Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01046:01028
Extra
PDB:
ATOM 1 O3' A A1045 23.021 92.853 99.895 1.00 35.51 O
ATOM 2 P G A1046 23.085 91.376 99.257 1.00 39.83 P
ATOM 3 OP1 G A1046 21.699 90.855 99.255 1.00 40.24 O
ATOM 4 OP2 G A1046 24.160 90.586 99.903 1.00 38.08 O
ATOM 5 O5' G A1046 23.504 91.631 97.741 1.00 38.38 O
ATOM 6 C5' G A1046 24.833 92.064 97.412 1.00 36.83 C
ATOM 7 C4' G A1046 24.799 93.430 96.761 1.00 36.44 C
ATOM 8 O4' G A1046 26.135 93.987 96.734 1.00 34.87 O
ATOM 9 C3' G A1046 24.309 93.472 95.323 1.00 35.37 C
ATOM 10 O3' G A1046 23.815 94.773 95.035 1.00 36.92 O
ATOM 11 C2' G A1046 25.603 93.273 94.549 1.00 33.83 C
ATOM 12 O2' G A1046 25.525 93.815 93.247 1.00 37.50 O
ATOM 13 C1' G A1046 26.586 94.076 95.403 1.00 32.56 C
ATOM 14 N9 G A1046 27.973 93.620 95.383 1.00 30.21 N
ATOM 15 C8 G A1046 28.436 92.366 95.080 1.00 29.08 C
ATOM 16 N7 G A1046 29.733 92.270 95.145 1.00 28.98 N
ATOM 17 C5 G A1046 30.155 93.537 95.515 1.00 30.06 C
ATOM 18 C6 G A1046 31.460 94.043 95.728 1.00 30.23 C
ATOM 19 O6 G A1046 32.540 93.455 95.608 1.00 30.12 O
ATOM 20 N1 G A1046 31.435 95.384 96.101 1.00 29.07 N
ATOM 21 C2 G A1046 30.302 96.143 96.232 1.00 29.33 C
ATOM 22 N2 G A1046 30.481 97.422 96.583 1.00 29.09 N
ATOM 23 N3 G A1046 29.081 95.686 96.029 1.00 29.66 N
ATOM 24 C4 G A1046 29.082 94.382 95.675 1.00 30.22 C
ATOM 25 P A A1047 22.453 95.296 95.712 1.00 38.49 P
ATOM 26 OP1 A A1047 22.690 95.440 97.158 1.00 33.68 O
ATOM 27 OP2 A A1047 21.340 94.443 95.229 1.00 39.85 O
ATOM 28 O5' A A1047 22.313 96.750 95.086 1.00 37.90 O
TER
ATOM 1 O3' C B1027 35.308 94.830 97.281 1.00 25.04 O
ATOM 2 P C B1028 35.247 95.834 96.046 1.00 26.83 P
ATOM 3 OP1 C B1028 34.031 96.670 96.212 1.00 25.54 O
ATOM 4 OP2 C B1028 35.434 95.036 94.804 1.00 22.95 O
ATOM 5 O5' C B1028 36.529 96.751 96.255 1.00 27.40 O
ATOM 6 C5' C B1028 36.563 97.759 97.282 1.00 26.70 C
ATOM 7 C4' C B1028 37.827 98.574 97.167 1.00 27.76 C
ATOM 8 O4' C B1028 38.985 97.756 97.493 1.00 28.08 O
ATOM 9 C3' C B1028 38.136 99.105 95.774 1.00 26.13 C
ATOM 10 O3' C B1028 37.433 100.305 95.503 1.00 26.22 O
ATOM 11 C2' C B1028 39.629 99.360 95.860 1.00 25.80 C
ATOM 12 O2' C B1028 39.883 100.538 96.598 1.00 24.95 O
ATOM 13 C1' C B1028 40.082 98.153 96.681 1.00 26.20 C
ATOM 14 N1 C B1028 40.479 97.009 95.844 1.00 26.64 N
ATOM 15 C2 C B1028 41.790 96.955 95.353 1.00 26.59 C
ATOM 16 O2 C B1028 42.560 97.904 95.589 1.00 27.63 O
ATOM 17 N3 C B1028 42.182 95.876 94.636 1.00 26.34 N
ATOM 18 C4 C B1028 41.318 94.883 94.396 1.00 26.39 C
ATOM 19 N4 C B1028 41.750 93.820 93.707 1.00 21.68 N
ATOM 20 C5 C B1028 39.974 94.931 94.856 1.00 25.70 C
ATOM 21 C6 C B1028 39.598 96.002 95.565 1.00 24.70 C
