Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y39:D5:D51
Extra
PDB:
ATOM 1 O3' G A 4 132.823 78.780 -4.484 1.00 55.98 O
ATOM 2 P G A 5 132.681 77.384 -3.714 1.00 55.71 P
ATOM 3 OP1 G A 5 133.581 77.381 -2.530 1.00 55.74 O
ATOM 4 OP2 G A 5 132.802 76.306 -4.727 1.00 56.57 O
ATOM 5 O5' G A 5 131.162 77.389 -3.224 1.00 56.70 O
ATOM 6 C5' G A 5 130.754 78.093 -2.053 1.00 55.04 C
ATOM 7 C4' G A 5 129.273 77.916 -1.835 1.00 54.97 C
ATOM 8 O4' G A 5 128.555 78.502 -2.954 1.00 55.74 O
ATOM 9 C3' G A 5 128.789 76.478 -1.820 1.00 54.83 C
ATOM 10 O3' G A 5 128.947 75.884 -0.545 1.00 54.54 O
ATOM 11 C2' G A 5 127.321 76.633 -2.184 1.00 55.51 C
ATOM 12 O2' G A 5 126.523 77.076 -1.106 1.00 56.08 O
ATOM 13 C1' G A 5 127.401 77.723 -3.249 1.00 56.23 C
ATOM 14 N9 G A 5 127.551 77.133 -4.577 1.00 57.36 N
ATOM 15 C8 G A 5 128.713 76.957 -5.290 1.00 57.58 C
ATOM 16 N7 G A 5 128.530 76.330 -6.422 1.00 58.53 N
ATOM 17 C5 G A 5 127.164 76.085 -6.463 1.00 58.50 C
ATOM 18 C6 G A 5 126.368 75.421 -7.446 1.00 59.43 C
ATOM 19 O6 G A 5 126.732 74.871 -8.501 1.00 59.21 O
ATOM 20 N1 G A 5 125.016 75.434 -7.099 1.00 59.81 N
ATOM 21 C2 G A 5 124.499 76.004 -5.958 1.00 58.39 C
ATOM 22 N2 G A 5 123.173 75.950 -5.818 1.00 58.55 N
ATOM 23 N3 G A 5 125.230 76.594 -5.030 1.00 58.01 N
ATOM 24 C4 G A 5 126.542 76.601 -5.344 1.00 57.90 C
ATOM 25 P A A 6 129.621 74.434 -0.431 1.00 53.04 P
ATOM 26 OP1 A A 6 129.455 73.758 -1.739 1.00 54.07 O
ATOM 27 OP2 A A 6 129.104 73.777 0.799 1.00 52.53 O
ATOM 28 O5' A A 6 131.158 74.798 -0.248 1.00 52.81 O
TER
ATOM 1 O3' U B 50 122.155 72.758 -10.725 1.00 69.10 O
ATOM 2 P C B 51 121.993 74.228 -10.096 1.00 69.33 P
ATOM 3 OP1 C B 51 121.491 75.075 -11.208 1.00 70.27 O
ATOM 4 OP2 C B 51 123.242 74.615 -9.378 1.00 67.87 O
ATOM 5 O5' C B 51 120.835 74.076 -9.011 1.00 68.25 O
ATOM 6 C5' C B 51 119.493 73.799 -9.399 1.00 68.29 C
ATOM 7 C4' C B 51 118.584 73.840 -8.190 1.00 68.94 C
ATOM 8 O4' C B 51 118.989 72.811 -7.242 1.00 69.06 O
ATOM 9 C3' C B 51 118.621 75.129 -7.384 1.00 68.90 C
ATOM 10 O3' C B 51 117.735 76.099 -7.932 1.00 69.51 O
ATOM 11 C2' C B 51 118.158 74.667 -6.007 1.00 69.16 C
ATOM 12 O2' C B 51 116.751 74.569 -5.893 1.00 68.77 O
ATOM 13 C1' C B 51 118.799 73.278 -5.916 1.00 68.51 C
ATOM 14 N1 C B 51 120.103 73.290 -5.221 1.00 67.97 N
ATOM 15 C2 C B 51 120.117 73.441 -3.829 1.00 67.72 C
ATOM 16 O2 C B 51 119.040 73.532 -3.226 1.00 67.85 O
ATOM 17 N3 C B 51 121.302 73.481 -3.177 1.00 67.05 N
ATOM 18 C4 C B 51 122.444 73.377 -3.860 1.00 66.12 C
ATOM 19 N4 C B 51 123.585 73.447 -3.172 1.00 65.57 N
ATOM 20 C5 C B 51 122.463 73.203 -5.277 1.00 65.84 C
ATOM 21 C6 C B 51 121.281 73.166 -5.912 1.00 67.20 C
ATOM 22 P A B 52 118.071 77.670 -7.779 1.00 71.12 P
