ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:01046:01028

Extra

PDB:
ATOM 1 O3' A A1045 23.192 92.909 100.245 1.00 45.84 O
ATOM 2 P G A1046 23.293 91.441 99.592 1.00 49.40 P
ATOM 3 OP1 G A1046 21.902 90.948 99.475 1.00 51.38 O
ATOM 4 OP2 G A1046 24.297 90.604 100.272 1.00 49.86 O
ATOM 5 O5' G A1046 23.801 91.718 98.105 1.00 50.83 O
ATOM 6 C5' G A1046 25.146 92.157 97.847 1.00 48.77 C
ATOM 7 C4' G A1046 25.141 93.508 97.159 1.00 47.88 C
ATOM 8 O4' G A1046 26.497 94.006 97.085 1.00 47.80 O
ATOM 9 C3' G A1046 24.617 93.548 95.732 1.00 47.06 C
ATOM 10 O3' G A1046 24.161 94.865 95.452 1.00 46.70 O
ATOM 11 C2' G A1046 25.878 93.316 94.923 1.00 45.48 C
ATOM 12 O2' G A1046 25.712 93.847 93.626 1.00 47.06 O
ATOM 13 C1' G A1046 26.891 94.124 95.737 1.00 45.08 C
ATOM 14 N9 G A1046 28.288 93.706 95.662 1.00 42.28 N
ATOM 15 C8 G A1046 28.772 92.482 95.292 1.00 42.68 C
ATOM 16 N7 G A1046 30.072 92.411 95.336 1.00 42.98 N
ATOM 17 C5 G A1046 30.471 93.666 95.760 1.00 42.73 C
ATOM 18 C6 G A1046 31.769 94.188 95.984 1.00 42.55 C
ATOM 19 O6 G A1046 32.863 93.630 95.828 1.00 42.33 O
ATOM 20 N1 G A1046 31.718 95.506 96.423 1.00 40.90 N
ATOM 21 C2 G A1046 30.567 96.230 96.601 1.00 40.08 C
ATOM 22 N2 G A1046 30.721 97.480 97.024 1.00 40.99 N
ATOM 23 N3 G A1046 29.356 95.760 96.381 1.00 40.04 N
ATOM 24 C4 G A1046 29.381 94.478 95.968 1.00 41.63 C
ATOM 25 P A A1047 22.706 95.325 95.940 1.00 49.17 P
ATOM 26 OP1 A A1047 22.708 95.301 97.419 1.00 45.82 O
ATOM 27 OP2 A A1047 21.716 94.502 95.194 1.00 49.08 O
ATOM 28 O5' A A1047 22.602 96.833 95.440 1.00 46.15 O
TER

ATOM 1 O3' C B1027 35.617 94.981 97.641 1.00 38.25 O
ATOM 2 P C B1028 35.463 95.948 96.384 1.00 37.75 P
ATOM 3 OP1 C B1028 34.229 96.734 96.623 1.00 35.62 O
ATOM 4 OP2 C B1028 35.594 95.128 95.150 1.00 34.73 O
ATOM 5 O5' C B1028 36.717 96.914 96.514 1.00 35.20 O
ATOM 6 C5' C B1028 36.777 97.885 97.569 1.00 34.55 C
ATOM 7 C4' C B1028 38.066 98.664 97.498 1.00 34.67 C
ATOM 8 O4' C B1028 39.190 97.818 97.853 1.00 32.97 O
ATOM 9 C3' C B1028 38.438 99.193 96.123 1.00 33.94 C
ATOM 10 O3' C B1028 37.770 100.396 95.826 1.00 35.35 O
ATOM 11 C2' C B1028 39.920 99.433 96.289 1.00 32.85 C
ATOM 12 O2' C B1028 40.121 100.569 97.106 1.00 31.96 O
ATOM 13 C1' C B1028 40.318 98.190 97.076 1.00 32.17 C
ATOM 14 N1 C B1028 40.672 97.058 96.202 1.00 32.76 N
ATOM 15 C2 C B1028 41.935 97.033 95.602 1.00 32.64 C
ATOM 16 O2 C B1028 42.680 98.014 95.738 1.00 33.23 O
ATOM 17 N3 C B1028 42.304 95.945 94.878 1.00 32.21 N
ATOM 18 C4 C B1028 41.452 94.925 94.722 1.00 33.01 C
ATOM 19 N4 C B1028 41.856 93.858 94.030 1.00 29.75 N
ATOM 20 C5 C B1028 40.145 94.951 95.276 1.00 35.50 C
ATOM 21 C6 C B1028 39.797 96.028 96.000 1.00 34.98 C
ATOM 22 P A B1029 37.497 100.786 94.303 1.00 35.65 P
ATOM 23 OP1 A B1029 37.023 102.190 94.312 1.00 34.79 O
ATOM 24 OP2 A B1029 36.643 99.735 93.715 1.00 34.46 O
ATOM 25 O5' A B1029 38.940 100.732 93.631 1.00 34.86 O
TER

Atoms:
OP1: (21.902,90.948,99.475)
OP2: (24.297,90.604,100.272)
C3': (24.617,93.548,95.732)
C1': (26.891,94.124,95.737)
C5': (25.146,92.157,97.847)
O6: (32.863,93.630,95.828)
O4': (26.497,94.006,97.085)
C8: (28.772,92.482,95.292)
C2: (30.567,96.230,96.601)
C6: (31.769,94.188,95.984)
C5: (30.471,93.666,95.760)
C4: (29.381,94.478,95.968)
P: (23.293,91.441,99.592)
C4': (25.141,93.508,97.159)
C2': (25.878,93.316,94.923)
O2': (25.712,93.847,93.626)
N1: (31.718,95.506,96.423)
N2: (30.721,97.480,97.024)
N3: (29.356,95.760,96.381)
N7: (30.072,92.411,95.336)
N9: (28.288,93.706,95.662)
O5': (23.801,91.718,98.105)
O3': (24.161,94.865,95.452)
C2: (41.935,97.033,95.602)
OP1: (34.229,96.734,96.623)
OP2: (35.594,95.128,95.150)
C4: (41.452,94.925,94.722)
O5': (36.717,96.914,96.514)
C3': (38.438,99.193,96.123)
C1': (40.318,98.190,97.076)
O4': (39.190,97.818,97.853)
C5': (36.777,97.885,97.569)
P: (35.463,95.948,96.384)
O2: (42.680,98.014,95.738)
C4': (38.066,98.664,97.498)
C2': (39.920,99.433,96.289)
O2': (40.121,100.569,97.106)
N1: (40.672,97.058,96.202)
N3: (42.304,95.945,94.878)
N4: (41.856,93.858,94.030)
C6: (39.797,96.028,96.000)
C5: (40.145,94.951,95.276)
O3': (37.770,100.396,95.826)
Image (generated by PyMOL):
PyMOL image
show in jmol