ATOM 22 P A B1029 37.142 100.727 93.986 1.00 27.32 P
ATOM 23 OP1 A B1029 36.649 102.120 94.019 1.00 24.83 O
ATOM 24 OP2 A B1029 36.308 99.670 93.371 1.00 27.12 O
ATOM 25 O5' A B1029 38.578 100.680 93.287 1.00 30.48 O
TER
ATOM 2 P G A1046 23.085 91.376 99.257 1.00 39.83 P
ATOM 3 OP1 G A1046 21.699 90.855 99.255 1.00 40.24 O
ATOM 4 OP2 G A1046 24.160 90.586 99.903 1.00 38.08 O
ATOM 5 O5' G A1046 23.504 91.631 97.741 1.00 38.38 O
ATOM 6 C5' G A1046 24.833 92.064 97.412 1.00 36.83 C
ATOM 7 C4' G A1046 24.799 93.430 96.761 1.00 36.44 C
ATOM 8 O4' G A1046 26.135 93.987 96.734 1.00 34.87 O
ATOM 9 C3' G A1046 24.309 93.472 95.323 1.00 35.37 C
ATOM 10 O3' G A1046 23.815 94.773 95.035 1.00 36.92 O
ATOM 11 C2' G A1046 25.603 93.273 94.549 1.00 33.83 C
ATOM 12 O2' G A1046 25.525 93.815 93.247 1.00 37.50 O
ATOM 13 C1' G A1046 26.586 94.076 95.403 1.00 32.56 C
ATOM 14 N9 G A1046 27.973 93.620 95.383 1.00 30.21 N
ATOM 15 C8 G A1046 28.436 92.366 95.080 1.00 29.08 C
ATOM 16 N7 G A1046 29.733 92.270 95.145 1.00 28.98 N
ATOM 17 C5 G A1046 30.155 93.537 95.515 1.00 30.06 C
ATOM 18 C6 G A1046 31.460 94.043 95.728 1.00 30.23 C
ATOM 19 O6 G A1046 32.540 93.455 95.608 1.00 30.12 O
ATOM 20 N1 G A1046 31.435 95.384 96.101 1.00 29.07 N
ATOM 21 C2 G A1046 30.302 96.143 96.232 1.00 29.33 C
ATOM 22 N2 G A1046 30.481 97.422 96.583 1.00 29.09 N
ATOM 23 N3 G A1046 29.081 95.686 96.029 1.00 29.66 N
ATOM 24 C4 G A1046 29.082 94.382 95.675 1.00 30.22 C
ATOM 25 P A A1047 22.453 95.296 95.712 1.00 38.49 P
ATOM 26 OP1 A A1047 22.690 95.440 97.158 1.00 33.68 O
ATOM 27 OP2 A A1047 21.340 94.443 95.229 1.00 39.85 O
ATOM 28 O5' A A1047 22.313 96.750 95.086 1.00 37.90 O
TER
ATOM 1 O3' C B1027 35.308 94.830 97.281 1.00 25.04 O
ATOM 2 P C B1028 35.247 95.834 96.046 1.00 26.83 P
ATOM 3 OP1 C B1028 34.031 96.670 96.212 1.00 25.54 O
ATOM 4 OP2 C B1028 35.434 95.036 94.804 1.00 22.95 O
ATOM 5 O5' C B1028 36.529 96.751 96.255 1.00 27.40 O
ATOM 6 C5' C B1028 36.563 97.759 97.282 1.00 26.70 C
ATOM 7 C4' C B1028 37.827 98.574 97.167 1.00 27.76 C
ATOM 8 O4' C B1028 38.985 97.756 97.493 1.00 28.08 O
ATOM 9 C3' C B1028 38.136 99.105 95.774 1.00 26.13 C
ATOM 10 O3' C B1028 37.433 100.305 95.503 1.00 26.22 O
ATOM 11 C2' C B1028 39.629 99.360 95.860 1.00 25.80 C
ATOM 12 O2' C B1028 39.883 100.538 96.598 1.00 24.95 O
ATOM 13 C1' C B1028 40.082 98.153 96.681 1.00 26.20 C
ATOM 14 N1 C B1028 40.479 97.009 95.844 1.00 26.64 N
ATOM 15 C2 C B1028 41.790 96.955 95.353 1.00 26.59 C
ATOM 16 O2 C B1028 42.560 97.904 95.589 1.00 27.63 O
ATOM 17 N3 C B1028 42.182 95.876 94.636 1.00 26.34 N
ATOM 18 C4 C B1028 41.318 94.883 94.396 1.00 26.39 C
ATOM 19 N4 C B1028 41.750 93.820 93.707 1.00 21.68 N
