Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0615:02375
Extra
PDB:
ATOM 1 O3' U A 614 45.844 101.443 92.628 1.00 23.15 O
ATOM 2 P G A 615 45.229 102.857 92.163 1.00 25.40 P
ATOM 3 OP1 G A 615 43.885 102.574 91.611 1.00 24.12 O
ATOM 4 OP2 G A 615 46.225 103.560 91.325 1.00 24.58 O
ATOM 5 O5' G A 615 45.019 103.683 93.509 1.00 23.06 O
ATOM 6 C5' G A 615 44.027 103.291 94.467 1.00 25.18 C
ATOM 7 C4' G A 615 44.297 103.948 95.796 1.00 24.47 C
ATOM 8 O4' G A 615 45.578 103.498 96.317 1.00 27.12 O
ATOM 9 C3' G A 615 44.408 105.464 95.762 1.00 23.94 C
ATOM 10 O3' G A 615 43.113 106.052 95.850 1.00 24.86 O
ATOM 11 C2' G A 615 45.221 105.738 97.022 1.00 23.95 C
ATOM 12 O2' G A 615 44.433 105.633 98.186 1.00 24.31 O
ATOM 13 C1' G A 615 46.205 104.563 97.018 1.00 25.41 C
ATOM 14 N9 G A 615 47.476 104.873 96.360 1.00 27.90 N
ATOM 15 C8 G A 615 47.729 104.875 95.008 1.00 26.68 C
ATOM 16 N7 G A 615 48.958 105.192 94.717 1.00 26.89 N
ATOM 17 C5 G A 615 49.556 105.423 95.946 1.00 27.23 C
ATOM 18 C6 G A 615 50.887 105.802 96.262 1.00 27.60 C
ATOM 19 O6 G A 615 51.823 106.026 95.495 1.00 25.09 O
ATOM 20 N1 G A 615 51.076 105.907 97.635 1.00 27.64 N
ATOM 21 C2 G A 615 50.109 105.683 98.583 1.00 28.08 C
ATOM 22 N2 G A 615 50.484 105.832 99.859 1.00 26.95 N
ATOM 23 N3 G A 615 48.865 105.337 98.300 1.00 27.85 N
ATOM 24 C4 G A 615 48.659 105.224 96.972 1.00 26.89 C
TER
ATOM 1 O3' C B2374 54.131 105.941 98.900 1.00 27.82 O
ATOM 2 P C B2375 54.679 107.134 97.955 1.00 28.01 P
ATOM 3 OP1 C B2375 53.848 107.212 96.730 1.00 28.22 O
ATOM 4 OP2 C B2375 56.153 106.988 97.832 1.00 28.98 O
ATOM 5 O5' C B2375 54.398 108.458 98.784 1.00 27.19 O
ATOM 6 C5' C B2375 53.073 108.979 98.932 1.00 27.10 C
ATOM 7 C4' C B2375 53.145 110.365 99.513 1.00 29.13 C
ATOM 8 O4' C B2375 53.829 110.307 100.797 1.00 32.02 O
ATOM 9 C3' C B2375 53.987 111.350 98.718 1.00 29.20 C
ATOM 10 O3' C B2375 53.257 111.881 97.625 1.00 29.82 O
ATOM 11 C2' C B2375 54.334 112.388 99.777 1.00 30.22 C
ATOM 12 O2' C B2375 53.247 113.231 100.104 1.00 29.47 O
ATOM 13 C1' C B2375 54.601 111.488 100.983 1.00 30.09 C
ATOM 14 N1 C B2375 56.024 111.116 101.126 1.00 30.02 N
ATOM 15 C2 C B2375 56.908 112.030 101.724 1.00 30.06 C
ATOM 16 O2 C B2375 56.478 113.130 102.092 1.00 33.27 O
ATOM 17 N3 C B2375 58.206 111.693 101.877 1.00 30.14 N
ATOM 18 C4 C B2375 58.640 110.507 101.449 1.00 30.32 C
ATOM 19 N4 C B2375 59.929 110.220 101.611 1.00 34.10 N
ATOM 20 C5 C B2375 57.770 109.563 100.829 1.00 30.46 C
ATOM 21 C6 C B2375 56.484 109.905 100.689 1.00 29.79 C
ATOM 22 P U B2376 53.830 111.723 96.132 1.00 29.05 P