ATOM 23 OP1 A B 52 117.074 78.404 -8.614 1.00 71.40 O
ATOM 24 OP2 A B 52 119.526 77.876 -8.034 1.00 69.84 O
ATOM 25 O5' A B 52 117.788 77.985 -6.240 1.00 68.39 O
TER
ATOM 2 P G A 5 132.681 77.384 -3.714 1.00 55.71 P
ATOM 3 OP1 G A 5 133.581 77.381 -2.530 1.00 55.74 O
ATOM 4 OP2 G A 5 132.802 76.306 -4.727 1.00 56.57 O
ATOM 5 O5' G A 5 131.162 77.389 -3.224 1.00 56.70 O
ATOM 6 C5' G A 5 130.754 78.093 -2.053 1.00 55.04 C
ATOM 7 C4' G A 5 129.273 77.916 -1.835 1.00 54.97 C
ATOM 8 O4' G A 5 128.555 78.502 -2.954 1.00 55.74 O
ATOM 9 C3' G A 5 128.789 76.478 -1.820 1.00 54.83 C
ATOM 10 O3' G A 5 128.947 75.884 -0.545 1.00 54.54 O
ATOM 11 C2' G A 5 127.321 76.633 -2.184 1.00 55.51 C
ATOM 12 O2' G A 5 126.523 77.076 -1.106 1.00 56.08 O
ATOM 13 C1' G A 5 127.401 77.723 -3.249 1.00 56.23 C
ATOM 14 N9 G A 5 127.551 77.133 -4.577 1.00 57.36 N
ATOM 15 C8 G A 5 128.713 76.957 -5.290 1.00 57.58 C
ATOM 16 N7 G A 5 128.530 76.330 -6.422 1.00 58.53 N
ATOM 17 C5 G A 5 127.164 76.085 -6.463 1.00 58.50 C
ATOM 18 C6 G A 5 126.368 75.421 -7.446 1.00 59.43 C
ATOM 19 O6 G A 5 126.732 74.871 -8.501 1.00 59.21 O
ATOM 20 N1 G A 5 125.016 75.434 -7.099 1.00 59.81 N
ATOM 21 C2 G A 5 124.499 76.004 -5.958 1.00 58.39 C
ATOM 22 N2 G A 5 123.173 75.950 -5.818 1.00 58.55 N
ATOM 23 N3 G A 5 125.230 76.594 -5.030 1.00 58.01 N
ATOM 24 C4 G A 5 126.542 76.601 -5.344 1.00 57.90 C
ATOM 25 P A A 6 129.621 74.434 -0.431 1.00 53.04 P
ATOM 26 OP1 A A 6 129.455 73.758 -1.739 1.00 54.07 O
ATOM 27 OP2 A A 6 129.104 73.777 0.799 1.00 52.53 O
ATOM 28 O5' A A 6 131.158 74.798 -0.248 1.00 52.81 O
TER
ATOM 1 O3' U B 50 122.155 72.758 -10.725 1.00 69.10 O
ATOM 2 P C B 51 121.993 74.228 -10.096 1.00 69.33 P
ATOM 3 OP1 C B 51 121.491 75.075 -11.208 1.00 70.27 O
ATOM 4 OP2 C B 51 123.242 74.615 -9.378 1.00 67.87 O
ATOM 5 O5' C B 51 120.835 74.076 -9.011 1.00 68.25 O
ATOM 6 C5' C B 51 119.493 73.799 -9.399 1.00 68.29 C
ATOM 7 C4' C B 51 118.584 73.840 -8.190 1.00 68.94 C
ATOM 8 O4' C B 51 118.989 72.811 -7.242 1.00 69.06 O
ATOM 9 C3' C B 51 118.621 75.129 -7.384 1.00 68.90 C
ATOM 10 O3' C B 51 117.735 76.099 -7.932 1.00 69.51 O
ATOM 11 C2' C B 51 118.158 74.667 -6.007 1.00 69.16 C
ATOM 12 O2' C B 51 116.751 74.569 -5.893 1.00 68.77 O
ATOM 13 C1' C B 51 118.799 73.278 -5.916 1.00 68.51 C
ATOM 14 N1 C B 51 120.103 73.290 -5.221 1.00 67.97 N
ATOM 15 C2 C B 51 120.117 73.441 -3.829 1.00 67.72 C
ATOM 16 O2 C B 51 119.040 73.532 -3.226 1.00 67.85 O
ATOM 17 N3 C B 51 121.302 73.481 -3.177 1.00 67.05 N
ATOM 18 C4 C B 51 122.444 73.377 -3.860 1.00 66.12 C
ATOM 19 N4 C B 51 123.585 73.447 -3.172 1.00 65.57 N
ATOM 20 C5 C B 51 122.463 73.203 -5.277 1.00 65.84 C
