Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0615:02375
Extra
PDB:
ATOM 1 O3' U A 614 45.777 102.128 92.625 1.00 25.08 O
ATOM 2 P G A 615 45.176 103.546 92.170 1.00 29.29 P
ATOM 3 OP1 G A 615 43.857 103.220 91.574 1.00 27.30 O
ATOM 4 OP2 G A 615 46.179 104.260 91.357 1.00 28.39 O
ATOM 5 O5' G A 615 44.970 104.364 93.525 1.00 24.54 O
ATOM 6 C5' G A 615 43.988 103.960 94.486 1.00 26.05 C
ATOM 7 C4' G A 615 44.232 104.644 95.812 1.00 28.71 C
ATOM 8 O4' G A 615 45.503 104.217 96.363 1.00 30.28 O
ATOM 9 C3' G A 615 44.314 106.160 95.785 1.00 28.99 C
ATOM 10 O3' G A 615 43.002 106.723 95.853 1.00 29.16 O
ATOM 11 C2' G A 615 45.113 106.448 97.053 1.00 29.00 C
ATOM 12 O2' G A 615 44.324 106.321 98.216 1.00 31.14 O
ATOM 13 C1' G A 615 46.114 105.292 97.054 1.00 28.88 C
ATOM 14 N9 G A 615 47.387 105.595 96.395 1.00 32.15 N
ATOM 15 C8 G A 615 47.635 105.603 95.041 1.00 30.03 C
ATOM 16 N7 G A 615 48.866 105.911 94.748 1.00 28.58 N
ATOM 17 C5 G A 615 49.472 106.122 95.976 1.00 29.32 C
ATOM 18 C6 G A 615 50.802 106.486 96.284 1.00 30.22 C
ATOM 19 O6 G A 615 51.734 106.709 95.510 1.00 30.27 O
ATOM 20 N1 G A 615 51.000 106.588 97.656 1.00 30.67 N
ATOM 21 C2 G A 615 50.035 106.376 98.609 1.00 30.57 C
ATOM 22 N2 G A 615 50.415 106.540 99.883 1.00 27.99 N
ATOM 23 N3 G A 615 48.788 106.033 98.332 1.00 30.19 N
ATOM 24 C4 G A 615 48.577 105.927 97.005 1.00 29.53 C
TER
ATOM 1 O3' C B2374 54.096 106.575 98.902 1.00 36.28 O
ATOM 2 P C B2375 54.607 107.774 97.949 1.00 39.07 P
ATOM 3 OP1 C B2375 53.725 107.831 96.760 1.00 39.47 O
ATOM 4 OP2 C B2375 56.075 107.648 97.771 1.00 38.57 O
ATOM 5 O5' C B2375 54.342 109.103 98.780 1.00 39.39 O
ATOM 6 C5' C B2375 53.009 109.604 98.982 1.00 37.71 C
ATOM 7 C4' C B2375 53.066 111.003 99.540 1.00 37.48 C
ATOM 8 O4' C B2375 53.750 110.988 100.824 1.00 39.68 O
ATOM 9 C3' C B2375 53.876 111.992 98.720 1.00 37.86 C
ATOM 10 O3' C B2375 53.121 112.479 97.620 1.00 37.97 O
ATOM 11 C2' C B2375 54.204 113.054 99.761 1.00 39.19 C
ATOM 12 O2' C B2375 53.089 113.863 100.089 1.00 38.47 O
ATOM 13 C1' C B2375 54.511 112.179 100.978 1.00 38.86 C
ATOM 14 N1 C B2375 55.943 111.820 101.113 1.00 40.48 N
ATOM 15 C2 C B2375 56.841 112.770 101.647 1.00 40.96 C
ATOM 16 O2 C B2375 56.423 113.903 101.941 1.00 41.95 O
ATOM 17 N3 C B2375 58.143 112.429 101.814 1.00 39.78 N
ATOM 18 C4 C B2375 58.566 111.214 101.456 1.00 39.49 C
ATOM 19 N4 C B2375 59.851 110.917 101.655 1.00 41.99 N
ATOM 20 C5 C B2375 57.689 110.246 100.884 1.00 38.86 C
ATOM 21 C6 C B2375 56.400 110.584 100.736 1.00 39.96 C
ATOM 22 P U B2376 53.737 112.414 96.136 1.00 38.03 P