ATOM 23 OP1 U B2376 52.684 111.832 95.196 1.00 28.39 O
ATOM 24 OP2 U B2376 54.715 110.530 96.068 1.00 29.71 O
ATOM 25 O5' U B2376 54.717 113.031 95.945 1.00 31.67 O
TER
ATOM 2 P G A 615 45.229 102.857 92.163 1.00 25.40 P
ATOM 3 OP1 G A 615 43.885 102.574 91.611 1.00 24.12 O
ATOM 4 OP2 G A 615 46.225 103.560 91.325 1.00 24.58 O
ATOM 5 O5' G A 615 45.019 103.683 93.509 1.00 23.06 O
ATOM 6 C5' G A 615 44.027 103.291 94.467 1.00 25.18 C
ATOM 7 C4' G A 615 44.297 103.948 95.796 1.00 24.47 C
ATOM 8 O4' G A 615 45.578 103.498 96.317 1.00 27.12 O
ATOM 9 C3' G A 615 44.408 105.464 95.762 1.00 23.94 C
ATOM 10 O3' G A 615 43.113 106.052 95.850 1.00 24.86 O
ATOM 11 C2' G A 615 45.221 105.738 97.022 1.00 23.95 C
ATOM 12 O2' G A 615 44.433 105.633 98.186 1.00 24.31 O
ATOM 13 C1' G A 615 46.205 104.563 97.018 1.00 25.41 C
ATOM 14 N9 G A 615 47.476 104.873 96.360 1.00 27.90 N
ATOM 15 C8 G A 615 47.729 104.875 95.008 1.00 26.68 C
ATOM 16 N7 G A 615 48.958 105.192 94.717 1.00 26.89 N
ATOM 17 C5 G A 615 49.556 105.423 95.946 1.00 27.23 C
ATOM 18 C6 G A 615 50.887 105.802 96.262 1.00 27.60 C
ATOM 19 O6 G A 615 51.823 106.026 95.495 1.00 25.09 O
ATOM 20 N1 G A 615 51.076 105.907 97.635 1.00 27.64 N
ATOM 21 C2 G A 615 50.109 105.683 98.583 1.00 28.08 C
ATOM 22 N2 G A 615 50.484 105.832 99.859 1.00 26.95 N
ATOM 23 N3 G A 615 48.865 105.337 98.300 1.00 27.85 N
ATOM 24 C4 G A 615 48.659 105.224 96.972 1.00 26.89 C
TER
ATOM 1 O3' C B2374 54.131 105.941 98.900 1.00 27.82 O
ATOM 2 P C B2375 54.679 107.134 97.955 1.00 28.01 P
ATOM 3 OP1 C B2375 53.848 107.212 96.730 1.00 28.22 O
ATOM 4 OP2 C B2375 56.153 106.988 97.832 1.00 28.98 O
ATOM 5 O5' C B2375 54.398 108.458 98.784 1.00 27.19 O
ATOM 6 C5' C B2375 53.073 108.979 98.932 1.00 27.10 C
ATOM 7 C4' C B2375 53.145 110.365 99.513 1.00 29.13 C
ATOM 8 O4' C B2375 53.829 110.307 100.797 1.00 32.02 O
ATOM 9 C3' C B2375 53.987 111.350 98.718 1.00 29.20 C
ATOM 10 O3' C B2375 53.257 111.881 97.625 1.00 29.82 O
ATOM 11 C2' C B2375 54.334 112.388 99.777 1.00 30.22 C
ATOM 12 O2' C B2375 53.247 113.231 100.104 1.00 29.47 O
ATOM 13 C1' C B2375 54.601 111.488 100.983 1.00 30.09 C
ATOM 14 N1 C B2375 56.024 111.116 101.126 1.00 30.02 N
ATOM 15 C2 C B2375 56.908 112.030 101.724 1.00 30.06 C
ATOM 16 O2 C B2375 56.478 113.130 102.092 1.00 33.27 O
ATOM 17 N3 C B2375 58.206 111.693 101.877 1.00 30.14 N
ATOM 18 C4 C B2375 58.640 110.507 101.449 1.00 30.32 C
ATOM 19 N4 C B2375 59.929 110.220 101.611 1.00 34.10 N
ATOM 20 C5 C B2375 57.770 109.563 100.829 1.00 30.46 C
ATOM 21 C6 C B2375 56.484 109.905 100.689 1.00 29.79 C
ATOM 22 P U B2376 53.830 111.723 96.132 1.00 29.05 P
