Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0615:02375
Extra
PDB:
ATOM 1 O3' U A 614 46.010 102.246 93.131 1.00 32.65 O
ATOM 2 P G A 615 45.419 103.622 92.559 1.00 33.82 P
ATOM 3 OP1 G A 615 44.126 103.289 91.942 1.00 35.46 O
ATOM 4 OP2 G A 615 46.447 104.295 91.753 1.00 33.17 O
ATOM 5 O5' G A 615 45.132 104.492 93.860 1.00 32.05 O
ATOM 6 C5' G A 615 44.129 104.087 94.803 1.00 31.70 C
ATOM 7 C4' G A 615 44.361 104.753 96.135 1.00 32.89 C
ATOM 8 O4' G A 615 45.622 104.300 96.685 1.00 34.28 O
ATOM 9 C3' G A 615 44.468 106.269 96.112 1.00 32.40 C
ATOM 10 O3' G A 615 43.173 106.871 96.155 1.00 33.82 O
ATOM 11 C2' G A 615 45.268 106.536 97.380 1.00 32.40 C
ATOM 12 O2' G A 615 44.491 106.411 98.544 1.00 30.27 O
ATOM 13 C1' G A 615 46.252 105.365 97.371 1.00 34.09 C
ATOM 14 N9 G A 615 47.511 105.676 96.693 1.00 37.36 N
ATOM 15 C8 G A 615 47.744 105.696 95.339 1.00 37.20 C
ATOM 16 N7 G A 615 48.966 106.031 95.035 1.00 37.20 N
ATOM 17 C5 G A 615 49.578 106.240 96.259 1.00 37.25 C
ATOM 18 C6 G A 615 50.899 106.622 96.559 1.00 37.24 C
ATOM 19 O6 G A 615 51.824 106.849 95.780 1.00 38.77 O
ATOM 20 N1 G A 615 51.105 106.722 97.927 1.00 37.31 N
ATOM 21 C2 G A 615 50.154 106.474 98.886 1.00 39.90 C
ATOM 22 N2 G A 615 50.543 106.603 100.166 1.00 40.74 N
ATOM 23 N3 G A 615 48.912 106.119 98.616 1.00 38.57 N
ATOM 24 C4 G A 615 48.696 106.021 97.292 1.00 37.61 C
TER
ATOM 1 O3' C B2374 54.206 106.788 99.274 1.00 35.01 O
ATOM 2 P C B2375 54.836 107.900 98.311 1.00 38.38 P
ATOM 3 OP1 C B2375 54.041 107.972 97.071 1.00 37.45 O
ATOM 4 OP2 C B2375 56.291 107.657 98.227 1.00 40.80 O
ATOM 5 O5' C B2375 54.616 109.246 99.119 1.00 38.14 O
ATOM 6 C5' C B2375 53.293 109.706 99.416 1.00 40.82 C
ATOM 7 C4' C B2375 53.342 111.109 99.951 1.00 40.95 C
ATOM 8 O4' C B2375 54.019 111.104 101.234 1.00 43.22 O
ATOM 9 C3' C B2375 54.147 112.089 99.120 1.00 41.31 C
ATOM 10 O3' C B2375 53.397 112.575 98.009 1.00 41.59 O
ATOM 11 C2' C B2375 54.482 113.155 100.151 1.00 43.18 C
ATOM 12 O2' C B2375 53.368 113.963 100.469 1.00 46.47 O
ATOM 13 C1' C B2375 54.775 112.293 101.379 1.00 43.59 C
ATOM 14 N1 C B2375 56.198 111.932 101.517 1.00 46.00 N
ATOM 15 C2 C B2375 57.092 112.888 102.023 1.00 49.10 C
ATOM 16 O2 C B2375 56.663 114.024 102.320 1.00 51.88 O
ATOM 17 N3 C B2375 58.401 112.556 102.167 1.00 48.65 N
ATOM 18 C4 C B2375 58.823 111.340 101.816 1.00 48.34 C
ATOM 19 N4 C B2375 60.119 111.054 101.974 1.00 50.56 N
ATOM 20 C5 C B2375 57.938 110.359 101.288 1.00 48.24 C
ATOM 21 C6 C B2375 56.648 110.691 101.161 1.00 47.18 C
ATOM 22 P U B2376 54.008 112.473 96.523 1.00 39.11 P