ATOM 21 C6 C B 51 121.281 73.166 -5.912 1.00 67.20 C
ATOM 22 P A B 52 118.071 77.670 -7.779 1.00 71.12 P
ATOM 23 OP1 A B 52 117.074 78.404 -8.614 1.00 71.40 O
ATOM 24 OP2 A B 52 119.526 77.876 -8.034 1.00 69.84 O
ATOM 25 O5' A B 52 117.788 77.985 -6.240 1.00 68.39 O
TER
Atoms:
OP1: (133.581,77.381,-2.530)
OP2: (132.802,76.306,-4.727)
C3': (128.789,76.478,-1.820)
C1': (127.401,77.723,-3.249)
C5': (130.754,78.093,-2.053)
O6: (126.732,74.871,-8.501)
O4': (128.555,78.502,-2.954)
C8: (128.713,76.957,-5.290)
C2: (124.499,76.004,-5.958)
C6: (126.368,75.421,-7.446)
C5: (127.164,76.085,-6.463)
C4: (126.542,76.601,-5.344)
P: (132.681,77.384,-3.714)
C4': (129.273,77.916,-1.835)
C2': (127.321,76.633,-2.184)
O2': (126.523,77.076,-1.106)
N1: (125.016,75.434,-7.099)
N2: (123.173,75.950,-5.818)
N3: (125.230,76.594,-5.030)
N7: (128.530,76.330,-6.422)
N9: (127.551,77.133,-4.577)
O5': (131.162,77.389,-3.224)
O3': (128.947,75.884,-0.545)
OP2: (132.802,76.306,-4.727)
C3': (128.789,76.478,-1.820)
C1': (127.401,77.723,-3.249)
C5': (130.754,78.093,-2.053)
O6: (126.732,74.871,-8.501)
O4': (128.555,78.502,-2.954)
C8: (128.713,76.957,-5.290)
C2: (124.499,76.004,-5.958)
C6: (126.368,75.421,-7.446)
C5: (127.164,76.085,-6.463)
C4: (126.542,76.601,-5.344)
P: (132.681,77.384,-3.714)
C4': (129.273,77.916,-1.835)
C2': (127.321,76.633,-2.184)
O2': (126.523,77.076,-1.106)
N1: (125.016,75.434,-7.099)
N2: (123.173,75.950,-5.818)
N3: (125.230,76.594,-5.030)
N7: (128.530,76.330,-6.422)
N9: (127.551,77.133,-4.577)
O5': (131.162,77.389,-3.224)
O3': (128.947,75.884,-0.545)
C2: (120.117,73.441,-3.829)
OP1: (121.491,75.075,-11.208)
OP2: (123.242,74.615,-9.378)
C4: (122.444,73.377,-3.860)
O5': (120.835,74.076,-9.011)
C3': (118.621,75.129,-7.384)
C1': (118.799,73.278,-5.916)
O4': (118.989,72.811,-7.242)
C5': (119.493,73.799,-9.399)
P: (121.993,74.228,-10.096)
O2: (119.040,73.532,-3.226)
C4': (118.584,73.840,-8.190)
C2': (118.158,74.667,-6.007)
O2': (116.751,74.569,-5.893)
N1: (120.103,73.290,-5.221)
N3: (121.302,73.481,-3.177)
N4: (123.585,73.447,-3.172)
C6: (121.281,73.166,-5.912)
C5: (122.463,73.203,-5.277)
O3': (117.735,76.099,-7.932)
OP1: (121.491,75.075,-11.208)
OP2: (123.242,74.615,-9.378)
C4: (122.444,73.377,-3.860)
O5': (120.835,74.076,-9.011)
C3': (118.621,75.129,-7.384)
C1': (118.799,73.278,-5.916)
O4': (118.989,72.811,-7.242)
C5': (119.493,73.799,-9.399)
P: (121.993,74.228,-10.096)
O2: (119.040,73.532,-3.226)
C4': (118.584,73.840,-8.190)
C2': (118.158,74.667,-6.007)
O2': (116.751,74.569,-5.893)
N1: (120.103,73.290,-5.221)
N3: (121.302,73.481,-3.177)
N4: (123.585,73.447,-3.172)
C6: (121.281,73.166,-5.912)
C5: (122.463,73.203,-5.277)
O3': (117.735,76.099,-7.932)
Image (generated by PyMOL):