ATOM 20 C5 C B1028 39.974 94.931 94.856 1.00 25.70 C
ATOM 21 C6 C B1028 39.598 96.002 95.565 1.00 24.70 C
ATOM 22 P A B1029 37.142 100.727 93.986 1.00 27.32 P
ATOM 23 OP1 A B1029 36.649 102.120 94.019 1.00 24.83 O
ATOM 24 OP2 A B1029 36.308 99.670 93.371 1.00 27.12 O
ATOM 25 O5' A B1029 38.578 100.680 93.287 1.00 30.48 O
TER
Atoms:
OP1: (21.699,90.855,99.255)
OP2: (24.160,90.586,99.903)
C3': (24.309,93.472,95.323)
C1': (26.586,94.076,95.403)
C5': (24.833,92.064,97.412)
O6: (32.540,93.455,95.608)
O4': (26.135,93.987,96.734)
C8: (28.436,92.366,95.080)
C2: (30.302,96.143,96.232)
C6: (31.460,94.043,95.728)
C5: (30.155,93.537,95.515)
C4: (29.082,94.382,95.675)
P: (23.085,91.376,99.257)
C4': (24.799,93.430,96.761)
C2': (25.603,93.273,94.549)
O2': (25.525,93.815,93.247)
N1: (31.435,95.384,96.101)
N2: (30.481,97.422,96.583)
N3: (29.081,95.686,96.029)
N7: (29.733,92.270,95.145)
N9: (27.973,93.620,95.383)
O5': (23.504,91.631,97.741)
O3': (23.815,94.773,95.035)
OP2: (24.160,90.586,99.903)
C3': (24.309,93.472,95.323)
C1': (26.586,94.076,95.403)
C5': (24.833,92.064,97.412)
O6: (32.540,93.455,95.608)
O4': (26.135,93.987,96.734)
C8: (28.436,92.366,95.080)
C2: (30.302,96.143,96.232)
C6: (31.460,94.043,95.728)
C5: (30.155,93.537,95.515)
C4: (29.082,94.382,95.675)
P: (23.085,91.376,99.257)
C4': (24.799,93.430,96.761)
C2': (25.603,93.273,94.549)
O2': (25.525,93.815,93.247)
N1: (31.435,95.384,96.101)
N2: (30.481,97.422,96.583)
N3: (29.081,95.686,96.029)
N7: (29.733,92.270,95.145)
N9: (27.973,93.620,95.383)
O5': (23.504,91.631,97.741)
O3': (23.815,94.773,95.035)
C2: (41.790,96.955,95.353)
OP1: (34.031,96.670,96.212)
OP2: (35.434,95.036,94.804)
C4: (41.318,94.883,94.396)
O5': (36.529,96.751,96.255)
C3': (38.136,99.105,95.774)
C1': (40.082,98.153,96.681)
O4': (38.985,97.756,97.493)
C5': (36.563,97.759,97.282)
P: (35.247,95.834,96.046)
O2: (42.560,97.904,95.589)
C4': (37.827,98.574,97.167)
C2': (39.629,99.360,95.860)
O2': (39.883,100.538,96.598)
N1: (40.479,97.009,95.844)
N3: (42.182,95.876,94.636)
N4: (41.750,93.820,93.707)
C6: (39.598,96.002,95.565)
C5: (39.974,94.931,94.856)
O3': (37.433,100.305,95.503)
OP1: (34.031,96.670,96.212)
OP2: (35.434,95.036,94.804)
C4: (41.318,94.883,94.396)
O5': (36.529,96.751,96.255)
C3': (38.136,99.105,95.774)
C1': (40.082,98.153,96.681)
O4': (38.985,97.756,97.493)
C5': (36.563,97.759,97.282)
P: (35.247,95.834,96.046)
O2: (42.560,97.904,95.589)
C4': (37.827,98.574,97.167)
C2': (39.629,99.360,95.860)
O2': (39.883,100.538,96.598)
N1: (40.479,97.009,95.844)
N3: (42.182,95.876,94.636)
N4: (41.750,93.820,93.707)
C6: (39.598,96.002,95.565)
C5: (39.974,94.931,94.856)
O3': (37.433,100.305,95.503)
Image (generated by PyMOL):