ATOM 23 OP1 U B2376 52.614 112.569 95.177 1.00 38.62 O
ATOM 24 OP2 U B2376 54.617 111.223 96.033 1.00 39.33 O
ATOM 25 O5' U B2376 54.628 113.732 96.053 1.00 38.71 O
TER
ATOM 2 P G A 615 45.176 103.546 92.170 1.00 29.29 P
ATOM 3 OP1 G A 615 43.857 103.220 91.574 1.00 27.30 O
ATOM 4 OP2 G A 615 46.179 104.260 91.357 1.00 28.39 O
ATOM 5 O5' G A 615 44.970 104.364 93.525 1.00 24.54 O
ATOM 6 C5' G A 615 43.988 103.960 94.486 1.00 26.05 C
ATOM 7 C4' G A 615 44.232 104.644 95.812 1.00 28.71 C
ATOM 8 O4' G A 615 45.503 104.217 96.363 1.00 30.28 O
ATOM 9 C3' G A 615 44.314 106.160 95.785 1.00 28.99 C
ATOM 10 O3' G A 615 43.002 106.723 95.853 1.00 29.16 O
ATOM 11 C2' G A 615 45.113 106.448 97.053 1.00 29.00 C
ATOM 12 O2' G A 615 44.324 106.321 98.216 1.00 31.14 O
ATOM 13 C1' G A 615 46.114 105.292 97.054 1.00 28.88 C
ATOM 14 N9 G A 615 47.387 105.595 96.395 1.00 32.15 N
ATOM 15 C8 G A 615 47.635 105.603 95.041 1.00 30.03 C
ATOM 16 N7 G A 615 48.866 105.911 94.748 1.00 28.58 N
ATOM 17 C5 G A 615 49.472 106.122 95.976 1.00 29.32 C
ATOM 18 C6 G A 615 50.802 106.486 96.284 1.00 30.22 C
ATOM 19 O6 G A 615 51.734 106.709 95.510 1.00 30.27 O
ATOM 20 N1 G A 615 51.000 106.588 97.656 1.00 30.67 N
ATOM 21 C2 G A 615 50.035 106.376 98.609 1.00 30.57 C
ATOM 22 N2 G A 615 50.415 106.540 99.883 1.00 27.99 N
ATOM 23 N3 G A 615 48.788 106.033 98.332 1.00 30.19 N
ATOM 24 C4 G A 615 48.577 105.927 97.005 1.00 29.53 C
TER
ATOM 1 O3' C B2374 54.096 106.575 98.902 1.00 36.28 O
ATOM 2 P C B2375 54.607 107.774 97.949 1.00 39.07 P
ATOM 3 OP1 C B2375 53.725 107.831 96.760 1.00 39.47 O
ATOM 4 OP2 C B2375 56.075 107.648 97.771 1.00 38.57 O
ATOM 5 O5' C B2375 54.342 109.103 98.780 1.00 39.39 O
ATOM 6 C5' C B2375 53.009 109.604 98.982 1.00 37.71 C
ATOM 7 C4' C B2375 53.066 111.003 99.540 1.00 37.48 C
ATOM 8 O4' C B2375 53.750 110.988 100.824 1.00 39.68 O
ATOM 9 C3' C B2375 53.876 111.992 98.720 1.00 37.86 C
ATOM 10 O3' C B2375 53.121 112.479 97.620 1.00 37.97 O
ATOM 11 C2' C B2375 54.204 113.054 99.761 1.00 39.19 C
ATOM 12 O2' C B2375 53.089 113.863 100.089 1.00 38.47 O
ATOM 13 C1' C B2375 54.511 112.179 100.978 1.00 38.86 C
ATOM 14 N1 C B2375 55.943 111.820 101.113 1.00 40.48 N
ATOM 15 C2 C B2375 56.841 112.770 101.647 1.00 40.96 C
ATOM 16 O2 C B2375 56.423 113.903 101.941 1.00 41.95 O
ATOM 17 N3 C B2375 58.143 112.429 101.814 1.00 39.78 N
ATOM 18 C4 C B2375 58.566 111.214 101.456 1.00 39.49 C
ATOM 19 N4 C B2375 59.851 110.917 101.655 1.00 41.99 N
ATOM 20 C5 C B2375 57.689 110.246 100.884 1.00 38.86 C
ATOM 21 C6 C B2375 56.400 110.584 100.736 1.00 39.96 C
ATOM 22 P U B2376 53.737 112.414 96.136 1.00 38.03 P