ATOM 23 OP1 U B2376 52.899 112.648 95.569 1.00 40.19 O
ATOM 24 OP2 U B2376 54.814 111.237 96.462 1.00 41.14 O
ATOM 25 O5' U B2376 54.953 113.755 96.418 1.00 40.13 O
TER
ATOM 2 P G A 615 45.419 103.622 92.559 1.00 33.82 P
ATOM 3 OP1 G A 615 44.126 103.289 91.942 1.00 35.46 O
ATOM 4 OP2 G A 615 46.447 104.295 91.753 1.00 33.17 O
ATOM 5 O5' G A 615 45.132 104.492 93.860 1.00 32.05 O
ATOM 6 C5' G A 615 44.129 104.087 94.803 1.00 31.70 C
ATOM 7 C4' G A 615 44.361 104.753 96.135 1.00 32.89 C
ATOM 8 O4' G A 615 45.622 104.300 96.685 1.00 34.28 O
ATOM 9 C3' G A 615 44.468 106.269 96.112 1.00 32.40 C
ATOM 10 O3' G A 615 43.173 106.871 96.155 1.00 33.82 O
ATOM 11 C2' G A 615 45.268 106.536 97.380 1.00 32.40 C
ATOM 12 O2' G A 615 44.491 106.411 98.544 1.00 30.27 O
ATOM 13 C1' G A 615 46.252 105.365 97.371 1.00 34.09 C
ATOM 14 N9 G A 615 47.511 105.676 96.693 1.00 37.36 N
ATOM 15 C8 G A 615 47.744 105.696 95.339 1.00 37.20 C
ATOM 16 N7 G A 615 48.966 106.031 95.035 1.00 37.20 N
ATOM 17 C5 G A 615 49.578 106.240 96.259 1.00 37.25 C
ATOM 18 C6 G A 615 50.899 106.622 96.559 1.00 37.24 C
ATOM 19 O6 G A 615 51.824 106.849 95.780 1.00 38.77 O
ATOM 20 N1 G A 615 51.105 106.722 97.927 1.00 37.31 N
ATOM 21 C2 G A 615 50.154 106.474 98.886 1.00 39.90 C
ATOM 22 N2 G A 615 50.543 106.603 100.166 1.00 40.74 N
ATOM 23 N3 G A 615 48.912 106.119 98.616 1.00 38.57 N
ATOM 24 C4 G A 615 48.696 106.021 97.292 1.00 37.61 C
TER
ATOM 1 O3' C B2374 54.206 106.788 99.274 1.00 35.01 O
ATOM 2 P C B2375 54.836 107.900 98.311 1.00 38.38 P
ATOM 3 OP1 C B2375 54.041 107.972 97.071 1.00 37.45 O
ATOM 4 OP2 C B2375 56.291 107.657 98.227 1.00 40.80 O
ATOM 5 O5' C B2375 54.616 109.246 99.119 1.00 38.14 O
ATOM 6 C5' C B2375 53.293 109.706 99.416 1.00 40.82 C
ATOM 7 C4' C B2375 53.342 111.109 99.951 1.00 40.95 C
ATOM 8 O4' C B2375 54.019 111.104 101.234 1.00 43.22 O
ATOM 9 C3' C B2375 54.147 112.089 99.120 1.00 41.31 C
ATOM 10 O3' C B2375 53.397 112.575 98.009 1.00 41.59 O
ATOM 11 C2' C B2375 54.482 113.155 100.151 1.00 43.18 C
ATOM 12 O2' C B2375 53.368 113.963 100.469 1.00 46.47 O
ATOM 13 C1' C B2375 54.775 112.293 101.379 1.00 43.59 C
ATOM 14 N1 C B2375 56.198 111.932 101.517 1.00 46.00 N
ATOM 15 C2 C B2375 57.092 112.888 102.023 1.00 49.10 C
ATOM 16 O2 C B2375 56.663 114.024 102.320 1.00 51.88 O
ATOM 17 N3 C B2375 58.401 112.556 102.167 1.00 48.65 N
ATOM 18 C4 C B2375 58.823 111.340 101.816 1.00 48.34 C
ATOM 19 N4 C B2375 60.119 111.054 101.974 1.00 50.56 N
ATOM 20 C5 C B2375 57.938 110.359 101.288 1.00 48.24 C
ATOM 21 C6 C B2375 56.648 110.691 101.161 1.00 47.18 C
ATOM 22 P U B2376 54.008 112.473 96.523 1.00 39.11 P