ATOM 23 OP1 U B2376 52.684 111.832 95.196 1.00 28.39 O
ATOM 24 OP2 U B2376 54.715 110.530 96.068 1.00 29.71 O
ATOM 25 O5' U B2376 54.717 113.031 95.945 1.00 31.67 O
TER
Atoms:
OP1: (43.885,102.574,91.611)
OP2: (46.225,103.560,91.325)
C3': (44.408,105.464,95.762)
C1': (46.205,104.563,97.018)
C5': (44.027,103.291,94.467)
O6: (51.823,106.026,95.495)
O4': (45.578,103.498,96.317)
C8: (47.729,104.875,95.008)
C2: (50.109,105.683,98.583)
C6: (50.887,105.802,96.262)
C5: (49.556,105.423,95.946)
C4: (48.659,105.224,96.972)
P: (45.229,102.857,92.163)
C4': (44.297,103.948,95.796)
C2': (45.221,105.738,97.022)
O2': (44.433,105.633,98.186)
N1: (51.076,105.907,97.635)
N2: (50.484,105.832,99.859)
N3: (48.865,105.337,98.300)
N7: (48.958,105.192,94.717)
N9: (47.476,104.873,96.360)
O5': (45.019,103.683,93.509)
O3': (43.113,106.052,95.850)
OP2: (46.225,103.560,91.325)
C3': (44.408,105.464,95.762)
C1': (46.205,104.563,97.018)
C5': (44.027,103.291,94.467)
O6: (51.823,106.026,95.495)
O4': (45.578,103.498,96.317)
C8: (47.729,104.875,95.008)
C2: (50.109,105.683,98.583)
C6: (50.887,105.802,96.262)
C5: (49.556,105.423,95.946)
C4: (48.659,105.224,96.972)
P: (45.229,102.857,92.163)
C4': (44.297,103.948,95.796)
C2': (45.221,105.738,97.022)
O2': (44.433,105.633,98.186)
N1: (51.076,105.907,97.635)
N2: (50.484,105.832,99.859)
N3: (48.865,105.337,98.300)
N7: (48.958,105.192,94.717)
N9: (47.476,104.873,96.360)
O5': (45.019,103.683,93.509)
O3': (43.113,106.052,95.850)
C2: (56.908,112.030,101.724)
OP1: (53.848,107.212,96.730)
OP2: (56.153,106.988,97.832)
C4: (58.640,110.507,101.449)
O5': (54.398,108.458,98.784)
C3': (53.987,111.350,98.718)
C1': (54.601,111.488,100.983)
O4': (53.829,110.307,100.797)
C5': (53.073,108.979,98.932)
P: (54.679,107.134,97.955)
O2: (56.478,113.130,102.092)
C4': (53.145,110.365,99.513)
C2': (54.334,112.388,99.777)
O2': (53.247,113.231,100.104)
N1: (56.024,111.116,101.126)
N3: (58.206,111.693,101.877)
N4: (59.929,110.220,101.611)
C6: (56.484,109.905,100.689)
C5: (57.770,109.563,100.829)
O3': (53.257,111.881,97.625)
OP1: (53.848,107.212,96.730)
OP2: (56.153,106.988,97.832)
C4: (58.640,110.507,101.449)
O5': (54.398,108.458,98.784)
C3': (53.987,111.350,98.718)
C1': (54.601,111.488,100.983)
O4': (53.829,110.307,100.797)
C5': (53.073,108.979,98.932)
P: (54.679,107.134,97.955)
O2: (56.478,113.130,102.092)
C4': (53.145,110.365,99.513)
C2': (54.334,112.388,99.777)
O2': (53.247,113.231,100.104)
N1: (56.024,111.116,101.126)
N3: (58.206,111.693,101.877)
N4: (59.929,110.220,101.611)
C6: (56.484,109.905,100.689)
C5: (57.770,109.563,100.829)
O3': (53.257,111.881,97.625)
Image (generated by PyMOL):