ATOM 23 OP1 U B2376 52.614 112.569 95.177 1.00 38.62 O
ATOM 24 OP2 U B2376 54.617 111.223 96.033 1.00 39.33 O
ATOM 25 O5' U B2376 54.628 113.732 96.053 1.00 38.71 O
TER
Atoms:
OP1: (43.857,103.220,91.574)
OP2: (46.179,104.260,91.357)
C3': (44.314,106.160,95.785)
C1': (46.114,105.292,97.054)
C5': (43.988,103.960,94.486)
O6: (51.734,106.709,95.510)
O4': (45.503,104.217,96.363)
C8: (47.635,105.603,95.041)
C2: (50.035,106.376,98.609)
C6: (50.802,106.486,96.284)
C5: (49.472,106.122,95.976)
C4: (48.577,105.927,97.005)
P: (45.176,103.546,92.170)
C4': (44.232,104.644,95.812)
C2': (45.113,106.448,97.053)
O2': (44.324,106.321,98.216)
N1: (51.000,106.588,97.656)
N2: (50.415,106.540,99.883)
N3: (48.788,106.033,98.332)
N7: (48.866,105.911,94.748)
N9: (47.387,105.595,96.395)
O5': (44.970,104.364,93.525)
O3': (43.002,106.723,95.853)
OP2: (46.179,104.260,91.357)
C3': (44.314,106.160,95.785)
C1': (46.114,105.292,97.054)
C5': (43.988,103.960,94.486)
O6: (51.734,106.709,95.510)
O4': (45.503,104.217,96.363)
C8: (47.635,105.603,95.041)
C2: (50.035,106.376,98.609)
C6: (50.802,106.486,96.284)
C5: (49.472,106.122,95.976)
C4: (48.577,105.927,97.005)
P: (45.176,103.546,92.170)
C4': (44.232,104.644,95.812)
C2': (45.113,106.448,97.053)
O2': (44.324,106.321,98.216)
N1: (51.000,106.588,97.656)
N2: (50.415,106.540,99.883)
N3: (48.788,106.033,98.332)
N7: (48.866,105.911,94.748)
N9: (47.387,105.595,96.395)
O5': (44.970,104.364,93.525)
O3': (43.002,106.723,95.853)
C2: (56.841,112.770,101.647)
OP1: (53.725,107.831,96.760)
OP2: (56.075,107.648,97.771)
C4: (58.566,111.214,101.456)
O5': (54.342,109.103,98.780)
C3': (53.876,111.992,98.720)
C1': (54.511,112.179,100.978)
O4': (53.750,110.988,100.824)
C5': (53.009,109.604,98.982)
P: (54.607,107.774,97.949)
O2: (56.423,113.903,101.941)
C4': (53.066,111.003,99.540)
C2': (54.204,113.054,99.761)
O2': (53.089,113.863,100.089)
N1: (55.943,111.820,101.113)
N3: (58.143,112.429,101.814)
N4: (59.851,110.917,101.655)
C6: (56.400,110.584,100.736)
C5: (57.689,110.246,100.884)
O3': (53.121,112.479,97.620)
OP1: (53.725,107.831,96.760)
OP2: (56.075,107.648,97.771)
C4: (58.566,111.214,101.456)
O5': (54.342,109.103,98.780)
C3': (53.876,111.992,98.720)
C1': (54.511,112.179,100.978)
O4': (53.750,110.988,100.824)
C5': (53.009,109.604,98.982)
P: (54.607,107.774,97.949)
O2: (56.423,113.903,101.941)
C4': (53.066,111.003,99.540)
C2': (54.204,113.054,99.761)
O2': (53.089,113.863,100.089)
N1: (55.943,111.820,101.113)
N3: (58.143,112.429,101.814)
N4: (59.851,110.917,101.655)
C6: (56.400,110.584,100.736)
C5: (57.689,110.246,100.884)
O3': (53.121,112.479,97.620)
Image (generated by PyMOL):