ATOM 23 OP1 U B2376 52.899 112.648 95.569 1.00 40.19 O
ATOM 24 OP2 U B2376 54.814 111.237 96.462 1.00 41.14 O
ATOM 25 O5' U B2376 54.953 113.755 96.418 1.00 40.13 O
TER
Atoms:
OP1: (44.126,103.289,91.942)
OP2: (46.447,104.295,91.753)
C3': (44.468,106.269,96.112)
C1': (46.252,105.365,97.371)
C5': (44.129,104.087,94.803)
O6: (51.824,106.849,95.780)
O4': (45.622,104.300,96.685)
C8: (47.744,105.696,95.339)
C2: (50.154,106.474,98.886)
C6: (50.899,106.622,96.559)
C5: (49.578,106.240,96.259)
C4: (48.696,106.021,97.292)
P: (45.419,103.622,92.559)
C4': (44.361,104.753,96.135)
C2': (45.268,106.536,97.380)
O2': (44.491,106.411,98.544)
N1: (51.105,106.722,97.927)
N2: (50.543,106.603,100.166)
N3: (48.912,106.119,98.616)
N7: (48.966,106.031,95.035)
N9: (47.511,105.676,96.693)
O5': (45.132,104.492,93.860)
O3': (43.173,106.871,96.155)
OP2: (46.447,104.295,91.753)
C3': (44.468,106.269,96.112)
C1': (46.252,105.365,97.371)
C5': (44.129,104.087,94.803)
O6: (51.824,106.849,95.780)
O4': (45.622,104.300,96.685)
C8: (47.744,105.696,95.339)
C2: (50.154,106.474,98.886)
C6: (50.899,106.622,96.559)
C5: (49.578,106.240,96.259)
C4: (48.696,106.021,97.292)
P: (45.419,103.622,92.559)
C4': (44.361,104.753,96.135)
C2': (45.268,106.536,97.380)
O2': (44.491,106.411,98.544)
N1: (51.105,106.722,97.927)
N2: (50.543,106.603,100.166)
N3: (48.912,106.119,98.616)
N7: (48.966,106.031,95.035)
N9: (47.511,105.676,96.693)
O5': (45.132,104.492,93.860)
O3': (43.173,106.871,96.155)
C2: (57.092,112.888,102.023)
OP1: (54.041,107.972,97.071)
OP2: (56.291,107.657,98.227)
C4: (58.823,111.340,101.816)
O5': (54.616,109.246,99.119)
C3': (54.147,112.089,99.120)
C1': (54.775,112.293,101.379)
O4': (54.019,111.104,101.234)
C5': (53.293,109.706,99.416)
P: (54.836,107.900,98.311)
O2: (56.663,114.024,102.320)
C4': (53.342,111.109,99.951)
C2': (54.482,113.155,100.151)
O2': (53.368,113.963,100.469)
N1: (56.198,111.932,101.517)
N3: (58.401,112.556,102.167)
N4: (60.119,111.054,101.974)
C6: (56.648,110.691,101.161)
C5: (57.938,110.359,101.288)
O3': (53.397,112.575,98.009)
OP1: (54.041,107.972,97.071)
OP2: (56.291,107.657,98.227)
C4: (58.823,111.340,101.816)
O5': (54.616,109.246,99.119)
C3': (54.147,112.089,99.120)
C1': (54.775,112.293,101.379)
O4': (54.019,111.104,101.234)
C5': (53.293,109.706,99.416)
P: (54.836,107.900,98.311)
O2: (56.663,114.024,102.320)
C4': (53.342,111.109,99.951)
C2': (54.482,113.155,100.151)
O2': (53.368,113.963,100.469)
N1: (56.198,111.932,101.517)
N3: (58.401,112.556,102.167)
N4: (60.119,111.054,101.974)
C6: (56.648,110.691,101.161)
C5: (57.938,110.359,101.288)
O3': (53.397,112.575,98.009)
Image (generated by PyMOL):