.08 C
ATOM 14 N9 G A 615 47.539 104.643 96.320 1.00 37.18 N
ATOM 15 C8 G A 615 47.804 104.615 94.970 1.00 35.14 C
ATOM 16 N7 G A 615 49.037 104.929 94.685 1.00 35.54 N
ATOM 17 C5 G A 615 49.618 105.191 95.915 1.00 38.63 C
ATOM 18 C6 G A 615 50.945 105.590 96.243 1.00 38.56 C
ATOM 19 O6 G A 615 51.890 105.814 95.488 1.00 40.26 O
ATOM 20 N1 G A 615 51.112 105.720 97.613 1.00 38.21 N
ATOM 21 C2 G A 615 50.132 105.509 98.548 1.00 39.58 C
ATOM 22 N2 G A 615 50.491 105.661 99.826 1.00 40.84 N
ATOM 23 N3 G A 615 48.890 105.165 98.255 1.00 38.44 N
ATOM 24 C4 G A 615 48.707 105.016 96.933 1.00 36.43 C
TER

ATOM 1 O3' C B2374 54.190 105.665 98.973 1.00 39.85 O
ATOM 2 P C B2375 54.752 106.914 98.119 1.00 39.98 P
ATOM 3 OP1 C B2375 53.995 107.005 96.847 1.00 40.51 O
ATOM 4 OP2 C B2375 56.241 106.825 98.080 1.00 39.99 O
ATOM 5 O5' C B2375 54.344 108.186 98.976 1.00 38.17 O
ATOM 6 C5' C B2375 52.979 108.622 99.053 1.00 39.45 C
ATOM 7 C4' C B2375 52.925 110.026 99.602 1.00 42.53 C
ATOM 8 O4' C B2375 53.543 110.039 100.918 1.00 45.00 O
ATOM 9 C3' C B2375 53.729 111.058 98.824 1.00 43.66 C
ATOM 10 O3' C B2375 53.011 111.543 97.695 1.00 41.74 O
ATOM 11 C2' C B2375 53.972 112.134 99.875 1.00 44.74 C
ATOM 12 O2' C B2375 52.840 112.945 100.101 1.00 42.44 O
ATOM 13 C1' C B2375 54.198 111.282 101.125 1.00 44.85 C
ATOM 14 N1 C B2375 55.620 111.050 101.457 1.00 45.09 N
ATOM 15 C2 C B2375 56.370 112.109 102.017 1.00 47.79 C
ATOM 16 O2 C B2375 55.823 113.214 102.205 1.00 50.00 O
ATOM 17 N3 C B2375 57.669 111.902 102.336 1.00 46.40 N
ATOM 18 C4 C B2375 58.226 110.714 102.116 1.00 45.56 C
ATOM 19 N4 C B2375 59.505 110.557 102.456 1.00 48.73 N
ATOM 20 C5 C B2375 57.497 109.630 101.540 1.00 46.43 C
ATOM 21 C6 C B2375 56.210 109.839 101.232 1.00 45.39 C
ATOM 22 P U B2376 53.687 111.481 96.236 1.00 41.55 P
ATOM 23 OP1 U B2376 52.621 111.706 95.237 1.00 42.40 O
ATOM 24 OP2 U B2376 54.521 110.258 96.150 1.00 41.55 O
ATOM 25 O5' U B2376 54.620 112.768 96.203 1.00 44.55 O
TER

Atoms:
OP1: (43.798,102.330,91.639)
OP2: (46.151,103.255,91.267)
C3': (44.465,105.254,95.759)
C1': (46.272,104.336,96.981)
C5': (44.032,103.066,94.476)
O6: (51.890,105.814,95.488)
O4': (45.633,103.284,96.270)
C8: (47.804,104.615,94.970)
C2: (50.132,105.509,98.548)
C6: (50.945,105.590,96.243)
C5: (49.618,105.191,95.915)
C4: (48.707,105.016,96.933)
P: (45.174,102.585,92.143)
C4': (44.338,103.738,95.792)
C2': (45.300,105.518,97.006)
O2': (44.524,105.438,98.187)
N1: (51.112,105.720,97.613)
N2: (50.491,105.661,99.826)
N3: (48.890,105.165,98.255)
N7: (49.037,104.929,94.685)
N9: (47.539,104.643,96.320)
O5': (45.023,103.418,93.494)
O3': (43.190,105.875,95.889)
C2: (56.370,112.109,102.017)
OP1: (53.995,107.005,96.847)
OP2: (56.241,106.825,98.080)
C4: (58.226,110.714,102.116)
O5': (54.344,108.186,98.976)
C3': (53.729,111.058,98.824)
C1': (54.198,111.282,101.125)
O4': (53.543,110.039,100.918)
C5': (52.979,108.622,99.053)
P: (54.752,106.914,98.119)
O2: (55.823,113.214,102.205)
C4': (52.925,110.026,99.602)
C2': (53.972,112.134,99.875)
O2': (52.840,112.945,100.101)
N1: (55.620,111.050,101.457)
N3: (57.669,111.902,102.336)
N4: (59.505,110.557,102.456)
C6: (56.210,109.839,101.232)
C5: (57.497,109.630,101.540)
O3': (53.011,111.543,97.695)
Image (generated by PyMOL):
PyMOL image
show in jmol